Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87198371

Identifier: 87198371

GI number: 87198371

Start: 372308

End: 373762

Strand: Direct

Name: 87198371

Synonym: Saro_0346

Alternate gene names: NA

Gene position: 372308-373762 (Clockwise)

Preceding gene: 87198362

Following gene: 87198373

Centisome position: 10.45

GC content: 61.92

Gene sequence:

>1455_bases
ATGAGCGAACCTGAAGACGCATCCGATCCGCAGACGAACCAGAACGAACCGCAGTCGGAGCGAGACGTCGACGAAAGCCT
GCCCGCTCGGGACATCCTCAAGATAGGTTCTATGGTGAAAGCGCTGGGTGCCCAGCAGAGCAAGTTCGATGCGGTCACGA
GGTTGGCCCAGGTAGGCGCCCATGCCCAGCTGAGCACCAGCGCCCAGATGTTGGCCCTGTCAGACAAGGTTTCTGCGCTC
ACCAACATCGGCGCGACGAGCAGGCTTGCCCGGATGCTAGAAGAGACAAACCGGCATTCACGCCATCTGCAGGATATGAC
CAGCACCGCGCGCCTGCTCGCGCAGAGCGGTAAACTTGCGCAATACTCAAAACTGGCGGCCCTCGCGAGCGGCTATCCAG
GCAGCACGCTGCCGAACTGGGCGATCCTTAACGACCATTCGAATATCGATCAGTTGATGCGCTCGCAGCGCTGGGCCGAT
CATTTCTCGGCCGACTCCTTTGGCTATGCAACGGGCCGCGCCGGCAGGTTCGCAACCGGCGGGCTTGTTAGCGAGCAGCT
TCGGCTCGTGGCGGAACGCGCAGCCGGCATCAGGGTCGCCGCTGGGATAGGTGCGCTGCAGGTTTCGCCAGGGGTCAAGG
CGATGCTGGCCCGCAATGTCCGTATCGGCGAAACACTCTCCAAACTTTCCGCTTTCGCTGGCGCCATCGATACGATCGGC
GCGTTCAGTCCGGCGAGCAGCGCAGCCGTGGATTCGCTGCTTGGCGAATGGCAGACCCGACCTGACCTACCCGAAGAATT
CTGGCACCGCCGTTCGGTCCGTCAGCGTTACTATGAGGAAGCAGAGGTCGACCGCGGCCTCATCGACACCCGCAACACCG
AGATCGTCGAGGTTCTCGTTGAGAGCGGACTTGTCGAGGGCTACGTTCGCGGAAAGCGCGTTACCGCCGTGCTTGAGGCC
GGCCCGCTGAGCGTCGAGGTGTCGGCCTCGCGCACGCGCATCGGAACCTATCGGGCGATCACCGGCTTTGAAATCGCGAT
GCGCGGCCTCGTCAGGCGAGTGCTCGTGCAAGCCCAGATCGACGCTGGCGAAAACCCGGACGCGTGGTTCAAACAGCGCG
TTCCCGGCGATATTCTACAGCGAGCAAAAGAGCGCAAGGCAGATGCCGAACGCGTGGGCGAACAGGCAGCCGATCTCATA
GCGTTTGTCGACTTGGGCGATCTGATCCCAATCGTGACGCTTAAAAAGAACTGGCCGGTATTCCAGCCGATCTTCGGCAA
CGCGGAGGATTTCCGGGTGGACATGCGCCGCCTGAACGCGATCCGCAGGCCCGCAATGCACTCCCGTTCGATCGATCCTG
TCCAGTTCACCGAGATGGTCATCGTCATCGACCGCATCAGCTCCATGATACGGGGCAGCTTTGGCTGGATGGCCGAGTGG
GACGAAGAGGGCTGA

Upstream 100 bases:

>100_bases
ATCTTCATCGGCAGAGAAAGCAAAAGCTCGCTTTCATGCTGCGCTTAGCCCGCCGTTCAGCTAGCATCGCGCGGCGAGAC
AAGGGAAGAATCCGCAGTAC

Downstream 100 bases:

>100_bases
CGGTGGGCCTGCCCGCCGGCCGCCGGATGAGATTGAGGTCTTCGCGCTGGGTTTCGATCGCGGGGAAGATCGCCTTGAGA
TAGTCGATGAACCACATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MSEPEDASDPQTNQNEPQSERDVDESLPARDILKIGSMVKALGAQQSKFDAVTRLAQVGAHAQLSTSAQMLALSDKVSAL
TNIGATSRLARMLEETNRHSRHLQDMTSTARLLAQSGKLAQYSKLAALASGYPGSTLPNWAILNDHSNIDQLMRSQRWAD
HFSADSFGYATGRAGRFATGGLVSEQLRLVAERAAGIRVAAGIGALQVSPGVKAMLARNVRIGETLSKLSAFAGAIDTIG
AFSPASSAAVDSLLGEWQTRPDLPEEFWHRRSVRQRYYEEAEVDRGLIDTRNTEIVEVLVESGLVEGYVRGKRVTAVLEA
GPLSVEVSASRTRIGTYRAITGFEIAMRGLVRRVLVQAQIDAGENPDAWFKQRVPGDILQRAKERKADAERVGEQAADLI
AFVDLGDLIPIVTLKKNWPVFQPIFGNAEDFRVDMRRLNAIRRPAMHSRSIDPVQFTEMVIVIDRISSMIRGSFGWMAEW
DEEG

Sequences:

>Translated_484_residues
MSEPEDASDPQTNQNEPQSERDVDESLPARDILKIGSMVKALGAQQSKFDAVTRLAQVGAHAQLSTSAQMLALSDKVSAL
TNIGATSRLARMLEETNRHSRHLQDMTSTARLLAQSGKLAQYSKLAALASGYPGSTLPNWAILNDHSNIDQLMRSQRWAD
HFSADSFGYATGRAGRFATGGLVSEQLRLVAERAAGIRVAAGIGALQVSPGVKAMLARNVRIGETLSKLSAFAGAIDTIG
AFSPASSAAVDSLLGEWQTRPDLPEEFWHRRSVRQRYYEEAEVDRGLIDTRNTEIVEVLVESGLVEGYVRGKRVTAVLEA
GPLSVEVSASRTRIGTYRAITGFEIAMRGLVRRVLVQAQIDAGENPDAWFKQRVPGDILQRAKERKADAERVGEQAADLI
AFVDLGDLIPIVTLKKNWPVFQPIFGNAEDFRVDMRRLNAIRRPAMHSRSIDPVQFTEMVIVIDRISSMIRGSFGWMAEW
DEEG
>Mature_483_residues
SEPEDASDPQTNQNEPQSERDVDESLPARDILKIGSMVKALGAQQSKFDAVTRLAQVGAHAQLSTSAQMLALSDKVSALT
NIGATSRLARMLEETNRHSRHLQDMTSTARLLAQSGKLAQYSKLAALASGYPGSTLPNWAILNDHSNIDQLMRSQRWADH
FSADSFGYATGRAGRFATGGLVSEQLRLVAERAAGIRVAAGIGALQVSPGVKAMLARNVRIGETLSKLSAFAGAIDTIGA
FSPASSAAVDSLLGEWQTRPDLPEEFWHRRSVRQRYYEEAEVDRGLIDTRNTEIVEVLVESGLVEGYVRGKRVTAVLEAG
PLSVEVSASRTRIGTYRAITGFEIAMRGLVRRVLVQAQIDAGENPDAWFKQRVPGDILQRAKERKADAERVGEQAADLIA
FVDLGDLIPIVTLKKNWPVFQPIFGNAEDFRVDMRRLNAIRRPAMHSRSIDPVQFTEMVIVIDRISSMIRGSFGWMAEWD
EEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53112; Mature: 52981

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPEDASDPQTNQNEPQSERDVDESLPARDILKIGSMVKALGAQQSKFDAVTRLAQVGA
CCCCCCCCCCCCCCCCCCHHHCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
HAQLSTSAQMLALSDKVSALTNIGATSRLARMLEETNRHSRHLQDMTSTARLLAQSGKLA
CCHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QYSKLAALASGYPGSTLPNWAILNDHSNIDQLMRSQRWADHFSADSFGYATGRAGRFATG
HHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GLVSEQLRLVAERAAGIRVAAGIGALQVSPGVKAMLARNVRIGETLSKLSAFAGAIDTIG
HHHHHHHHHHHHHHCCEEEEECCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
AFSPASSAAVDSLLGEWQTRPDLPEEFWHRRSVRQRYYEEAEVDRGLIDTRNTEIVEVLV
CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ESGLVEGYVRGKRVTAVLEAGPLSVEVSASRTRIGTYRAITGFEIAMRGLVRRVLVQAQI
HHHHHHHHHCCCEEEEEEECCCCEEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
DAGENPDAWFKQRVPGDILQRAKERKADAERVGEQAADLIAFVDLGDLIPIVTLKKNWPV
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
FQPIFGNAEDFRVDMRRLNAIRRPAMHSRSIDPVQFTEMVIVIDRISSMIRGSFGWMAEW
CCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
DEEG
CCCC
>Mature Secondary Structure 
SEPEDASDPQTNQNEPQSERDVDESLPARDILKIGSMVKALGAQQSKFDAVTRLAQVGA
CCCCCCCCCCCCCCCCCHHHCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
HAQLSTSAQMLALSDKVSALTNIGATSRLARMLEETNRHSRHLQDMTSTARLLAQSGKLA
CCHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QYSKLAALASGYPGSTLPNWAILNDHSNIDQLMRSQRWADHFSADSFGYATGRAGRFATG
HHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GLVSEQLRLVAERAAGIRVAAGIGALQVSPGVKAMLARNVRIGETLSKLSAFAGAIDTIG
HHHHHHHHHHHHHHCCEEEEECCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
AFSPASSAAVDSLLGEWQTRPDLPEEFWHRRSVRQRYYEEAEVDRGLIDTRNTEIVEVLV
CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ESGLVEGYVRGKRVTAVLEAGPLSVEVSASRTRIGTYRAITGFEIAMRGLVRRVLVQAQI
HHHHHHHHHCCCEEEEEEECCCCEEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
DAGENPDAWFKQRVPGDILQRAKERKADAERVGEQAADLIAFVDLGDLIPIVTLKKNWPV
CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
FQPIFGNAEDFRVDMRRLNAIRRPAMHSRSIDPVQFTEMVIVIDRISSMIRGSFGWMAEW
CCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
DEEG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA