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The map label for this gene is yqgE [C]

Identifier: 86751600

GI number: 86751600

Start: 5090017

End: 5090673

Strand: Reverse

Name: yqgE [C]

Synonym: RPB_4502

Alternate gene names: 86751600

Gene position: 5090673-5090017 (Counterclockwise)

Preceding gene: 86751602

Following gene: 86751596

Centisome position: 95.48

GC content: 63.93

Gene sequence:

>657_bases
ATGGTGACTAAGTCCAAAAGACCCAAGTCAGGCGATAGATCGGGCCGAGAGCCCGGCAACGCGGGGCCGATCGAGCAGGG
CGACTATCTCGACGGTCAGTTGCTGATCGCGATGCCGGTGATGGAAGACGAGCGCTTCGCGCGGTCGGTGATCTACATCT
GCGCGCATTCCTCGGAAGGCGCGATGGGCATCATCGTCAATCGCCCCGCCGGCAGCATCGATTTTCCCGAATTGCTGGTG
CAACTCGACATCGTCGAGAAGCCCGAGCAGATCAAGCTGCCGGATCACGCCGAGTCCATGAAGGTGTTGCGGGGCGGGCC
GGTGGAAACCGGCCGCGGCTTCGTGCTGCATTCGAGCGACTTCTTCATCAAGGACGCGACCCTGCCGATCGATGACGGCA
TTTCTCTGACCGCGACCGTCGACATCCTCCGGGCGATCGCCAGCGGCGCCGGCCCGAAGCACGCCATCCTGGCGCTCGGC
TATGCCGGCTGGGCGCCGGGCCAGCTCGAGACCGAGATCCAGGACAATGGCTGGCTGCATTGCGACGCCGACGCGGATTT
GGTGTTCGGCAACGACATCGAAGAGAAATACGACCGCGCGCTGCACAAGCTCGGCATCGAGCCGGGCATGCTGTCGGCCG
AAGCCGGCCACGCTTAA

Upstream 100 bases:

>100_bases
CACTGAATTGGCCGTGATTCGGCGGCCAGCCTGCGGCGACTGGTTGATTGACAGGATGCGCACCCAATATCAGGATAATG
ATGCAACGCGAGGATCCCTG

Downstream 100 bases:

>100_bases
AGTGTCTTCGAGGCAACTGCATTTATATTGCGACCAATCGGTGCACCATTTCAGAATCAGCTCTGACGTAATGACTCGTC
TTCGACTCTATCCGGCTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MVTKSKRPKSGDRSGREPGNAGPIEQGDYLDGQLLIAMPVMEDERFARSVIYICAHSSEGAMGIIVNRPAGSIDFPELLV
QLDIVEKPEQIKLPDHAESMKVLRGGPVETGRGFVLHSSDFFIKDATLPIDDGISLTATVDILRAIASGAGPKHAILALG
YAGWAPGQLETEIQDNGWLHCDADADLVFGNDIEEKYDRALHKLGIEPGMLSAEAGHA

Sequences:

>Translated_218_residues
MVTKSKRPKSGDRSGREPGNAGPIEQGDYLDGQLLIAMPVMEDERFARSVIYICAHSSEGAMGIIVNRPAGSIDFPELLV
QLDIVEKPEQIKLPDHAESMKVLRGGPVETGRGFVLHSSDFFIKDATLPIDDGISLTATVDILRAIASGAGPKHAILALG
YAGWAPGQLETEIQDNGWLHCDADADLVFGNDIEEKYDRALHKLGIEPGMLSAEAGHA
>Mature_218_residues
MVTKSKRPKSGDRSGREPGNAGPIEQGDYLDGQLLIAMPVMEDERFARSVIYICAHSSEGAMGIIVNRPAGSIDFPELLV
QLDIVEKPEQIKLPDHAESMKVLRGGPVETGRGFVLHSSDFFIKDATLPIDDGISLTATVDILRAIASGAGPKHAILALG
YAGWAPGQLETEIQDNGWLHCDADADLVFGNDIEEKYDRALHKLGIEPGMLSAEAGHA

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=193, Percent_Identity=38.3419689119171, Blast_Score=135, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4502_RHOP2 (Q2IRH5)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_488096.1
- HSSP:   Q8EBZ9
- ProteinModelPortal:   Q2IRH5
- SMR:   Q2IRH5
- STRING:   Q2IRH5
- GeneID:   3912318
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_4502
- eggNOG:   COG1678
- HOGENOM:   HBG530212
- OMA:   LIAMPGM
- ProtClustDB:   PRK00228
- BioCyc:   RPAL316058:RPB_4502-MONOMER
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 23411; Mature: 23411

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTKSKRPKSGDRSGREPGNAGPIEQGDYLDGQLLIAMPVMEDERFARSVIYICAHSSEG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHEEEEEEEEECCCC
AMGIIVNRPAGSIDFPELLVQLDIVEKPEQIKLPDHAESMKVLRGGPVETGRGFVLHSSD
CEEEEEECCCCCCCHHHHHEEHHCCCCCCEEECCCCHHHHHHHCCCCCCCCCEEEEECCC
FFIKDATLPIDDGISLTATVDILRAIASGAGPKHAILALGYAGWAPGQLETEIQDNGWLH
EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEE
CDADADLVFGNDIEEKYDRALHKLGIEPGMLSAEAGHA
ECCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVTKSKRPKSGDRSGREPGNAGPIEQGDYLDGQLLIAMPVMEDERFARSVIYICAHSSEG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHEEEEEEEEECCCC
AMGIIVNRPAGSIDFPELLVQLDIVEKPEQIKLPDHAESMKVLRGGPVETGRGFVLHSSD
CEEEEEECCCCCCCHHHHHEEHHCCCCCCEEECCCCHHHHHHHCCCCCCCCCEEEEECCC
FFIKDATLPIDDGISLTATVDILRAIASGAGPKHAILALGYAGWAPGQLETEIQDNGWLH
EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEE
CDADADLVFGNDIEEKYDRALHKLGIEPGMLSAEAGHA
ECCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA