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The map label for this gene is 86751778

Identifier: 86751778

GI number: 86751778

Start: 5294064

End: 5294747

Strand: Reverse

Name: 86751778

Synonym: RPB_4680

Alternate gene names: NA

Gene position: 5294747-5294064 (Counterclockwise)

Preceding gene: 86751783

Following gene: 86751777

Centisome position: 99.31

GC content: 69.01

Gene sequence:

>684_bases
ATGGCTGACTATGTGGTCGAGTTCGGCAAGGACGGTCGGCCGGTCGAGCCCGACGGCCGGCTCGACGCCGCCGCCTTTCA
TCGCAACCAGCAGGCGATCTGCGAGGTGCTGGGCCGGCTGCTGCACGGAACAACGGGCGACGTGCTCGAGGCCGGCAGCG
GCACCGGCCAGCACGTCATCGCATTCGCCCGCGCGCATCCCGGGATCGTCTGGTGGCCGAGCGATTGTCATCCGCAGCAT
CTGATCAGCATTGCCGCCTGGCGCGCTTACGCGGGGCTCGACAATGTGCGGCCGCCGCTGCGGATCGATCTGTCCGATCC
GGCCTGGTGCGCGGAGATGACCGACGGGCGCGGTCCGGGGCCGCTGGCGGCGGTGTTTTGCGCGAATGTCGTGCACATCG
CGCCGTGGCCGGTCGCGGAGGGGCTGTTCGCCGGCGCCGCGCGCACGCTGCGGCCGGACGGGCGCTTGATCCTGTATGGG
CCGTTCAAGCGCGACGGCCACCATACCGCGATCAGCAATGCGGTGTTCGACACCAGCCTGCGCGCTGCCAATGCCGAATG
GGGCGTGCGCGACGTCGACGAATTGCAGCAGCTCGCGGCAGGGGGCGGCCTGTCTCTGGCCGAAATCGTCGAGATGCCGG
CCAACAATCTCATCCTGTGCTTCTCCCGAAGCGGCGAAACCTGA

Upstream 100 bases:

>100_bases
GGCGTTGCGGGCCGGCTTGGTTTGTCGCCGCCGCTTTGTTTCGCTATGTGGCTTGGAAGTGACAACGCGGCTTGCGTCAG
ATCAACGAGGAGCGGGGCGG

Downstream 100 bases:

>100_bases
ATGCTTCGCATAGGTTAGGTCCGGCCGCGGCAGTTGATCGCGGGCCGCTGCGGCCTATGATGCGGCGCGATCCTGCGGCC
CGGCCGCACACGAACCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MADYVVEFGKDGRPVEPDGRLDAAAFHRNQQAICEVLGRLLHGTTGDVLEAGSGTGQHVIAFARAHPGIVWWPSDCHPQH
LISIAAWRAYAGLDNVRPPLRIDLSDPAWCAEMTDGRGPGPLAAVFCANVVHIAPWPVAEGLFAGAARTLRPDGRLILYG
PFKRDGHHTAISNAVFDTSLRAANAEWGVRDVDELQQLAAGGGLSLAEIVEMPANNLILCFSRSGET

Sequences:

>Translated_227_residues
MADYVVEFGKDGRPVEPDGRLDAAAFHRNQQAICEVLGRLLHGTTGDVLEAGSGTGQHVIAFARAHPGIVWWPSDCHPQH
LISIAAWRAYAGLDNVRPPLRIDLSDPAWCAEMTDGRGPGPLAAVFCANVVHIAPWPVAEGLFAGAARTLRPDGRLILYG
PFKRDGHHTAISNAVFDTSLRAANAEWGVRDVDELQQLAAGGGLSLAEIVEMPANNLILCFSRSGET
>Mature_226_residues
ADYVVEFGKDGRPVEPDGRLDAAAFHRNQQAICEVLGRLLHGTTGDVLEAGSGTGQHVIAFARAHPGIVWWPSDCHPQHL
ISIAAWRAYAGLDNVRPPLRIDLSDPAWCAEMTDGRGPGPLAAVFCANVVHIAPWPVAEGLFAGAARTLRPDGRLILYGP
FKRDGHHTAISNAVFDTSLRAANAEWGVRDVDELQQLAAGGGLSLAEIVEMPANNLILCFSRSGET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI93102387, Length=206, Percent_Identity=41.747572815534, Blast_Score=139, Evalue=2e-33,
Organism=Homo sapiens, GI93102391, Length=142, Percent_Identity=41.5492957746479, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI93102401, Length=136, Percent_Identity=38.9705882352941, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71998087, Length=205, Percent_Identity=38.5365853658537, Blast_Score=133, Evalue=7e-32,
Organism=Drosophila melanogaster, GI28574095, Length=198, Percent_Identity=38.8888888888889, Blast_Score=133, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24316; Mature: 24185

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADYVVEFGKDGRPVEPDGRLDAAAFHRNQQAICEVLGRLLHGTTGDVLEAGSGTGQHVI
CCCCEEEECCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCEECCCCCCCEEE
AFARAHPGIVWWPSDCHPQHLISIAAWRAYAGLDNVRPPLRIDLSDPAWCAEMTDGRGPG
EEEECCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHCCCCCCCC
PLAAVFCANVVHIAPWPVAEGLFAGAARTLRPDGRLILYGPFKRDGHHTAISNAVFDTSL
HHHHHHHHHHHEECCCCHHHHHHHCCHHEECCCCCEEEEECCCCCCCHHHHHHHHHHHHH
RAANAEWGVRDVDELQQLAAGGGLSLAEIVEMPANNLILCFSRSGET
HCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEECCCCC
>Mature Secondary Structure 
ADYVVEFGKDGRPVEPDGRLDAAAFHRNQQAICEVLGRLLHGTTGDVLEAGSGTGQHVI
CCCEEEECCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCEECCCCCCCEEE
AFARAHPGIVWWPSDCHPQHLISIAAWRAYAGLDNVRPPLRIDLSDPAWCAEMTDGRGPG
EEEECCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHCCCCCCCC
PLAAVFCANVVHIAPWPVAEGLFAGAARTLRPDGRLILYGPFKRDGHHTAISNAVFDTSL
HHHHHHHHHHHEECCCCHHHHHHHCCHHEECCCCCEEEEECCCCCCCHHHHHHHHHHHHH
RAANAEWGVRDVDELQQLAAGGGLSLAEIVEMPANNLILCFSRSGET
HCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA