Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198410
Identifier: 87198410
GI number: 87198410
Start: 422876
End: 423853
Strand: Direct
Name: 87198410
Synonym: Saro_0385
Alternate gene names: NA
Gene position: 422876-423853 (Clockwise)
Preceding gene: 87198409
Following gene: 87198413
Centisome position: 11.87
GC content: 67.38
Gene sequence:
>978_bases ATGCGCTACCTGCTGACCCTGCTGAAGACGAGACTGTCCAGACAACCCGCAGGCGGCAGGTCCGCCCTGGTCTGGGTGAT CACGCTGATGGGCCTCGCGCTTGCCGTGGTCGCACATTCGGTTCTCGGCAGTACCAGTCAAGTGTTGCCGGCACGCAAGA CGGCCATGGAGCAGGTCGTCGGCGAGAGCCGTGCCGCAGAGGCCGGCGCGCCGCAGGGACTGCAAGCGGAACTCGAGCAA CTCGCAGAACGAATGCCGGGCCGGAACGCGGTGCTGGTGCGGTCGGTCAGCGATGGCTGGGTGGCGGGCTTTCGCGGTGC GACGTCCTTTCCTCAGGGCAGCTTGCGGCGCATCTGGCTCGGGGCGGTCCTGCTCGAAGCCGTCGATCAGGGCGAACTCT CGCTCGATCAGCGCGTCCCTTTGCAGACAAGAGCGCGTGGTCCGGAACGGCATGAGCAGGTCAGCGCCCTCTTGCGGAAG GCCGTCGCCCAAGATGACCGCTCGGCCCAGGACGAAATTCTTGCTGGCTTGATGGGGCCGTCTGGCATGGCGGCATGGCT CGAACGTCGCGGGTTCGGCGAAGTTGCCTTCGGACCATCGAACCGGGACCTGGTCCGGCTGCCGCAAGGCAAGGCGGCCG AGGGCGGGCCGCCCGACGGCGCGACGCCCGATGGAATGGCCTTCGCGCTGGGCGAGCTGTTTGCCGGCAGGGTTCTCAAG GAGGACTCGACCGCACACCTGTTGCAGTTGCTCGAACAGGACGGTTCAAGCGCAGAAAGGGCAGGCTGGCTGGTCTCGCG GCTGACCGGGGCTTCCCCGCTTACCGGCCCGGCTGCCTCTGCGGGCGCGGTTGCCTTCCTTCGCGCCCGGACCGGGCAGC GTTATGTGGTCGTCGTTTCCACGTCAGGCGCAGGCAATCCCCGCTCGATCAGCGACAGGTTGCTCACCGATGTGATCGCG GCACTCCGGCGGTACTGA
Upstream 100 bases:
>100_bases CTGTCATTTCTGGCCATGCCTCGGGTAAAGCCGCCCCGCACCGGCGGCACCTAAAAAGCCCATAGTAACTGTCCTGCGCA AATGGGCCGATCAGGCGCCA
Downstream 100 bases:
>100_bases TTACCCTGCGTCGCGGACAATGAGGCGATAGCCCAGGCCCGGCTCGGTCACGATCAGTTCGGGCTCGGACGGATTTTCCT CGAGCTTCTGGCGCAGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Protein; Beta-Lactamase Class A
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MRYLLTLLKTRLSRQPAGGRSALVWVITLMGLALAVVAHSVLGSTSQVLPARKTAMEQVVGESRAAEAGAPQGLQAELEQ LAERMPGRNAVLVRSVSDGWVAGFRGATSFPQGSLRRIWLGAVLLEAVDQGELSLDQRVPLQTRARGPERHEQVSALLRK AVAQDDRSAQDEILAGLMGPSGMAAWLERRGFGEVAFGPSNRDLVRLPQGKAAEGGPPDGATPDGMAFALGELFAGRVLK EDSTAHLLQLLEQDGSSAERAGWLVSRLTGASPLTGPAASAGAVAFLRARTGQRYVVVVSTSGAGNPRSISDRLLTDVIA ALRRY
Sequences:
>Translated_325_residues MRYLLTLLKTRLSRQPAGGRSALVWVITLMGLALAVVAHSVLGSTSQVLPARKTAMEQVVGESRAAEAGAPQGLQAELEQ LAERMPGRNAVLVRSVSDGWVAGFRGATSFPQGSLRRIWLGAVLLEAVDQGELSLDQRVPLQTRARGPERHEQVSALLRK AVAQDDRSAQDEILAGLMGPSGMAAWLERRGFGEVAFGPSNRDLVRLPQGKAAEGGPPDGATPDGMAFALGELFAGRVLK EDSTAHLLQLLEQDGSSAERAGWLVSRLTGASPLTGPAASAGAVAFLRARTGQRYVVVVSTSGAGNPRSISDRLLTDVIA ALRRY >Mature_325_residues MRYLLTLLKTRLSRQPAGGRSALVWVITLMGLALAVVAHSVLGSTSQVLPARKTAMEQVVGESRAAEAGAPQGLQAELEQ LAERMPGRNAVLVRSVSDGWVAGFRGATSFPQGSLRRIWLGAVLLEAVDQGELSLDQRVPLQTRARGPERHEQVSALLRK AVAQDDRSAQDEILAGLMGPSGMAAWLERRGFGEVAFGPSNRDLVRLPQGKAAEGGPPDGATPDGMAFALGELFAGRVLK EDSTAHLLQLLEQDGSSAERAGWLVSRLTGASPLTGPAASAGAVAFLRARTGQRYVVVVSTSGAGNPRSISDRLLTDVIA ALRRY
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34357; Mature: 34357
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLLTLLKTRLSRQPAGGRSALVWVITLMGLALAVVAHSVLGSTSQVLPARKTAMEQVV CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GESRAAEAGAPQGLQAELEQLAERMPGRNAVLVRSVSDGWVAGFRGATSFPQGSLRRIWL HHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHCCCCCCCCCCCHHHHHHH GAVLLEAVDQGELSLDQRVPLQTRARGPERHEQVSALLRKAVAQDDRSAQDEILAGLMGP HHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC SGMAAWLERRGFGEVAFGPSNRDLVRLPQGKAAEGGPPDGATPDGMAFALGELFAGRVLK CHHHHHHHHCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC EDSTAHLLQLLEQDGSSAERAGWLVSRLTGASPLTGPAASAGAVAFLRARTGQRYVVVVS CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEE TSGAGNPRSISDRLLTDVIAALRRY CCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRYLLTLLKTRLSRQPAGGRSALVWVITLMGLALAVVAHSVLGSTSQVLPARKTAMEQVV CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GESRAAEAGAPQGLQAELEQLAERMPGRNAVLVRSVSDGWVAGFRGATSFPQGSLRRIWL HHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHCCCCCCCCCCCHHHHHHH GAVLLEAVDQGELSLDQRVPLQTRARGPERHEQVSALLRKAVAQDDRSAQDEILAGLMGP HHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC SGMAAWLERRGFGEVAFGPSNRDLVRLPQGKAAEGGPPDGATPDGMAFALGELFAGRVLK CHHHHHHHHCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC EDSTAHLLQLLEQDGSSAERAGWLVSRLTGASPLTGPAASAGAVAFLRARTGQRYVVVVS CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEE TSGAGNPRSISDRLLTDVIAALRRY CCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA