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The map label for this gene is pucBB [H]

Identifier: 86751546

GI number: 86751546

Start: 5033284

End: 5033439

Strand: Reverse

Name: pucBB [H]

Synonym: RPB_4448

Alternate gene names: 86751546

Gene position: 5033439-5033284 (Counterclockwise)

Preceding gene: 86751554

Following gene: 86751545

Centisome position: 94.41

GC content: 58.97

Gene sequence:

>156_bases
ATGGCAGACGATCCCAACAAGGTCTGGCCGACTGGCCTGACGATCGCGGAGTCGGAAGAACTCCACAAGCACGTCATCGA
CGGTACGCGCATCTTCGGCGCGATCGCGATCGTCGCGCACTTCCTGGCGTATGTTTACTCGCCCTGGCTGAAATAA

Upstream 100 bases:

>100_bases
AGTGCTGCGACCACACGAACTCGCGTTCGAGGCCGCGGCGAAACGACCTACGTGCAGGTTCAGCACGGAACTAATCGTAA
GTCTCTTAGGAGGTTTCACT

Downstream 100 bases:

>100_bases
GGAGTATCGACAATGAATCAAGGTAGAATCTGGACTGTGGTCAAGCCGACCGTCGGCCTTCCCCTGCTGCTCGGCAGCGT
TGCCGTGATGGTTGTGCTGG

Product: antenna complex, alpha/beta subunit

Products: NA

Alternate protein names: LH II-B beta; Antenna pigment protein beta chain B [H]

Number of amino acids: Translated: 51; Mature: 50

Protein sequence:

>51_residues
MADDPNKVWPTGLTIAESEELHKHVIDGTRIFGAIAIVAHFLAYVYSPWLK

Sequences:

>Translated_51_residues
MADDPNKVWPTGLTIAESEELHKHVIDGTRIFGAIAIVAHFLAYVYSPWLK
>Mature_50_residues
ADDPNKVWPTGLTIAESEELHKHVIDGTRIFGAIAIVAHFLAYVYSPWLK

Specific function: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antena complex beta subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000066
- InterPro:   IPR002362 [H]

Pfam domain/function: PF00556 LHC [H]

EC number: NA

Molecular weight: Translated: 5723; Mature: 5591

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: PS00969 ANTENNA_COMP_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDPNKVWPTGLTIAESEELHKHVIDGTRIFGAIAIVAHFLAYVYSPWLK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADDPNKVWPTGLTIAESEELHKHVIDGTRIFGAIAIVAHFLAYVYSPWLK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2670551; 7693467 [H]