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The map label for this gene is xerC [H]

Identifier: 87198280

GI number: 87198280

Start: 268306

End: 269598

Strand: Direct

Name: xerC [H]

Synonym: Saro_0255

Alternate gene names: 87198280

Gene position: 268306-269598 (Clockwise)

Preceding gene: 87198276

Following gene: 87198284

Centisome position: 7.53

GC content: 57.77

Gene sequence:

>1293_bases
ATGCCAACCGCAAAGCTCACCGCCGCCATCGTCGAGAATGCTCGGCCGTCAATAAAGCCATACACGATTTGGGACACCGA
GCTTTCTGGCTTTGGGCTTCGCGTTTATCCGTCTGGCAAGTTGTCTTGGATCGCGAAATATCGGGTCGGCGGGGGCGGAA
GGAACGCGCCTGTCCGGTGTCCTTCCCTCGGTGACGCACGCAAGGTGTCGGCCAAAGACGCTCGTGCTGCAGCAAAAAGG
GAACTGGCCGCCGCGCAGTTGGGGGGCGATCCGATGGCCGTGATCAAGGCGCAACGTTGCGAGATGACGGTTGAAGCCCT
CATCTCGCTTTACGAGAAAGAAGGATGCTTCGTGCAGCGGGGCATCCGCATTGGGGTTCCTATGAAGCCCCTTACGAAAA
AATATACACTTTCCCGCCTTCGAAATCACGTCGTGCCGCTTCTCGGCAAGAAGCGAATCTCAGAAGTTTCGTCGCAAGAC
ATAGAAAGTCTGGGGCGTGCGATCACGATAGGCAAAACGTCGAAGGACGAAAAGGTGGGGGTGCGCAACCGCGTAATTGT
TAAGGGCGGAGAAGGTGCTGCACGTAAGGTAATACGTGACCTTTCCGCAGTCTTCTCATTCGCAATGCGACGAGGCTTGG
TAAAGGCCAACCCGGTAACCCTCGCCAGCGTCAGGAAAACCGACAACGTGCGTGTTCGCCACTTGTCGATGGACGAACTG
AAAAGGCTGGGCGAAGCACTGGACGAATTGGAAAAGGCAGGCGTGAATCCCAAGGCCGTGAATATTGCCCGGTTGTGGGC
ACTGACCGGATGCAGGCGCGATGAAATCGCAGGTCTGCAATGGTCTGAGGTGGATTTCGAAACGGGTCGTCTGGTCCTCC
AAGATACCAAAACGGGGCGTAGTGTCCGCCCCTTGGGTGGGGCAGCGGCGATCCTGCTCGCCAAGTTGCGGGAAGGGGCC
ACTGCTGATGCAGTATTTGTGTTTCCCGCTGAGCGTGGTGAAGGCTTCTTCCAAGGTACCAAGCGCGTTTGGGCGCAGGC
GATCCTTAAGGCCAAGCTACCTGGGGTCACACCGCACATTCTTCGACACACGGTTGGCAGTCTTGGCGCATCGGCAGGTG
AAGGCATGTTGTTGGTTGGCGCGGTTTTGGGCCATTCGAATGCCCGATCGACCTTGCAATACATGCACGTTGCCAGCGAT
CCAGCGCGCCTCGCTGCAGATCGCTTGACGACCCCTGTTGCGGACGCCCTCGGATTGCCGATGCCTGTTTCTCAGGAAGC
CGCAGCAGCTTGA

Upstream 100 bases:

>100_bases
GTGTTGATGTGCGCATTTGTGCGTCTGTGGCCAGCATCGGTGGTAGCTAGGTGGTAGCTTGATAATGGACGTATTGCGTC
AGTTTTGCTAGGTTTTGACA

Downstream 100 bases:

>100_bases
TTCTCCAAAACCGTTTGTCCGCGGAAGGTCGTGACAGCACCAAGTGATTCGCCGGGACTTGCCGGTGCATTTTTTGGTGA
GGTCTTCATATGCTCGTTTC

Product: phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MPTAKLTAAIVENARPSIKPYTIWDTELSGFGLRVYPSGKLSWIAKYRVGGGGRNAPVRCPSLGDARKVSAKDARAAAKR
ELAAAQLGGDPMAVIKAQRCEMTVEALISLYEKEGCFVQRGIRIGVPMKPLTKKYTLSRLRNHVVPLLGKKRISEVSSQD
IESLGRAITIGKTSKDEKVGVRNRVIVKGGEGAARKVIRDLSAVFSFAMRRGLVKANPVTLASVRKTDNVRVRHLSMDEL
KRLGEALDELEKAGVNPKAVNIARLWALTGCRRDEIAGLQWSEVDFETGRLVLQDTKTGRSVRPLGGAAAILLAKLREGA
TADAVFVFPAERGEGFFQGTKRVWAQAILKAKLPGVTPHILRHTVGSLGASAGEGMLLVGAVLGHSNARSTLQYMHVASD
PARLAADRLTTPVADALGLPMPVSQEAAAA

Sequences:

>Translated_430_residues
MPTAKLTAAIVENARPSIKPYTIWDTELSGFGLRVYPSGKLSWIAKYRVGGGGRNAPVRCPSLGDARKVSAKDARAAAKR
ELAAAQLGGDPMAVIKAQRCEMTVEALISLYEKEGCFVQRGIRIGVPMKPLTKKYTLSRLRNHVVPLLGKKRISEVSSQD
IESLGRAITIGKTSKDEKVGVRNRVIVKGGEGAARKVIRDLSAVFSFAMRRGLVKANPVTLASVRKTDNVRVRHLSMDEL
KRLGEALDELEKAGVNPKAVNIARLWALTGCRRDEIAGLQWSEVDFETGRLVLQDTKTGRSVRPLGGAAAILLAKLREGA
TADAVFVFPAERGEGFFQGTKRVWAQAILKAKLPGVTPHILRHTVGSLGASAGEGMLLVGAVLGHSNARSTLQYMHVASD
PARLAADRLTTPVADALGLPMPVSQEAAAA
>Mature_429_residues
PTAKLTAAIVENARPSIKPYTIWDTELSGFGLRVYPSGKLSWIAKYRVGGGGRNAPVRCPSLGDARKVSAKDARAAAKRE
LAAAQLGGDPMAVIKAQRCEMTVEALISLYEKEGCFVQRGIRIGVPMKPLTKKYTLSRLRNHVVPLLGKKRISEVSSQDI
ESLGRAITIGKTSKDEKVGVRNRVIVKGGEGAARKVIRDLSAVFSFAMRRGLVKANPVTLASVRKTDNVRVRHLSMDELK
RLGEALDELEKAGVNPKAVNIARLWALTGCRRDEIAGLQWSEVDFETGRLVLQDTKTGRSVRPLGGAAAILLAKLREGAT
ADAVFVFPAERGEGFFQGTKRVWAQAILKAKLPGVTPHILRHTVGSLGASAGEGMLLVGAVLGHSNARSTLQYMHVASDP
ARLAADRLTTPVADALGLPMPVSQEAAAA

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI2367104, Length=191, Percent_Identity=26.7015706806283, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 46115; Mature: 45984

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTAKLTAAIVENARPSIKPYTIWDTELSGFGLRVYPSGKLSWIAKYRVGGGGRNAPVRC
CCCHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCEEC
PSLGDARKVSAKDARAAAKRELAAAQLGGDPMAVIKAQRCEMTVEALISLYEKEGCFVQR
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEC
GIRIGVPMKPLTKKYTLSRLRNHVVPLLGKKRISEVSSQDIESLGRAITIGKTSKDEKVG
CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCC
VRNRVIVKGGEGAARKVIRDLSAVFSFAMRRGLVKANPVTLASVRKTDNVRVRHLSMDEL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCHHHH
KRLGEALDELEKAGVNPKAVNIARLWALTGCRRDEIAGLQWSEVDFETGRLVLQDTKTGR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEEECCCCC
SVRPLGGAAAILLAKLREGATADAVFVFPAERGEGFFQGTKRVWAQAILKAKLPGVTPHI
CCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
LRHTVGSLGASAGEGMLLVGAVLGHSNARSTLQYMHVASDPARLAADRLTTPVADALGLP
HHHHHHHHCCCCCCCEEEEEHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHCCC
MPVSQEAAAA
CCCCHHHCCC
>Mature Secondary Structure 
PTAKLTAAIVENARPSIKPYTIWDTELSGFGLRVYPSGKLSWIAKYRVGGGGRNAPVRC
CCHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCEEC
PSLGDARKVSAKDARAAAKRELAAAQLGGDPMAVIKAQRCEMTVEALISLYEKEGCFVQR
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEC
GIRIGVPMKPLTKKYTLSRLRNHVVPLLGKKRISEVSSQDIESLGRAITIGKTSKDEKVG
CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCC
VRNRVIVKGGEGAARKVIRDLSAVFSFAMRRGLVKANPVTLASVRKTDNVRVRHLSMDEL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCHHHH
KRLGEALDELEKAGVNPKAVNIARLWALTGCRRDEIAGLQWSEVDFETGRLVLQDTKTGR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEEECCCCC
SVRPLGGAAAILLAKLREGATADAVFVFPAERGEGFFQGTKRVWAQAILKAKLPGVTPHI
CCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
LRHTVGSLGASAGEGMLLVGAVLGHSNARSTLQYMHVASDPARLAADRLTTPVADALGLP
HHHHHHHHCCCCCCCEEEEEHHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHCCC
MPVSQEAAAA
CCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA