| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ohr [H]
Identifier: 86751688
GI number: 86751688
Start: 5184717
End: 5185142
Strand: Reverse
Name: ohr [H]
Synonym: RPB_4590
Alternate gene names: 86751688
Gene position: 5185142-5184717 (Counterclockwise)
Preceding gene: 86751689
Following gene: 86751686
Centisome position: 97.25
GC content: 69.01
Gene sequence:
>426_bases ATGTCGGTCGACAAAGTTCTCTACCGTGCCACTGCCACCGCCACCGGAGGCCGCGACGGGCGCGGCGTCAGCAGCGACGG CCAGCTCGATCTGGCGCTGACCACGCCGAAGGAGCTCGGCGGCCCCGGCGGCGCCGGCACCAATCCGGAGCAATTATTCG CGGTCGGCTATTCGGCCTGCTTCCTCGGCGCGATGAAGTTCGTCGCCGGGCGCGACAAGCTGCCGATCCCCAAGGATGTC AGCGTCACCGGCACGGTCGGCATCGGCCCGAGCGCGACCGGCTTCGGCATCGAGGCCGAGCTGAAGATCAGCCTGCCCGG CATGGATCGCGCCCAGGCGCAGACCCTGGTCGACGCCGCGCATGCCGTCTGCCCGTATTCCAACGCCACCCGCGGCAATA TCGACGTCACGCTGACGCTGGTGTGA
Upstream 100 bases:
>100_bases CGGCCCGGTCAGCGTCCATTCGACCGTCAATCATATCGCGCGCGATCTTCATGCGGGCGATTGAATCCACCAACTATCAT CCCAGCAAAAGGAAACTGAC
Downstream 100 bases:
>100_bases TCGGCTGCGCGGCCGCATTCCGGCGGCGGACGGACTCAGGTCCCGCTTCCCCAAAAGTTCGTCGTGCCCGGGCTTGACCC GGGCATCCACGATTTGAGGC
Product: OsmC-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSVDKVLYRATATATGGRDGRGVSSDGQLDLALTTPKELGGPGGAGTNPEQLFAVGYSACFLGAMKFVAGRDKLPIPKDV SVTGTVGIGPSATGFGIEAELKISLPGMDRAQAQTLVDAAHAVCPYSNATRGNIDVTLTLV
Sequences:
>Translated_141_residues MSVDKVLYRATATATGGRDGRGVSSDGQLDLALTTPKELGGPGGAGTNPEQLFAVGYSACFLGAMKFVAGRDKLPIPKDV SVTGTVGIGPSATGFGIEAELKISLPGMDRAQAQTLVDAAHAVCPYSNATRGNIDVTLTLV >Mature_140_residues SVDKVLYRATATATGGRDGRGVSSDGQLDLALTTPKELGGPGGAGTNPEQLFAVGYSACFLGAMKFVAGRDKLPIPKDVS VTGTVGIGPSATGFGIEAELKISLPGMDRAQAQTLVDAAHAVCPYSNATRGNIDVTLTLV
Specific function: Organic hydroperoxide detoxification protein. Confers increased resistance to tert-butyl hydroperoxide killing [H]
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
None
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR019953 - InterPro: IPR003718 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: NA
Molecular weight: Translated: 14310; Mature: 14179
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDKVLYRATATATGGRDGRGVSSDGQLDLALTTPKELGGPGGAGTNPEQLFAVGYSAC CCHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCHHHEEEHHHHHH FLGAMKFVAGRDKLPIPKDVSVTGTVGIGPSATGFGIEAELKISLPGMDRAQAQTLVDAA HHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH HAVCPYSNATRGNIDVTLTLV HHHCCCCCCCCCCEEEEEEEC >Mature Secondary Structure SVDKVLYRATATATGGRDGRGVSSDGQLDLALTTPKELGGPGGAGTNPEQLFAVGYSAC CHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCHHHEEEHHHHHH FLGAMKFVAGRDKLPIPKDVSVTGTVGIGPSATGFGIEAELKISLPGMDRAQAQTLVDAA HHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHH HAVCPYSNATRGNIDVTLTLV HHHCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]