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The map label for this gene is 86751653

Identifier: 86751653

GI number: 86751653

Start: 5149067

End: 5150086

Strand: Reverse

Name: 86751653

Synonym: RPB_4555

Alternate gene names: NA

Gene position: 5150086-5149067 (Counterclockwise)

Preceding gene: 86751654

Following gene: 86751652

Centisome position: 96.59

GC content: 69.22

Gene sequence:

>1020_bases
ATGAGCGACTTCGAAACGTCCGGCGAGGCGGCCTCGATCGTCTCGGTCACCGACCGCGTCCGCGAGGTCGCGATCGGCGC
GCCGGTGGGGGCGGTGCATTTCCTCGGCGACACCGCGGTGTTCATCGGCGCGGAGGAAAACGCGACCTTTGCCAAGTCGG
ATGGCGAGAGCTCGACCGTCGCGCTGCACGGCGGCGCCGTTCTCAGCTCGGTCACCGACGGCAAGCGCATCGTCAGCGGC
GGCGACGACGGCAAGGTGATGGCGCTCGACGCGGGCGGCAAGGCCGAGCTGTTCGCCACCGACGCCAAGCGGCGCTGGAT
CGACAATGTCGCGCTGCATCCGGACGGTGCGGTGGCGTGGTCGGCGGGCAAGATCGCTTACGTCCGCGCGCCGAAGGCCG
AGGAGAAATTCTTCGAGGTGCCGTCGACGGTCGGCGGCCTCGCTTTCGCGCCGAAGGGAATGCGGCTCGCGATCGCGCAT
TACAACGGCGTGACGCTGTGGTTTCCGAACATGGCGGCCAATGCCGAAATGCTCGAATGGGCCGGCTCGCATCTCGGCGT
GATGTTCAGCCCGGACAACCGTTTTCTGGTCACGTCGATGCACGAGCCGGCGCTGCACGGCTGGCGGCTCGCCGACGCCA
AGCACATGCGGATGACCGGCTATCCCGGCCGGGTGCGGTCGATGGCCTGGACCTCGGGCGGCAAGGGCCTCGCTACCTCG
GGCGCCGACGCCGTGATCGTCTGGCCGTTCGCCAGCAAGGACGGGCCGATGGGCAAGCAGCCGGCGATGCTGGCGCCGCT
GCAGGCGCGCGTCAGCATGGTGGCGTGCCACCCCAAGCAGGACATCCTCGCCACCGGCTACAGCGATGGCACCGTGCTGA
TGGTGCGGCTCACCGACGGCGCCGAGATCCTGGTCCGGCGCAACGGCACGCCGCCGGTCACGGCACTGGCGTGGAATGCG
AGCGGCAGTCTGCTGGCATTCGCCGACGAGGAGGGTGCAGCGGGACTGCTGACGCTGTAA

Upstream 100 bases:

>100_bases
CCTGGAAGGACGACGAGCCGCGCGAAAGCCGCGTCGTGTTCATCGGTCGCGAATTGCCCGAACAGGCGATCCGCGACGGC
TTCGCGAAGTGCGTGGCGCA

Downstream 100 bases:

>100_bases
GAGGAAGCCGGTTCCCGACCGGGCGGTTTTCTCATGCGCTTCCTCGCCACCTTCCAGACCCTCGACTTCCTCGACACGCT
GATCAGCCTGGGCGCAGCCT

Product: WD-40 repeat-containing protein

Products: NA

Alternate protein names: WD-40 Repeat Protein; WD Repeat-Containing Protein; WD-40 Repeat-Containing G-Protein; WD-Repeat Family Protein; G- Repeat Protein; WD40 Domain-Containing Protein; Beta WD-40 Repeat-Containing G-Protein; WD40 Repeat Subgroup; Peptidase; Pentapeptide Repeat-Containing Protein; Vegetatible Incompatibility; Wd-40 Repeat Protein

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSDFETSGEAASIVSVTDRVREVAIGAPVGAVHFLGDTAVFIGAEENATFAKSDGESSTVALHGGAVLSSVTDGKRIVSG
GDDGKVMALDAGGKAELFATDAKRRWIDNVALHPDGAVAWSAGKIAYVRAPKAEEKFFEVPSTVGGLAFAPKGMRLAIAH
YNGVTLWFPNMAANAEMLEWAGSHLGVMFSPDNRFLVTSMHEPALHGWRLADAKHMRMTGYPGRVRSMAWTSGGKGLATS
GADAVIVWPFASKDGPMGKQPAMLAPLQARVSMVACHPKQDILATGYSDGTVLMVRLTDGAEILVRRNGTPPVTALAWNA
SGSLLAFADEEGAAGLLTL

Sequences:

>Translated_339_residues
MSDFETSGEAASIVSVTDRVREVAIGAPVGAVHFLGDTAVFIGAEENATFAKSDGESSTVALHGGAVLSSVTDGKRIVSG
GDDGKVMALDAGGKAELFATDAKRRWIDNVALHPDGAVAWSAGKIAYVRAPKAEEKFFEVPSTVGGLAFAPKGMRLAIAH
YNGVTLWFPNMAANAEMLEWAGSHLGVMFSPDNRFLVTSMHEPALHGWRLADAKHMRMTGYPGRVRSMAWTSGGKGLATS
GADAVIVWPFASKDGPMGKQPAMLAPLQARVSMVACHPKQDILATGYSDGTVLMVRLTDGAEILVRRNGTPPVTALAWNA
SGSLLAFADEEGAAGLLTL
>Mature_338_residues
SDFETSGEAASIVSVTDRVREVAIGAPVGAVHFLGDTAVFIGAEENATFAKSDGESSTVALHGGAVLSSVTDGKRIVSGG
DDGKVMALDAGGKAELFATDAKRRWIDNVALHPDGAVAWSAGKIAYVRAPKAEEKFFEVPSTVGGLAFAPKGMRLAIAHY
NGVTLWFPNMAANAEMLEWAGSHLGVMFSPDNRFLVTSMHEPALHGWRLADAKHMRMTGYPGRVRSMAWTSGGKGLATSG
ADAVIVWPFASKDGPMGKQPAMLAPLQARVSMVACHPKQDILATGYSDGTVLMVRLTDGAEILVRRNGTPPVTALAWNAS
GSLLAFADEEGAAGLLTL

Specific function: Unknown

COG id: COG2319

COG function: function code R; FOG: WD40 repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35495; Mature: 35364

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFETSGEAASIVSVTDRVREVAIGAPVGAVHFLGDTAVFIGAEENATFAKSDGESSTV
CCCCCCCCCCEEEHHHHHHHHHEEECCCCCEEEEECCEEEEEECCCCCEEEECCCCCCEE
ALHGGAVLSSVTDGKRIVSGGDDGKVMALDAGGKAELFATDAKRRWIDNVALHPDGAVAW
EEECCEEEECCCCCCEEEECCCCCEEEEEECCCCEEEEEECCHHHHHCCEEECCCCCEEE
SAGKIAYVRAPKAEEKFFEVPSTVGGLAFAPKGMRLAIAHYNGVTLWFPNMAANAEMLEW
CCCCEEEEECCCCHHHHHHCCCCCCCEEECCCCCEEEEEEECCEEEECCCCCCCCHHHHH
AGSHLGVMFSPDNRFLVTSMHEPALHGWRLADAKHMRMTGYPGRVRSMAWTSGGKGLATS
CCCCEEEEECCCCCEEEEECCCCCCCCEEECCCCEEEEECCCCHHEEEEECCCCCEEECC
GADAVIVWPFASKDGPMGKQPAMLAPLQARVSMVACHPKQDILATGYSDGTVLMVRLTDG
CCCEEEEEEECCCCCCCCCCCCEECCHHHEEEEEEECCCCCEEEECCCCCEEEEEEECCC
AEILVRRNGTPPVTALAWNASGSLLAFADEEGAAGLLTL
EEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCEEEEC
>Mature Secondary Structure 
SDFETSGEAASIVSVTDRVREVAIGAPVGAVHFLGDTAVFIGAEENATFAKSDGESSTV
CCCCCCCCCEEEHHHHHHHHHEEECCCCCEEEEECCEEEEEECCCCCEEEECCCCCCEE
ALHGGAVLSSVTDGKRIVSGGDDGKVMALDAGGKAELFATDAKRRWIDNVALHPDGAVAW
EEECCEEEECCCCCCEEEECCCCCEEEEEECCCCEEEEEECCHHHHHCCEEECCCCCEEE
SAGKIAYVRAPKAEEKFFEVPSTVGGLAFAPKGMRLAIAHYNGVTLWFPNMAANAEMLEW
CCCCEEEEECCCCHHHHHHCCCCCCCEEECCCCCEEEEEEECCEEEECCCCCCCCHHHHH
AGSHLGVMFSPDNRFLVTSMHEPALHGWRLADAKHMRMTGYPGRVRSMAWTSGGKGLATS
CCCCEEEEECCCCCEEEEECCCCCCCCEEECCCCEEEEECCCCHHEEEEECCCCCEEECC
GADAVIVWPFASKDGPMGKQPAMLAPLQARVSMVACHPKQDILATGYSDGTVLMVRLTDG
CCCEEEEEEECCCCCCCCCCCCEECCHHHEEEEEEECCCCCEEEECCCCCEEEEEEECCC
AEILVRRNGTPPVTALAWNASGSLLAFADEEGAAGLLTL
EEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA