Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198373
Identifier: 87198373
GI number: 87198373
Start: 374343
End: 375047
Strand: Direct
Name: 87198373
Synonym: Saro_0348
Alternate gene names: NA
Gene position: 374343-375047 (Clockwise)
Preceding gene: 87198371
Following gene: 87198374
Centisome position: 10.51
GC content: 63.4
Gene sequence:
>705_bases ATGATGCCGGTGAAAGATCCACTCCACCCTGACCGCCTCAAGAATAAGCAACGCGCTCTGCGTGACGGCTTTGCGCTGCC CCTGACCTTGCGCGTGCACCGGGCGCTCAGCTGGCTGCTGCGCGCTCAGCGCGAGGAGGATGACTTCGATACCCGTTTCA TCATGCTGTGGATCGGCTTCAATGCGGCCTACGCTGGTGACCTCGAACGTGCCCTGGATGACGAGGGGGATGGCCGCCGC CCTGGGGCTGCCAGCGAGCGGGAGCGCTTCGACGGTTTCTTCCGCGATCTCGTGAGGCTCGATACGGACGGACGTCTCTA CAAGGCGCTGTGGACGCGGTTCCCGCAGGAAATCCGCATTCTCCTCGACAATCGCTTCGTCTTCGCGCCATTCTGGAAGC ATCACGCGGGGCTGCCGGGCGGGGCGGGTTGGGAGATCACCTTCGAGGCCGCCAAGCGTGCAGCCAACGCCGCGCTGGCG GCGGGCAACACTCCGGTGGTTCTCTCGATCCTGTTCGACCGGCTCTATGTCCTGCGCAACCAGTTGCTGCATGGCGGAGC GACCTGGAATAGCGCTGCCAATCGTGCGCAAGTGCGAGACGGCGCTGCGATTCTGGGCCACCTCCTGCCGCTGTTCATCG ATCTGATGATGGATAACCCGGACGAGGATTGGGCGATGCCGCTCTATCCCGTCATTGAGGAATGA
Upstream 100 bases:
>100_bases CTTCGCTGCCGGTGTCGGACACCTCTCCATGTGTTCTAAAGAAGCATCTAGTCACAAGAGTTAAATCTTGTCCGGGCTGT ATTTCTCGAACACTATCCCG
Downstream 100 bases:
>100_bases ATGACCGTTTCTGTCGCATCATCGCTGCAGGAATCACAGCATGACGCAAATTCGCACCGCCACTCGCCGTTTTGGCCTGT CCAAATCCAAGATCACCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MMPVKDPLHPDRLKNKQRALRDGFALPLTLRVHRALSWLLRAQREEDDFDTRFIMLWIGFNAAYAGDLERALDDEGDGRR PGAASERERFDGFFRDLVRLDTDGRLYKALWTRFPQEIRILLDNRFVFAPFWKHHAGLPGGAGWEITFEAAKRAANAALA AGNTPVVLSILFDRLYVLRNQLLHGGATWNSAANRAQVRDGAAILGHLLPLFIDLMMDNPDEDWAMPLYPVIEE
Sequences:
>Translated_234_residues MMPVKDPLHPDRLKNKQRALRDGFALPLTLRVHRALSWLLRAQREEDDFDTRFIMLWIGFNAAYAGDLERALDDEGDGRR PGAASERERFDGFFRDLVRLDTDGRLYKALWTRFPQEIRILLDNRFVFAPFWKHHAGLPGGAGWEITFEAAKRAANAALA AGNTPVVLSILFDRLYVLRNQLLHGGATWNSAANRAQVRDGAAILGHLLPLFIDLMMDNPDEDWAMPLYPVIEE >Mature_234_residues MMPVKDPLHPDRLKNKQRALRDGFALPLTLRVHRALSWLLRAQREEDDFDTRFIMLWIGFNAAYAGDLERALDDEGDGRR PGAASERERFDGFFRDLVRLDTDGRLYKALWTRFPQEIRILLDNRFVFAPFWKHHAGLPGGAGWEITFEAAKRAANAALA AGNTPVVLSILFDRLYVLRNQLLHGGATWNSAANRAQVRDGAAILGHLLPLFIDLMMDNPDEDWAMPLYPVIEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26678; Mature: 26678
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPVKDPLHPDRLKNKQRALRDGFALPLTLRVHRALSWLLRAQREEDDFDTRFIMLWIGF CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC NAAYAGDLERALDDEGDGRRPGAASERERFDGFFRDLVRLDTDGRLYKALWTRFPQEIRI CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHH LLDNRFVFAPFWKHHAGLPGGAGWEITFEAAKRAANAALAAGNTPVVLSILFDRLYVLRN HHCCCEEEEEHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH QLLHGGATWNSAANRAQVRDGAAILGHLLPLFIDLMMDNPDEDWAMPLYPVIEE HHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMPVKDPLHPDRLKNKQRALRDGFALPLTLRVHRALSWLLRAQREEDDFDTRFIMLWIGF CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC NAAYAGDLERALDDEGDGRRPGAASERERFDGFFRDLVRLDTDGRLYKALWTRFPQEIRI CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHH LLDNRFVFAPFWKHHAGLPGGAGWEITFEAAKRAANAALAAGNTPVVLSILFDRLYVLRN HHCCCEEEEEHHHHHCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH QLLHGGATWNSAANRAQVRDGAAILGHLLPLFIDLMMDNPDEDWAMPLYPVIEE HHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA