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The map label for this gene is yhbV [H]

Identifier: 86751573

GI number: 86751573

Start: 5065109

End: 5066029

Strand: Reverse

Name: yhbV [H]

Synonym: RPB_4475

Alternate gene names: 86751573

Gene position: 5066029-5065109 (Counterclockwise)

Preceding gene: 86751574

Following gene: 86751563

Centisome position: 95.02

GC content: 65.91

Gene sequence:

>921_bases
ATGCAACTCACGCTCGGACCGGTGCTCTACAACTGGAAGCCGGAGGCATGGCGCGACTTCTATTTCCGCATCGCCGATGA
AGCGCCGGTCGACGTCGTGATCGTCGGCGAGGTGGTGTGCTCGAAGCGATCGCCGTTCCTCGAGCCGCACATCCCGGCGG
TGGTCGAACGGCTGTCGAATGCCGGCAAGACCGTGCTGATGGGCTCGCTGACGCTGATGTCGCTGCCGCGCGAGCGCAAG
GCGATGCTCGAGCTCGCCGGCGACGATCAGTTCACCATGGAAGTCAACGATCTCACCTGTCTGGGGATGCTCGGCGGCAA
GCCGCATGCGATCGGCCCGTTCGTCAACATCTACAACGAGGCCACCGCGAAGTATTTTGCCTCGCGCGGCGCGACCAGAA
TTTGTCTGCCGCCGGAATTGCCGCTGTCGGCGATCCGCGCGATCGCGCGCTCGCTGCCCGAGGTGACGTTCGAGGTGTTC
GCGTTCGGCCGGGTGCCGCTGGCGATCTCGGCCCGCTGCTATCACGCCCGGCTCAACAAGCTGTCGAAGGACAATTGCCG
ATTCGTCTGCGAGCAGGATCCCGACGGCCTCGCGGTGACGACGCTCGACGACGAGCCGTTTCTGGCGATGAACGGCGTGC
AGACGCTGTCCTACACCTGCGCCAGCCTGCTCGGCGACATCGACAAACTCCGCGACGCCGGCGCCGGCAGCCTGCGGCTG
TCGCCGCAGCAATGCGACATGGTTGCGGTGGCGCAGCTGTTCCGCGACGTCATCGACGGCAAGCTGGCGGCGAGCGACAG
TGCGGCGAAGCTGTCGGCGATCTATCCGCTGCAACAGTCCAACGGCTTCCTGTTCTCCAAGCCGGGCGCAGCGTTCATCA
CAGACTCGGGCGACGTGCGGCGGATCGTGCCGGCGGCGTGA

Upstream 100 bases:

>100_bases
ACAAGAAGACCTGGCGCTGAGCCACGCGTCGCCGCAGACCTGCAGCGCGACAACAAGGCGCGCAAACGCAGCACCGCCAA
CTCACAACGAGGCTATTCCC

Downstream 100 bases:

>100_bases
TAACCCTCTCACCGGGTGCTGACCAACCCTCTCCCCTCGTGGGAGAGGGTGGCTTCGCGCAGCGAAGCCGGGTGAGGGGG
CCGCGGGCACGGCGTCCGCG

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MQLTLGPVLYNWKPEAWRDFYFRIADEAPVDVVIVGEVVCSKRSPFLEPHIPAVVERLSNAGKTVLMGSLTLMSLPRERK
AMLELAGDDQFTMEVNDLTCLGMLGGKPHAIGPFVNIYNEATAKYFASRGATRICLPPELPLSAIRAIARSLPEVTFEVF
AFGRVPLAISARCYHARLNKLSKDNCRFVCEQDPDGLAVTTLDDEPFLAMNGVQTLSYTCASLLGDIDKLRDAGAGSLRL
SPQQCDMVAVAQLFRDVIDGKLAASDSAAKLSAIYPLQQSNGFLFSKPGAAFITDSGDVRRIVPAA

Sequences:

>Translated_306_residues
MQLTLGPVLYNWKPEAWRDFYFRIADEAPVDVVIVGEVVCSKRSPFLEPHIPAVVERLSNAGKTVLMGSLTLMSLPRERK
AMLELAGDDQFTMEVNDLTCLGMLGGKPHAIGPFVNIYNEATAKYFASRGATRICLPPELPLSAIRAIARSLPEVTFEVF
AFGRVPLAISARCYHARLNKLSKDNCRFVCEQDPDGLAVTTLDDEPFLAMNGVQTLSYTCASLLGDIDKLRDAGAGSLRL
SPQQCDMVAVAQLFRDVIDGKLAASDSAAKLSAIYPLQQSNGFLFSKPGAAFITDSGDVRRIVPAA
>Mature_306_residues
MQLTLGPVLYNWKPEAWRDFYFRIADEAPVDVVIVGEVVCSKRSPFLEPHIPAVVERLSNAGKTVLMGSLTLMSLPRERK
AMLELAGDDQFTMEVNDLTCLGMLGGKPHAIGPFVNIYNEATAKYFASRGATRICLPPELPLSAIRAIARSLPEVTFEVF
AFGRVPLAISARCYHARLNKLSKDNCRFVCEQDPDGLAVTTLDDEPFLAMNGVQTLSYTCASLLGDIDKLRDAGAGSLRL
SPQQCDMVAVAQLFRDVIDGKLAASDSAAKLSAIYPLQQSNGFLFSKPGAAFITDSGDVRRIVPAA

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=271, Percent_Identity=30.6273062730627, Blast_Score=132, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 33274; Mature: 33274

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTLGPVLYNWKPEAWRDFYFRIADEAPVDVVIVGEVVCSKRSPFLEPHIPAVVERLSN
CEEEECCEEECCCCHHHHHHHEEECCCCCEEEEEECHHHHCCCCCCCCCCHHHHHHHHHC
AGKTVLMGSLTLMSLPRERKAMLELAGDDQFTMEVNDLTCLGMLGGKPHAIGPFVNIYNE
CCCEEEEECHHHHHCCHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCHHHHHHHH
ATAKYFASRGATRICLPPELPLSAIRAIARSLPEVTFEVFAFGRVPLAISARCYHARLNK
HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHEEEHHEECCCCEEEEHHHHHHHHHC
LSKDNCRFVCEQDPDGLAVTTLDDEPFLAMNGVQTLSYTCASLLGDIDKLRDAGAGSLRL
CCCCCCEEEECCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
SPQQCDMVAVAQLFRDVIDGKLAASDSAAKLSAIYPLQQSNGFLFSKPGAAFITDSGDVR
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCEEEECCCCCE
RIVPAA
ECCCCC
>Mature Secondary Structure
MQLTLGPVLYNWKPEAWRDFYFRIADEAPVDVVIVGEVVCSKRSPFLEPHIPAVVERLSN
CEEEECCEEECCCCHHHHHHHEEECCCCCEEEEEECHHHHCCCCCCCCCCHHHHHHHHHC
AGKTVLMGSLTLMSLPRERKAMLELAGDDQFTMEVNDLTCLGMLGGKPHAIGPFVNIYNE
CCCEEEEECHHHHHCCHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCHHHHHHHH
ATAKYFASRGATRICLPPELPLSAIRAIARSLPEVTFEVFAFGRVPLAISARCYHARLNK
HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHEEEHHEECCCCEEEEHHHHHHHHHC
LSKDNCRFVCEQDPDGLAVTTLDDEPFLAMNGVQTLSYTCASLLGDIDKLRDAGAGSLRL
CCCCCCEEEECCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
SPQQCDMVAVAQLFRDVIDGKLAASDSAAKLSAIYPLQQSNGFLFSKPGAAFITDSGDVR
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCEEEECCCCCE
RIVPAA
ECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]