Click here to switch to the map view.

The map label for this gene is yeaS [C]

Identifier: 86751618

GI number: 86751618

Start: 5107435

End: 5108070

Strand: Reverse

Name: yeaS [C]

Synonym: RPB_4520

Alternate gene names: 86751618

Gene position: 5108070-5107435 (Counterclockwise)

Preceding gene: 86751621

Following gene: 86751616

Centisome position: 95.81

GC content: 69.81

Gene sequence:

>636_bases
ATGCTCGGCATTCACGATTTCTGGCTGTTCGTCGCCTCCGGGCTGCTGCTCAATGTCACGCCCGGGCCGGACACCGCCTT
CATCCTCGGTCGCGGGCTTCAATTCGGTTGGCGCGGCGGTGCTGCGGCGGCGCTCGGCGTCAGCGCCGGCTGCCTGGTGC
ACGTCACGGCGGCGGCGGTCGGACTGTCGGCGCTGCTGATGGCCTCGACGCTGGCCTTCACCGCCGTCAAGCTGATCGGC
GCAGCCTATCTGGTCTGGCTCGGAATCGGCATGCTGCTGTCGCGCGCGACCAGCTTTGCGGCGGCGTCGGACGATGCGCC
GACGCTGCGGCACGCGCAGGTGTTCCGCCAGGGCATGCTGACCAACGCGCTCAACCCGAAAGTGGCGCTGTTCTTCCTGG
CCTTCCTGCCGCAATTCGTCGATGCCGAGGCGCCTCACAAGGCGCTGGCGTTCCTGGTGCTCGGGCTGATCTTCGTCGCC
AACGGCACGCTGTATTGCCTGGCGCTGGCGGCGTTCGCGGCGCGGGCGTCGGATCGGCTGCGCCGCTCCGGCCGGGTGCT
GCAATGGATCAATCGCGGGCTCGGCGCGCTGTTCGTGGCGCTCGGCCTGCGCGTCGCGCTGATGCAGGCGCGCTGA

Upstream 100 bases:

>100_bases
GCGGTGGCGGACCGGGTTCTCGCGGCCCGCCATCCGCCTTGACCGCCGGGCCGTTCCCGGATGGAGATGCCGGAAGATCA
AGTCTCACTGGCGCCACGCA

Downstream 100 bases:

>100_bases
CCGCGCATCAGCCGAACATCTTCACCAGCGTCTCGGCGGACAGATAGCAGCCGAGCCCGATGATCGAGATCAGAAACCAG
CGCCGGAACACGTCGGGGTG

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLGIHDFWLFVASGLLLNVTPGPDTAFILGRGLQFGWRGGAAAALGVSAGCLVHVTAAAVGLSALLMASTLAFTAVKLIG
AAYLVWLGIGMLLSRATSFAAASDDAPTLRHAQVFRQGMLTNALNPKVALFFLAFLPQFVDAEAPHKALAFLVLGLIFVA
NGTLYCLALAAFAARASDRLRRSGRVLQWINRGLGALFVALGLRVALMQAR

Sequences:

>Translated_211_residues
MLGIHDFWLFVASGLLLNVTPGPDTAFILGRGLQFGWRGGAAAALGVSAGCLVHVTAAAVGLSALLMASTLAFTAVKLIG
AAYLVWLGIGMLLSRATSFAAASDDAPTLRHAQVFRQGMLTNALNPKVALFFLAFLPQFVDAEAPHKALAFLVLGLIFVA
NGTLYCLALAAFAARASDRLRRSGRVLQWINRGLGALFVALGLRVALMQAR
>Mature_211_residues
MLGIHDFWLFVASGLLLNVTPGPDTAFILGRGLQFGWRGGAAAALGVSAGCLVHVTAAAVGLSALLMASTLAFTAVKLIG
AAYLVWLGIGMLLSRATSFAAASDDAPTLRHAQVFRQGMLTNALNPKVALFFLAFLPQFVDAEAPHKALAFLVLGLIFVA
NGTLYCLALAAFAARASDRLRRSGRVLQWINRGLGALFVALGLRVALMQAR

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=210, Percent_Identity=27.6190476190476, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI48994979, Length=198, Percent_Identity=27.7777777777778, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22165; Mature: 22165

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGIHDFWLFVASGLLLNVTPGPDTAFILGRGLQFGWRGGAAAALGVSAGCLVHVTAAAV
CCCHHHHHHHHHCCCEEEECCCCCHHHEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHH
GLSALLMASTLAFTAVKLIGAAYLVWLGIGMLLSRATSFAAASDDAPTLRHAQVFRQGML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
TNALNPKVALFFLAFLPQFVDAEAPHKALAFLVLGLIFVANGTLYCLALAAFAARASDRL
HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RRSGRVLQWINRGLGALFVALGLRVALMQAR
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLGIHDFWLFVASGLLLNVTPGPDTAFILGRGLQFGWRGGAAAALGVSAGCLVHVTAAAV
CCCHHHHHHHHHCCCEEEECCCCCHHHEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHH
GLSALLMASTLAFTAVKLIGAAYLVWLGIGMLLSRATSFAAASDDAPTLRHAQVFRQGML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
TNALNPKVALFFLAFLPQFVDAEAPHKALAFLVLGLIFVANGTLYCLALAAFAARASDRL
HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RRSGRVLQWINRGLGALFVALGLRVALMQAR
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8169201; 10984043 [H]