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The map label for this gene is pucAD [H]

Identifier: 86751545

GI number: 86751545

Start: 5033092

End: 5033271

Strand: Reverse

Name: pucAD [H]

Synonym: RPB_4447

Alternate gene names: 86751545

Gene position: 5033271-5033092 (Counterclockwise)

Preceding gene: 86751546

Following gene: 86751544

Centisome position: 94.4

GC content: 60.0

Gene sequence:

>180_bases
ATGAATCAAGGTAGAATCTGGACTGTGGTCAAGCCGACCGTCGGCCTTCCCCTGCTGCTCGGCAGCGTTGCCGTGATGGT
TGTGCTGGTTCACTTCGCCGTCCTCACCCACACCACCTGGGTCGCGAAGTTCATGAACGGCAAGACCGCGGCGATCGAGA
GCTCGATCTCCATCGGCTGA

Upstream 100 bases:

>100_bases
GCACGTCATCGACGGTACGCGCATCTTCGGCGCGATCGCGATCGTCGCGCACTTCCTGGCGTATGTTTACTCGCCCTGGC
TGAAATAAGGAGTATCGACA

Downstream 100 bases:

>100_bases
TAACAGCGTCTGTTGCTGTTCGGCTGGCCGGGACCCATGGGTCCCGGCCGGTTGTCCAGCGGCGGAGCCGGCAGAGAAGC
CGGACCGCCCCTCGCATGCC

Product: antenna complex, alpha/beta subunit

Products: NA

Alternate protein names: Antenna pigment protein alpha chain D; LH II-D alpha [H]

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MNQGRIWTVVKPTVGLPLLLGSVAVMVVLVHFAVLTHTTWVAKFMNGKTAAIESSISIG

Sequences:

>Translated_59_residues
MNQGRIWTVVKPTVGLPLLLGSVAVMVVLVHFAVLTHTTWVAKFMNGKTAAIESSISIG
>Mature_59_residues
MNQGRIWTVVKPTVGLPLLLGSVAVMVVLVHFAVLTHTTWVAKFMNGKTAAIESSISIG

Specific function: Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antena complex alpha subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000066
- InterPro:   IPR002361
- InterPro:   IPR018332 [H]

Pfam domain/function: PF00556 LHC [H]

EC number: NA

Molecular weight: Translated: 6292; Mature: 6292

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: PS00968 ANTENNA_COMP_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQGRIWTVVKPTVGLPLLLGSVAVMVVLVHFAVLTHTTWVAKFMNGKTAAIESSISIG
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC
>Mature Secondary Structure
MNQGRIWTVVKPTVGLPLLLGSVAVMVVLVHFAVLTHTTWVAKFMNGKTAAIESSISIG
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2670551 [H]