Click here to switch to the map view.

The map label for this gene is ydeG [H]

Identifier: 86751777

GI number: 86751777

Start: 5292705

End: 5293946

Strand: Reverse

Name: ydeG [H]

Synonym: RPB_4679

Alternate gene names: 86751777

Gene position: 5293946-5292705 (Counterclockwise)

Preceding gene: 86751778

Following gene: 86751776

Centisome position: 99.29

GC content: 68.2

Gene sequence:

>1242_bases
ATGGTTGACGCGACCGCGATCGATGGATTCGCTGACGATGCGCGCGCACGCTCGAACGTGATGCGGCTGGCGGCGGCGCA
GGCGCTGACCGGCGCCAATGCGGCGGTGATCTTCGCCACCGGCTCGATCATCGGCGCGCAGCTCGCGCCCAGCGTGGCGC
TCGCGACCGTGCCGATCTCGATGTATGTGGTCGGCCTCGCCGCCGGCACGCTGCCGACCGGCGCGATCGCGCGGCGCTAT
GGCCGCCGCGTCTCCTTCATGATCGGCGCCGGCTGCGGCGCGTTCACCGGCCTGCTCGGCGCGCTGGCGATCCTGTACGG
CTCGTTCGAGCTGTTCTGCGTGGCCACCTTTCTCGGCGGGCTGTACGGCGCGGTGTCGCAATCCTATCGCTTCGCCGCCG
CCGACGGCGCCAGCGTCGCGTATCGCCCCAAGGCGGTATCCTGGGTGATGGCCGGCGGCGTGTTCGCCGGCGTGCTCGGT
CCGCAGCTGGTGCAGTGGACCATGGACATTTGGCAGCCTTATCTGTTCGCCTTCAGCTATCTGGTGCAAGCCGCGGTCGC
GCTGGTCGCGATGGCGGTGCTGTGGAGCGTCGACGCGCCGAAGCCGCAGCCCGCCGATTTCGCCGGCGGCCGGCCGCTGC
TCGAAATCGTGCGGCAGCCGCGCTTCATCGCCGCGGCGATGTGCGGCGCGATCGCCTATCCGATGATGAATCTGGTGATG
ACGTCGGCGCCGCTCGCGATGCAGATGTGCGGGCTGCCGATCAGCGATTCCAATTTCGGCCTGCAATGGCACATCGTCGC
GATGTATGCGCCGAGCTTCTTCACCGGCTCGCTGATCGCGAAATTCGGCGCGCCGCGCGTGGTCGCGCTCGGGCTGGCGC
TGGAAGCTGCAGGCGCGTCGATCGGCCTGATGGGGATCACCGCCCCGCATTTCTGGGCGACGCTGTTCGTGATCGGGGTA
GGCTGGAATTTCGCCTTCGTCGGCGCTTCGGCGCTGGTGCTGGAGACCCACCAGCCGAGCGAAAAGAACAAGGTGCAGGC
GTTCAACGATTTCGTGGTGTTCGGCATGATGGCGCTGGGCTCGTTCGGGTCCGGGCAATTGCTGGCGAATTACGGCTGGG
CGACCGTCAACCTGACGGTGTTTCCGCCGGTTCTGCTCGGCCTCGTCGTGCTCGCGATCACCGGCTGGTCGCGAAAACGG
GTGGCGGCGGCCGCAGCCGCCGTGCCAGAACGCGGCATCTGA

Upstream 100 bases:

>100_bases
GGTCCGGCCGCGGCAGTTGATCGCGGGCCGCTGCGGCCTATGATGCGGCGCGATCCTGCGGCCCGGCCGCACACGAACCG
GGTGAAGGGCGAAACGACCA

Downstream 100 bases:

>100_bases
TCGCGACGAAGAACAACAAGACGATCCGGCCGTCCGAGCCGGACGCAGGGGAGACGCCGATGCCGTCGCGTGCGACGAAG
GCCGGTCGCCGCGGATGGTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MVDATAIDGFADDARARSNVMRLAAAQALTGANAAVIFATGSIIGAQLAPSVALATVPISMYVVGLAAGTLPTGAIARRY
GRRVSFMIGAGCGAFTGLLGALAILYGSFELFCVATFLGGLYGAVSQSYRFAAADGASVAYRPKAVSWVMAGGVFAGVLG
PQLVQWTMDIWQPYLFAFSYLVQAAVALVAMAVLWSVDAPKPQPADFAGGRPLLEIVRQPRFIAAAMCGAIAYPMMNLVM
TSAPLAMQMCGLPISDSNFGLQWHIVAMYAPSFFTGSLIAKFGAPRVVALGLALEAAGASIGLMGITAPHFWATLFVIGV
GWNFAFVGASALVLETHQPSEKNKVQAFNDFVVFGMMALGSFGSGQLLANYGWATVNLTVFPPVLLGLVVLAITGWSRKR
VAAAAAAVPERGI

Sequences:

>Translated_413_residues
MVDATAIDGFADDARARSNVMRLAAAQALTGANAAVIFATGSIIGAQLAPSVALATVPISMYVVGLAAGTLPTGAIARRY
GRRVSFMIGAGCGAFTGLLGALAILYGSFELFCVATFLGGLYGAVSQSYRFAAADGASVAYRPKAVSWVMAGGVFAGVLG
PQLVQWTMDIWQPYLFAFSYLVQAAVALVAMAVLWSVDAPKPQPADFAGGRPLLEIVRQPRFIAAAMCGAIAYPMMNLVM
TSAPLAMQMCGLPISDSNFGLQWHIVAMYAPSFFTGSLIAKFGAPRVVALGLALEAAGASIGLMGITAPHFWATLFVIGV
GWNFAFVGASALVLETHQPSEKNKVQAFNDFVVFGMMALGSFGSGQLLANYGWATVNLTVFPPVLLGLVVLAITGWSRKR
VAAAAAAVPERGI
>Mature_413_residues
MVDATAIDGFADDARARSNVMRLAAAQALTGANAAVIFATGSIIGAQLAPSVALATVPISMYVVGLAAGTLPTGAIARRY
GRRVSFMIGAGCGAFTGLLGALAILYGSFELFCVATFLGGLYGAVSQSYRFAAADGASVAYRPKAVSWVMAGGVFAGVLG
PQLVQWTMDIWQPYLFAFSYLVQAAVALVAMAVLWSVDAPKPQPADFAGGRPLLEIVRQPRFIAAAMCGAIAYPMMNLVM
TSAPLAMQMCGLPISDSNFGLQWHIVAMYAPSFFTGSLIAKFGAPRVVALGLALEAAGASIGLMGITAPHFWATLFVIGV
GWNFAFVGASALVLETHQPSEKNKVQAFNDFVVFGMMALGSFGSGQLLANYGWATVNLTVFPPVLLGLVVLAITGWSRKR
VAAAAAAVPERGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42926; Mature: 42926

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDATAIDGFADDARARSNVMRLAAAQALTGANAAVIFATGSIIGAQLAPSVALATVPIS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHCCCHHHHHHHHH
MYVVGLAAGTLPTGAIARRYGRRVSFMIGAGCGAFTGLLGALAILYGSFELFCVATFLGG
HHHHHHHHCCCCHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LYGAVSQSYRFAAADGASVAYRPKAVSWVMAGGVFAGVLGPQLVQWTMDIWQPYLFAFSY
HHHHHHHCCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVQAAVALVAMAVLWSVDAPKPQPADFAGGRPLLEIVRQPRFIAAAMCGAIAYPMMNLVM
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TSAPLAMQMCGLPISDSNFGLQWHIVAMYAPSFFTGSLIAKFGAPRVVALGLALEAAGAS
HCCCHHHHHCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCEEEEHHHHHHCCCC
IGLMGITAPHFWATLFVIGVGWNFAFVGASALVLETHQPSEKNKVQAFNDFVVFGMMALG
EEEEECCCHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC
SFGSGQLLANYGWATVNLTVFPPVLLGLVVLAITGWSRKRVAAAAAAVPERGI
CCCCCCEEEECCEEEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVDATAIDGFADDARARSNVMRLAAAQALTGANAAVIFATGSIIGAQLAPSVALATVPIS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHCCCHHHHHHHHH
MYVVGLAAGTLPTGAIARRYGRRVSFMIGAGCGAFTGLLGALAILYGSFELFCVATFLGG
HHHHHHHHCCCCHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LYGAVSQSYRFAAADGASVAYRPKAVSWVMAGGVFAGVLGPQLVQWTMDIWQPYLFAFSY
HHHHHHHCCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVQAAVALVAMAVLWSVDAPKPQPADFAGGRPLLEIVRQPRFIAAAMCGAIAYPMMNLVM
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
TSAPLAMQMCGLPISDSNFGLQWHIVAMYAPSFFTGSLIAKFGAPRVVALGLALEAAGAS
HCCCHHHHHCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCEEEEHHHHHHCCCC
IGLMGITAPHFWATLFVIGVGWNFAFVGASALVLETHQPSEKNKVQAFNDFVVFGMMALG
EEEEECCCHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC
SFGSGQLLANYGWATVNLTVFPPVLLGLVVLAITGWSRKRVAAAAAAVPERGI
CCCCCCEEEECCEEEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]