Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198316
Identifier: 87198316
GI number: 87198316
Start: 313985
End: 314635
Strand: Direct
Name: 87198316
Synonym: Saro_0291
Alternate gene names: NA
Gene position: 313985-314635 (Clockwise)
Preceding gene: 87198315
Following gene: 87198317
Centisome position: 8.82
GC content: 63.9
Gene sequence:
>651_bases GTGGCGCGCGGCGGGGCAAAGCTGGGCAACCGGCTGGCACCCGCGCGCTTCGTGCTGTTTCTCGTGCTGCTGGTCGCCGC GTTCGCCGGCGACCGGCTGCTGCTGGAGCCAGGGAGCCTTGCCGATAGCCTGGCCATGAGCTTCGATATCGCCGCGCTGG TGTTCCTCGTCTCGCTCATCCCGCTGCTTCGAGGCGCAGGGACAGCCAGGATGCGCCGCCATGCCGCCGAAAACGATGCC AATCGCGTTCTGGTGCTGATGGTGACGACCATCGTCACGATGGTCGTGCTGGCGGCGATTTCGGGAGAGTTGCCGCCAGC ATCGGCGGGAGACCGGCTGGCGATGGTCAAGCTGATCGGCACGCTGCTGCTGGCCTGGCTCTTCACCAACATGGTCTATG CGCTGCATTACGCGCACCTCTACTATTCCAGCCACGATGGAACGGATCGGGGCGGGATCGAGTTTCCCGGCACGCGGACG CCCGACTATCTCGATTTCGCATATTTCAGCTTCACGCTGGGCATGACCTTCCAGACATCGGACACCCAGATCACCGCGCG CACGATCCGTCGCATCGCGACGATGCATTCGTTCGTCGCGTTCGTGTTCAACATCGGGGTCGTTGCCTTCACGATCAACG CGCTGGGCTAG
Upstream 100 bases:
>100_bases TATCCGTGGCTCGAGCGCGTGGCGCCGGGCAAGGCGCCGACCGGGCTCGACCTGCTGCTCGAACCCCGGCGCCCCGGCGC GGCGAAGAAGAAGTAAGGGC
Downstream 100 bases:
>100_bases CGGCCGACCGGCCTGCCAAGCGGGCCATCAGGCGGTCCATCAGGCGGACCGTCAGCCGATCGTGCCGTTAAATCGCCATA AGTCTTGTTGCGGCGCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MARGGAKLGNRLAPARFVLFLVLLVAAFAGDRLLLEPGSLADSLAMSFDIAALVFLVSLIPLLRGAGTARMRRHAAENDA NRVLVLMVTTIVTMVVLAAISGELPPASAGDRLAMVKLIGTLLLAWLFTNMVYALHYAHLYYSSHDGTDRGGIEFPGTRT PDYLDFAYFSFTLGMTFQTSDTQITARTIRRIATMHSFVAFVFNIGVVAFTINALG
Sequences:
>Translated_216_residues MARGGAKLGNRLAPARFVLFLVLLVAAFAGDRLLLEPGSLADSLAMSFDIAALVFLVSLIPLLRGAGTARMRRHAAENDA NRVLVLMVTTIVTMVVLAAISGELPPASAGDRLAMVKLIGTLLLAWLFTNMVYALHYAHLYYSSHDGTDRGGIEFPGTRT PDYLDFAYFSFTLGMTFQTSDTQITARTIRRIATMHSFVAFVFNIGVVAFTINALG >Mature_215_residues ARGGAKLGNRLAPARFVLFLVLLVAAFAGDRLLLEPGSLADSLAMSFDIAALVFLVSLIPLLRGAGTARMRRHAAENDAN RVLVLMVTTIVTMVVLAAISGELPPASAGDRLAMVKLIGTLLLAWLFTNMVYALHYAHLYYSSHDGTDRGGIEFPGTRTP DYLDFAYFSFTLGMTFQTSDTQITARTIRRIATMHSFVAFVFNIGVVAFTINALG
Specific function: Unknown
COG id: COG4291
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23362; Mature: 23231
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARGGAKLGNRLAPARFVLFLVLLVAAFAGDRLLLEPGSLADSLAMSFDIAALVFLVSLI CCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH PLLRGAGTARMRRHAAENDANRVLVLMVTTIVTMVVLAAISGELPPASAGDRLAMVKLIG HHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH TLLLAWLFTNMVYALHYAHLYYSSHDGTDRGGIEFPGTRTPDYLDFAYFSFTLGMTFQTS HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEECC DTQITARTIRRIATMHSFVAFVFNIGVVAFTINALG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC >Mature Secondary Structure ARGGAKLGNRLAPARFVLFLVLLVAAFAGDRLLLEPGSLADSLAMSFDIAALVFLVSLI CCCCHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH PLLRGAGTARMRRHAAENDANRVLVLMVTTIVTMVVLAAISGELPPASAGDRLAMVKLIG HHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH TLLLAWLFTNMVYALHYAHLYYSSHDGTDRGGIEFPGTRTPDYLDFAYFSFTLGMTFQTS HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEECC DTQITARTIRRIATMHSFVAFVFNIGVVAFTINALG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA