Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198375

Identifier: 87198375

GI number: 87198375

Start: 376858

End: 378921

Strand: Direct

Name: 87198375

Synonym: Saro_0350

Alternate gene names: NA

Gene position: 376858-378921 (Clockwise)

Preceding gene: 87198374

Following gene: 87198376

Centisome position: 10.58

GC content: 64.73

Gene sequence:

>2064_bases
ATGCTTGCCGAGATGGCCTATTCGCGGGCCGACGAAGCAGCGGGTGCGTCTAACCCGAGTGCAATTGATCTCAGCGGATC
GTTCTACGCCAATCTTTCCGCATGCCGTGCAGCTGCCCGGGCCTATTTCCGCTTCTGCAATTCTGAGGCTCGTCCACAGG
GCAGGTTTGGCGAGCTCGACCGGGAGGCAGTTCTCGAGGCGGTGGCCGCATGTGACGCCGTTGGCGACGTCGCCCAGTAT
GTCGCTGATCTCGATCTCGGGCAGCCGACCAGATACTGGCTCGTTCTGGACGGCAAGCGCTACCCCAGCAAAGCCGTCGT
ACGCGATGCTTTGGCGAGACGCGGCAGTGACTGGCTGCCTGGCGGCGGTGAATGCAAGACCGCGCTCGAGCGCCTCGGCT
TTGTCGTCATCGACTGGCCCGAACTCAACCGCGCTCGCGATGCATTCCTGCGCCAGATGCCGGATTTCAGCGATTTCCGT
GCCGCTGCCGGCGCCTACTGGGATGTGGAACGCGCCTACAAGAACGGACTGATCGAGCAGGCCAAGGCAATCATTGCACG
GCAGGATGACGACCGCGCGGTTGGCGAAAGCCTCTACCGGCTGCTTTCGGTGGGCGGTTCGGGCCTGCCGCTGAGCTGGC
GGACACTGTCCGAAGTCCAGAACGCCGATCCCGAGCTGCGCGACCGTTTCTACACCTCGCTGGGGGTGCTTGCTCGCAGC
GATGGCCCGCTCGAAGAAGCTGTCCCGGCCGCGGCGCGCGAGCTCGAAGCCCTGCGTGAAGCGGGCATTGCAGGGCTGCG
CCGGGGCGAGGTGCTCTCCATTCCGATTACCGTCTGGGCCACTTTGCACCCCGACCAGGCGAGTTGGTTCAAGATCGCCA
AGATCGACGAGATGGGGCGGCGGTTGTTCGGTCGCAGGCTGTTCCCGCAAACCGAGTTCCGCGACGCTGATCTTGCCGAA
TGGCTGCAGTTGATGCGGGCGCTGCTCGGGTTGCTCGATAAGGAATTCGGGTGGCACCCGCATGACCTGTTCGATGTGCA
GGGGTTCATCTGGGTGGTCGGCAATCCGGATTCCCCCCGCGAACTCGATCCGGTGCCCGTCTGGATGGTGACCTCGCTGT
GGGGGCAAGAGGACGGCTTGCCGCGCTTCGTCGAGCGGGCAGAGTGGAGTTTGCTCACTGACACCGGCAGCGCGAACAAC
CGCCGCGTCCGCGAGATGCAGGTCGGTGACCGGATCTTCCTCAAGGATTTCGTGCCGCGCGCCCGCGATCTGCCCTTCGA
TGCCGGAACGGGGATCATGGCGGCGGCGACCGTGTTCCTGGCCCGTCACACCCGCTCGCTCGCCACCCGGCGCACGCTTG
ACGAGTTGAGACATGCTCTGGCCGATATCCCGCTGATGCCAATCACGCGGCTGCCGTGGCAAGCGGTGCGGATTGATCGC
ACCAACCGGCGCTGGGAGGCGCTGTTCCGGCTCGCCCGCCTGCTGCTTCAGCGCGACTGGCAGGCTACTCACCATCACGC
CAAGGCCCCTGATGGTCTGACCCTGCTTTTTCCAATGAACGACCTGTTCGAGAAATACATCGCTGTGCTGCTTCGCCGGG
CGCTGGCGGGGAGCGGGATCGAGGTGATCGACCAGGGCGGCCACCGCGCCTGCCTTGGCTCCTTTACTGGCGGGCATCTC
GAGACCGGCGAGGTGTTCCGCACCAAACCTGACATCATGTTGCGCCGTGGTCGCGAAATTGTGGCCATCATCGATACCAA
GTGGAAGAAGCTCAGCCTCGACCCGCTCGACCGCAAGCACGGGGTTAGCCAGGCTGATGTCTATCAGCTCATGGCCTATG
CGCGGCTCTACCAGACGGCCGAGCTGATGCTACTTTACCCGGCGCGACCGGGGCAGGTGTGCGCAGAGCGCGCACAGTTC
GGCATGGCGGGCGGGAGCGAGCGCCTCAGAATCGCGATGGCTGACGTCTCGCTGGACGAGAAGGCTCTGGCAGAGGCTCT
CGGAGTGCTGGTGATGGCGCCCGCCGTCACCAAGGCTTCGCCATTGCCGCAGGCGGTGGGGTAG

Upstream 100 bases:

>100_bases
TTATGCGCCGACATCCATTGCCACGTGGCTCTCGGACGGACGCAAGGTTGACGGCGCTTATGGTCTAGATGAGCACTTTG
ATCGGGACGGCGGTGCTTCG

Downstream 100 bases:

>100_bases
CGAAGCGCGATGGCACGTAACGCGAAGCTCGACCGGCTGCTGACGCTGGTCAAGGCGCTGGGAGAAAGCGCAGAAGGCTT
GACCCTCGACGAGATGGCAG

Product: McrBC 5-methylcytosine restriction system component-like

Products: NA

Alternate protein names: McrBC Restriction Endonuclease System Subunit McrC; McrBC 5-Methylcytosine Restriction System Component-Like

Number of amino acids: Translated: 687; Mature: 687

Protein sequence:

>687_residues
MLAEMAYSRADEAAGASNPSAIDLSGSFYANLSACRAAARAYFRFCNSEARPQGRFGELDREAVLEAVAACDAVGDVAQY
VADLDLGQPTRYWLVLDGKRYPSKAVVRDALARRGSDWLPGGGECKTALERLGFVVIDWPELNRARDAFLRQMPDFSDFR
AAAGAYWDVERAYKNGLIEQAKAIIARQDDDRAVGESLYRLLSVGGSGLPLSWRTLSEVQNADPELRDRFYTSLGVLARS
DGPLEEAVPAAARELEALREAGIAGLRRGEVLSIPITVWATLHPDQASWFKIAKIDEMGRRLFGRRLFPQTEFRDADLAE
WLQLMRALLGLLDKEFGWHPHDLFDVQGFIWVVGNPDSPRELDPVPVWMVTSLWGQEDGLPRFVERAEWSLLTDTGSANN
RRVREMQVGDRIFLKDFVPRARDLPFDAGTGIMAAATVFLARHTRSLATRRTLDELRHALADIPLMPITRLPWQAVRIDR
TNRRWEALFRLARLLLQRDWQATHHHAKAPDGLTLLFPMNDLFEKYIAVLLRRALAGSGIEVIDQGGHRACLGSFTGGHL
ETGEVFRTKPDIMLRRGREIVAIIDTKWKKLSLDPLDRKHGVSQADVYQLMAYARLYQTAELMLLYPARPGQVCAERAQF
GMAGGSERLRIAMADVSLDEKALAEALGVLVMAPAVTKASPLPQAVG

Sequences:

>Translated_687_residues
MLAEMAYSRADEAAGASNPSAIDLSGSFYANLSACRAAARAYFRFCNSEARPQGRFGELDREAVLEAVAACDAVGDVAQY
VADLDLGQPTRYWLVLDGKRYPSKAVVRDALARRGSDWLPGGGECKTALERLGFVVIDWPELNRARDAFLRQMPDFSDFR
AAAGAYWDVERAYKNGLIEQAKAIIARQDDDRAVGESLYRLLSVGGSGLPLSWRTLSEVQNADPELRDRFYTSLGVLARS
DGPLEEAVPAAARELEALREAGIAGLRRGEVLSIPITVWATLHPDQASWFKIAKIDEMGRRLFGRRLFPQTEFRDADLAE
WLQLMRALLGLLDKEFGWHPHDLFDVQGFIWVVGNPDSPRELDPVPVWMVTSLWGQEDGLPRFVERAEWSLLTDTGSANN
RRVREMQVGDRIFLKDFVPRARDLPFDAGTGIMAAATVFLARHTRSLATRRTLDELRHALADIPLMPITRLPWQAVRIDR
TNRRWEALFRLARLLLQRDWQATHHHAKAPDGLTLLFPMNDLFEKYIAVLLRRALAGSGIEVIDQGGHRACLGSFTGGHL
ETGEVFRTKPDIMLRRGREIVAIIDTKWKKLSLDPLDRKHGVSQADVYQLMAYARLYQTAELMLLYPARPGQVCAERAQF
GMAGGSERLRIAMADVSLDEKALAEALGVLVMAPAVTKASPLPQAVG
>Mature_687_residues
MLAEMAYSRADEAAGASNPSAIDLSGSFYANLSACRAAARAYFRFCNSEARPQGRFGELDREAVLEAVAACDAVGDVAQY
VADLDLGQPTRYWLVLDGKRYPSKAVVRDALARRGSDWLPGGGECKTALERLGFVVIDWPELNRARDAFLRQMPDFSDFR
AAAGAYWDVERAYKNGLIEQAKAIIARQDDDRAVGESLYRLLSVGGSGLPLSWRTLSEVQNADPELRDRFYTSLGVLARS
DGPLEEAVPAAARELEALREAGIAGLRRGEVLSIPITVWATLHPDQASWFKIAKIDEMGRRLFGRRLFPQTEFRDADLAE
WLQLMRALLGLLDKEFGWHPHDLFDVQGFIWVVGNPDSPRELDPVPVWMVTSLWGQEDGLPRFVERAEWSLLTDTGSANN
RRVREMQVGDRIFLKDFVPRARDLPFDAGTGIMAAATVFLARHTRSLATRRTLDELRHALADIPLMPITRLPWQAVRIDR
TNRRWEALFRLARLLLQRDWQATHHHAKAPDGLTLLFPMNDLFEKYIAVLLRRALAGSGIEVIDQGGHRACLGSFTGGHL
ETGEVFRTKPDIMLRRGREIVAIIDTKWKKLSLDPLDRKHGVSQADVYQLMAYARLYQTAELMLLYPARPGQVCAERAQF
GMAGGSERLRIAMADVSLDEKALAEALGVLVMAPAVTKASPLPQAVG

Specific function: Unknown

COG id: COG4268

COG function: function code V; McrBC 5-methylcytosine restriction system component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76601; Mature: 76601

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAEMAYSRADEAAGASNPSAIDLSGSFYANLSACRAAARAYFRFCNSEARPQGRFGELD
CCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
REAVLEAVAACDAVGDVAQYVADLDLGQPTRYWLVLDGKRYPSKAVVRDALARRGSDWLP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCC
GGGECKTALERLGFVVIDWPELNRARDAFLRQMPDFSDFRAAAGAYWDVERAYKNGLIEQ
CCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCHHHH
AKAIIARQDDDRAVGESLYRLLSVGGSGLPLSWRTLSEVQNADPELRDRFYTSLGVLARS
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC
DGPLEEAVPAAARELEALREAGIAGLRRGEVLSIPITVWATLHPDQASWFKIAKIDEMGR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCCEEHHHHHHHHH
RLFGRRLFPQTEFRDADLAEWLQLMRALLGLLDKEFGWHPHDLFDVQGFIWVVGNPDSPR
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEECCCCCC
ELDPVPVWMVTSLWGQEDGLPRFVERAEWSLLTDTGSANNRRVREMQVGDRIFLKDFVPR
CCCCCCHHHHHHHHCCCCCCHHHHHHCCCEEEECCCCCCCCEEHHHHCCCCHHHHHHCCH
ARDLPFDAGTGIMAAATVFLARHTRSLATRRTLDELRHALADIPLMPITRLPWQAVRIDR
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
TNRRWEALFRLARLLLQRDWQATHHHAKAPDGLTLLFPMNDLFEKYIAVLLRRALAGSGI
CCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCC
EVIDQGGHRACLGSFTGGHLETGEVFRTKPDIMLRRGREIVAIIDTKWKKLSLDPLDRKH
CEEECCCCEEEECCCCCCCCCCCCHHCCCCHHHHHCCCEEEEEEECCCCCCCCCCCHHHC
GVSQADVYQLMAYARLYQTAELMLLYPARPGQVCAERAQFGMAGGSERLRIAMADVSLDE
CCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCH
KALAEALGVLVMAPAVTKASPLPQAVG
HHHHHHHHHHHHCCCHHCCCCCCCCCC
>Mature Secondary Structure
MLAEMAYSRADEAAGASNPSAIDLSGSFYANLSACRAAARAYFRFCNSEARPQGRFGELD
CCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
REAVLEAVAACDAVGDVAQYVADLDLGQPTRYWLVLDGKRYPSKAVVRDALARRGSDWLP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCC
GGGECKTALERLGFVVIDWPELNRARDAFLRQMPDFSDFRAAAGAYWDVERAYKNGLIEQ
CCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCHHHH
AKAIIARQDDDRAVGESLYRLLSVGGSGLPLSWRTLSEVQNADPELRDRFYTSLGVLARS
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC
DGPLEEAVPAAARELEALREAGIAGLRRGEVLSIPITVWATLHPDQASWFKIAKIDEMGR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCCCEEHHHHHHHHH
RLFGRRLFPQTEFRDADLAEWLQLMRALLGLLDKEFGWHPHDLFDVQGFIWVVGNPDSPR
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEECCCCCC
ELDPVPVWMVTSLWGQEDGLPRFVERAEWSLLTDTGSANNRRVREMQVGDRIFLKDFVPR
CCCCCCHHHHHHHHCCCCCCHHHHHHCCCEEEECCCCCCCCEEHHHHCCCCHHHHHHCCH
ARDLPFDAGTGIMAAATVFLARHTRSLATRRTLDELRHALADIPLMPITRLPWQAVRIDR
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC
TNRRWEALFRLARLLLQRDWQATHHHAKAPDGLTLLFPMNDLFEKYIAVLLRRALAGSGI
CCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCC
EVIDQGGHRACLGSFTGGHLETGEVFRTKPDIMLRRGREIVAIIDTKWKKLSLDPLDRKH
CEEECCCCEEEECCCCCCCCCCCCHHCCCCHHHHHCCCEEEEEEECCCCCCCCCCCHHHC
GVSQADVYQLMAYARLYQTAELMLLYPARPGQVCAERAQFGMAGGSERLRIAMADVSLDE
CCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCH
KALAEALGVLVMAPAVTKASPLPQAVG
HHHHHHHHHHHHCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA