Click here to switch to the map view.

The map label for this gene is pucC [H]

Identifier: 86751084

GI number: 86751084

Start: 4539177

End: 4540610

Strand: Reverse

Name: pucC [H]

Synonym: RPB_3976

Alternate gene names: 86751084

Gene position: 4540610-4539177 (Counterclockwise)

Preceding gene: 86751085

Following gene: 86751083

Centisome position: 85.16

GC content: 67.22

Gene sequence:

>1434_bases
ATGAGCCAGATGGCGGCGACATTGGCGAAAGGCTGGATGCGTCTCGGGACGCGTTTCCTGCCGTTCGCCGACGCGGCGAC
GAAAGAGCTCCCGCTCGGCCGTCTGCTGCGCCTGTCGCTGTTTCAGGTCTCTGTCGGCGCTTCGGTGGTGCTGCTCAACG
GCACGCTGAACCGGGTGATGATCGTCGAGCTCGGCGTCTCGACGCTGCTGGTCTCGCTGATGGTGTCGCTGCCACTGATC
TTCGCGCCGTTCCGCGTGCTGATCGGATTCAAGTCGGACAACCACCGCTCGGTGCTGGGCTGGCGTCGTGTGCCTTATAT
CTGGATGGGCACGATGCTGCAGTTCGGCGGCTTCGCGATCATGCCATTCGCGCTGCTGGTGCTGTCCGGCGGCGGCGAGT
ATCCGGCGGTCTATGGTCAGATCGGCGCTGCTCTGGCGTTCTTGCTTGTCGGCGCCGGGCTGCACACGACGCAGACCGCC
GGCCTTGCGCTCGCCACCGATCTGGCGCCGGAAGAATCGCGGCCGCGGGTCGTCGCGTTCCTTTACGTGATGCTGCTCGT
CGGGATGACCGGCAGCGCGCTGCTGTTCAGCGAACTGCTCCGCGACTTCAGCGAGCTTCAACTGATCCAGGTGATTCAGG
GCGTCGCCGTCGCCCAGTTGCTGCTCAACATCGCTGCGCTGTGGAAGCAGGAGGCGCGCAATCCCGCGCTCACCTCGGCG
ACCCGTCCGCGGCCGCAGTTCAATCAATCTTGGGCGCGGTTCCGCGCTGCCGGCGGTTCGAACCGGATGCTGGTCGCGGT
CGCGCTCGGTACCGCGGGATTCTCCATGCAGGACATCCTGCTGGAGCCTTACGGCGCCGAAGTGCTGAAGCTCTCCGTCG
GTCAGACCACGGCGCTGACCGCGTTTTTCGCGCTCGGCACGCTGGCCGGCTTCGGCCTCGCGGCGCGGACGCTCGGACGC
GGCAGCGATCCGTATCGGATCGCCGGCTTCGGCGCGCTGATCGGCATCTTCGCGTTTGCGGCCGTCGCGCTGGCGGCGCC
GGCGCAATCGGTTGTTCTGTTCCGGATCGGCACCGCGCTGATCGGGCTGGGCGGAGGCCTGTTCGCGGCCGGCACGCTGA
CCGCAGCGATGCAGATCGGTTCCGACAGCGAACCCGGGCTCGCGCTCGGTGCCTGGGGCGCGGTGCAGGCCACCGCGGCG
GGCGGCGGCATCCTGCTCGGCGGCGGTCTGCGCGATTTGTTCGCTTCGCTCGCCGACAGCGGCATGCTCGGCGCCGTGCT
GTCGGGGCCCGCGATCGGTTACGGCTTCGTCTACAACATCGAGATCGCGTTGCTGTTCGCAACGTTGGTTGCGGTAGGTC
CTCTCGTGCGGGTCGCACGGCCGAACTACGCGCAGCCTTCATCCAAGTTCGGCCTAGCCGAATTTCCAGGTTAA

Upstream 100 bases:

>100_bases
TGATTTCCGAAGAGCCGCAGCTGACGCAGTGGCAGCCCGGCCGGACCCACCGCGTGTCGTCCGGTTTCTACACCTCGCAG
GCCTTGGAGATGGTTCGACG

Downstream 100 bases:

>100_bases
CAAAGAGGAAGGGGTCGGTCCCATGCAACCCGGAGCGTATTTGGACTTAGCACAGGTTACCCTGTACGTATTTTGGATCT
TCTTCGCAGGCTTGCTCTTC

Product: LhaA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MSQMAATLAKGWMRLGTRFLPFADAATKELPLGRLLRLSLFQVSVGASVVLLNGTLNRVMIVELGVSTLLVSLMVSLPLI
FAPFRVLIGFKSDNHRSVLGWRRVPYIWMGTMLQFGGFAIMPFALLVLSGGGEYPAVYGQIGAALAFLLVGAGLHTTQTA
GLALATDLAPEESRPRVVAFLYVMLLVGMTGSALLFSELLRDFSELQLIQVIQGVAVAQLLLNIAALWKQEARNPALTSA
TRPRPQFNQSWARFRAAGGSNRMLVAVALGTAGFSMQDILLEPYGAEVLKLSVGQTTALTAFFALGTLAGFGLAARTLGR
GSDPYRIAGFGALIGIFAFAAVALAAPAQSVVLFRIGTALIGLGGGLFAAGTLTAAMQIGSDSEPGLALGAWGAVQATAA
GGGILLGGGLRDLFASLADSGMLGAVLSGPAIGYGFVYNIEIALLFATLVAVGPLVRVARPNYAQPSSKFGLAEFPG

Sequences:

>Translated_477_residues
MSQMAATLAKGWMRLGTRFLPFADAATKELPLGRLLRLSLFQVSVGASVVLLNGTLNRVMIVELGVSTLLVSLMVSLPLI
FAPFRVLIGFKSDNHRSVLGWRRVPYIWMGTMLQFGGFAIMPFALLVLSGGGEYPAVYGQIGAALAFLLVGAGLHTTQTA
GLALATDLAPEESRPRVVAFLYVMLLVGMTGSALLFSELLRDFSELQLIQVIQGVAVAQLLLNIAALWKQEARNPALTSA
TRPRPQFNQSWARFRAAGGSNRMLVAVALGTAGFSMQDILLEPYGAEVLKLSVGQTTALTAFFALGTLAGFGLAARTLGR
GSDPYRIAGFGALIGIFAFAAVALAAPAQSVVLFRIGTALIGLGGGLFAAGTLTAAMQIGSDSEPGLALGAWGAVQATAA
GGGILLGGGLRDLFASLADSGMLGAVLSGPAIGYGFVYNIEIALLFATLVAVGPLVRVARPNYAQPSSKFGLAEFPG
>Mature_476_residues
SQMAATLAKGWMRLGTRFLPFADAATKELPLGRLLRLSLFQVSVGASVVLLNGTLNRVMIVELGVSTLLVSLMVSLPLIF
APFRVLIGFKSDNHRSVLGWRRVPYIWMGTMLQFGGFAIMPFALLVLSGGGEYPAVYGQIGAALAFLLVGAGLHTTQTAG
LALATDLAPEESRPRVVAFLYVMLLVGMTGSALLFSELLRDFSELQLIQVIQGVAVAQLLLNIAALWKQEARNPALTSAT
RPRPQFNQSWARFRAAGGSNRMLVAVALGTAGFSMQDILLEPYGAEVLKLSVGQTTALTAFFALGTLAGFGLAARTLGRG
SDPYRIAGFGALIGIFAFAAVALAAPAQSVVLFRIGTALIGLGGGLFAAGTLTAAMQIGSDSEPGLALGAWGAVQATAAG
GGILLGGGLRDLFASLADSGMLGAVLSGPAIGYGFVYNIEIALLFATLVAVGPLVRVARPNYAQPSSKFGLAEFPG

Specific function: PucC is required for high-level transcription of the puc operon [H]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pucC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR004896 [H]

Pfam domain/function: PF03209 PUCC [H]

EC number: NA

Molecular weight: Translated: 49624; Mature: 49493

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQMAATLAKGWMRLGTRFLPFADAATKELPLGRLLRLSLFQVSVGASVVLLNGTLNRVM
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCEEEEEECCCCEEE
IVELGVSTLLVSLMVSLPLIFAPFRVLIGFKSDNHRSVLGWRRVPYIWMGTMLQFGGFAI
EEECCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHCCCCHHHHHHHHHHCCHHH
MPFALLVLSGGGEYPAVYGQIGAALAFLLVGAGLHTTQTAGLALATDLAPEESRPRVVAF
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCEEEEECCCCCCCCCHHHHH
LYVMLLVGMTGSALLFSELLRDFSELQLIQVIQGVAVAQLLLNIAALWKQEARNPALTSA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TRPRPQFNQSWARFRAAGGSNRMLVAVALGTAGFSMQDILLEPYGAEVLKLSVGQTTALT
CCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEEECCCHHHHH
AFFALGTLAGFGLAARTLGRGSDPYRIAGFGALIGIFAFAAVALAAPAQSVVLFRIGTAL
HHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IGLGGGLFAAGTLTAAMQIGSDSEPGLALGAWGAVQATAAGGGILLGGGLRDLFASLADS
HHCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCEEECCCHHHHHHHHHCC
GMLGAVLSGPAIGYGFVYNIEIALLFATLVAVGPLVRVARPNYAQPSSKFGLAEFPG
CCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQMAATLAKGWMRLGTRFLPFADAATKELPLGRLLRLSLFQVSVGASVVLLNGTLNRVM
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCEEEEEECCCCEEE
IVELGVSTLLVSLMVSLPLIFAPFRVLIGFKSDNHRSVLGWRRVPYIWMGTMLQFGGFAI
EEECCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHCCCCHHHHHHHHHHCCHHH
MPFALLVLSGGGEYPAVYGQIGAALAFLLVGAGLHTTQTAGLALATDLAPEESRPRVVAF
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCEEEEECCCCCCCCCHHHHH
LYVMLLVGMTGSALLFSELLRDFSELQLIQVIQGVAVAQLLLNIAALWKQEARNPALTSA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TRPRPQFNQSWARFRAAGGSNRMLVAVALGTAGFSMQDILLEPYGAEVLKLSVGQTTALT
CCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEEECCCHHHHH
AFFALGTLAGFGLAARTLGRGSDPYRIAGFGALIGIFAFAAVALAAPAQSVVLFRIGTAL
HHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IGLGGGLFAAGTLTAAMQIGSDSEPGLALGAWGAVQATAAGGGILLGGGLRDLFASLADS
HHCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCEEECCCHHHHHHHHHCC
GMLGAVLSGPAIGYGFVYNIEIALLFATLVAVGPLVRVARPNYAQPSSKFGLAEFPG
CCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9130598 [H]