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The map label for this gene is 86751694

Identifier: 86751694

GI number: 86751694

Start: 5190612

End: 5191130

Strand: Reverse

Name: 86751694

Synonym: RPB_4596

Alternate gene names: NA

Gene position: 5191130-5190612 (Counterclockwise)

Preceding gene: 86751695

Following gene: 86751693

Centisome position: 97.36

GC content: 68.4

Gene sequence:

>519_bases
GTGCTTGCCGTCGCTGCGGCGGTGCTGGCGCCGCGCGTGGCGCAGGCGCAGGCCAATTTCGACCGGCCTGGCGCCGATTA
TCTGCGCGCGCCGGTGGCGAGCAACGATCCCGCCGACTGCGCGCTGATGTGCGAGCGCGACCGCCGCTGCCGGTCCTGGA
CCTTCGCCTATCCGCAGGCGCCCGAGGACGGTGCGGTCTGCTGGCTGAAGGGCAGCGTACCACAGCGTACGCCGAACAAT
TGCTGCGTGTCGGGCGTGCGCGGCGCCGGCGTTCTCGAGCCGCGCACCGGCGCGATCGAAGCGTCGATCGACCGCTTCGG
CGGCGACTACCGCAATTTCGAGTTGAAGCACAACGAAGGCGACGAAGCCTGCAAGGCCGCCTGCGAGCAGGACAACAAAT
GCCGCGCCTGGACCTATGCGCGGCCGGGCTATGTCGGCCGCAACGCCCGTTGCTTTCTGAAAAGCCAGGTCAAACCGCCG
CAGCGCAAGCCCGGGTTTTTTTCCGGCGTGGTCAGGTAA

Upstream 100 bases:

>100_bases
GTCCGGCTCCATATTCTGGTGCACCGATCGGCGGGACACGGGCCTATTTCGAAAGCGGGTGTGGATGCGGCGAGGCGGCC
CGCTCAGGGCGTGGATACTC

Downstream 100 bases:

>100_bases
CGTTCGCCGGAACCCTCTCGTAACTCAGGCACGCGCCACCGGGAGAACCGGTGCAGCGCATCGCCAGCAGAGGGATTTCG
ACATGTTTCAGGCCCAACTG

Product: apple PAN precursor

Products: NA

Alternate protein names: PAN/Apple Domain Protein; N/Apple PAN Protein

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MLAVAAAVLAPRVAQAQANFDRPGADYLRAPVASNDPADCALMCERDRRCRSWTFAYPQAPEDGAVCWLKGSVPQRTPNN
CCVSGVRGAGVLEPRTGAIEASIDRFGGDYRNFELKHNEGDEACKAACEQDNKCRAWTYARPGYVGRNARCFLKSQVKPP
QRKPGFFSGVVR

Sequences:

>Translated_172_residues
MLAVAAAVLAPRVAQAQANFDRPGADYLRAPVASNDPADCALMCERDRRCRSWTFAYPQAPEDGAVCWLKGSVPQRTPNN
CCVSGVRGAGVLEPRTGAIEASIDRFGGDYRNFELKHNEGDEACKAACEQDNKCRAWTYARPGYVGRNARCFLKSQVKPP
QRKPGFFSGVVR
>Mature_172_residues
MLAVAAAVLAPRVAQAQANFDRPGADYLRAPVASNDPADCALMCERDRRCRSWTFAYPQAPEDGAVCWLKGSVPQRTPNN
CCVSGVRGAGVLEPRTGAIEASIDRFGGDYRNFELKHNEGDEACKAACEQDNKCRAWTYARPGYVGRNARCFLKSQVKPP
QRKPGFFSGVVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18828; Mature: 18828

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVAAAVLAPRVAQAQANFDRPGADYLRAPVASNDPADCALMCERDRRCRSWTFAYPQA
CHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEECCCC
PEDGAVCWLKGSVPQRTPNNCCVSGVRGAGVLEPRTGAIEASIDRFGGDYRNFELKHNEG
CCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCEEHHHHHCCCCCCCEEEECCCC
DEACKAACEQDNKCRAWTYARPGYVGRNARCFLKSQVKPPQRKPGFFSGVVR
HHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAVAAAVLAPRVAQAQANFDRPGADYLRAPVASNDPADCALMCERDRRCRSWTFAYPQA
CHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEECCCC
PEDGAVCWLKGSVPQRTPNNCCVSGVRGAGVLEPRTGAIEASIDRFGGDYRNFELKHNEG
CCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCEEHHHHHCCCCCCCEEEECCCC
DEACKAACEQDNKCRAWTYARPGYVGRNARCFLKSQVKPPQRKPGFFSGVVR
HHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA