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The map label for this gene is puhA [H]

Identifier: 86751083

GI number: 86751083

Start: 4538390

End: 4539154

Strand: Reverse

Name: puhA [H]

Synonym: RPB_3975

Alternate gene names: 86751083

Gene position: 4539154-4538390 (Counterclockwise)

Preceding gene: 86751084

Following gene: 86751082

Centisome position: 85.14

GC content: 65.23

Gene sequence:

>765_bases
ATGCAACCCGGAGCGTATTTGGACTTAGCACAGGTTACCCTGTACGTATTTTGGATCTTCTTCGCAGGCTTGCTCTTCTA
TCTTCGCCGTGAAGACAAGCGCGAAGGATATCCGCTGATCCCCGACACCGGCACGGGCCGGCTGCGGAAGACCGGCATTC
CGGCTTCGCCGGATCCGAAGACCTATCTGCTGCGCGGTGGTGCGACCCGGACCGTGCCGAGCGTCAGCAACGATCGTCCC
AACGTCGCGCTGGCTCCGGTCGCTCCGTGGCCGGGTGCAGCGTTCGCGCCGACCGGCGACCCGTTCGCCGACGGCGTCGG
CCCCGGCTCCTACGCCCAGCGTCAGGACGTTCCGGAGGCCGGACTCGACAACCTGCCGATCATCGCGCCGCTGCGTGCGG
CGAAGGGCATGTTCCTCGATCCGCGTGACCCCAATCCGGTCGGCATGCCGGTGATCGGCTGTGACGGCCAGGTCGGCGGC
ACGGTGACCGAGGTCTGGGTCGACCGGGCCGAAGTCATTGCCCGCTATCTCGAAGTCGAGGTCGCAAAGAGCAAGAAGCG
CGTGCTTCTGCCGGTTCCGTTCGCGCTGATCAACAGCCCGAGCGGCCGTGTGTCCGTCGATGCCATTCGTGGCGACCAGT
TCGCTGGCGTCCCGACCATCGCCAAGGCGGATCAGGTCACCAAGCTCGAAGAAGACAAGATCTGTGCCTACTACGGCGCC
GGCACGCTCTACGCCACGCCGATGCGTCAGGAGCCGATCGTATGA

Upstream 100 bases:

>100_bases
GGTCCTCTCGTGCGGGTCGCACGGCCGAACTACGCGCAGCCTTCATCCAAGTTCGGCCTAGCCGAATTTCCAGGTTAACA
AAGAGGAAGGGGTCGGTCCC

Downstream 100 bases:

>100_bases
CGGACGTCCCCAGCCAGTTTCGTGAACTTCCATCGCCCTTGCCGGAGGGAGAGCGCGTTCTCTGGCAGGGGAAGCCGACC
TACAAAGGTCTGGCGATCAG

Product: photosynthetic reaction centre, H-chain

Products: NA

Alternate protein names: Photosynthetic reaction center H subunit [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MQPGAYLDLAQVTLYVFWIFFAGLLFYLRREDKREGYPLIPDTGTGRLRKTGIPASPDPKTYLLRGGATRTVPSVSNDRP
NVALAPVAPWPGAAFAPTGDPFADGVGPGSYAQRQDVPEAGLDNLPIIAPLRAAKGMFLDPRDPNPVGMPVIGCDGQVGG
TVTEVWVDRAEVIARYLEVEVAKSKKRVLLPVPFALINSPSGRVSVDAIRGDQFAGVPTIAKADQVTKLEEDKICAYYGA
GTLYATPMRQEPIV

Sequences:

>Translated_254_residues
MQPGAYLDLAQVTLYVFWIFFAGLLFYLRREDKREGYPLIPDTGTGRLRKTGIPASPDPKTYLLRGGATRTVPSVSNDRP
NVALAPVAPWPGAAFAPTGDPFADGVGPGSYAQRQDVPEAGLDNLPIIAPLRAAKGMFLDPRDPNPVGMPVIGCDGQVGG
TVTEVWVDRAEVIARYLEVEVAKSKKRVLLPVPFALINSPSGRVSVDAIRGDQFAGVPTIAKADQVTKLEEDKICAYYGA
GTLYATPMRQEPIV
>Mature_254_residues
MQPGAYLDLAQVTLYVFWIFFAGLLFYLRREDKREGYPLIPDTGTGRLRKTGIPASPDPKTYLLRGGATRTVPSVSNDRP
NVALAPVAPWPGAAFAPTGDPFADGVGPGSYAQRQDVPEAGLDNLPIIAPLRAAKGMFLDPRDPNPVGMPVIGCDGQVGG
TVTEVWVDRAEVIARYLEVEVAKSKKRVLLPVPFALINSPSGRVSVDAIRGDQFAGVPTIAKADQVTKLEEDKICAYYGA
GTLYATPMRQEPIV

Specific function: The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular chromatophore membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the reaction center puhA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005652
- InterPro:   IPR014747
- InterPro:   IPR015810
- InterPro:   IPR007903
- InterPro:   IPR011033 [H]

Pfam domain/function: PF05239 PRC; PF03967 PRCH [H]

EC number: NA

Molecular weight: Translated: 27309; Mature: 27309

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPGAYLDLAQVTLYVFWIFFAGLLFYLRREDKREGYPLIPDTGTGRLRKTGIPASPDPK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCC
TYLLRGGATRTVPSVSNDRPNVALAPVAPWPGAAFAPTGDPFADGVGPGSYAQRQDVPEA
EEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
GLDNLPIIAPLRAAKGMFLDPRDPNPVGMPVIGCDGQVGGTVTEVWVDRAEVIARYLEVE
CCCCCCEEECHHHCCCCEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
VAKSKKRVLLPVPFALINSPSGRVSVDAIRGDQFAGVPTIAKADQVTKLEEDKICAYYGA
HHCCCCEEEEECCHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEEEECC
GTLYATPMRQEPIV
CEEEECCCCCCCCC
>Mature Secondary Structure
MQPGAYLDLAQVTLYVFWIFFAGLLFYLRREDKREGYPLIPDTGTGRLRKTGIPASPDPK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCC
TYLLRGGATRTVPSVSNDRPNVALAPVAPWPGAAFAPTGDPFADGVGPGSYAQRQDVPEA
EEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
GLDNLPIIAPLRAAKGMFLDPRDPNPVGMPVIGCDGQVGGTVTEVWVDRAEVIARYLEVE
CCCCCCEEECHHHCCCCEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
VAKSKKRVLLPVPFALINSPSGRVSVDAIRGDQFAGVPTIAKADQVTKLEEDKICAYYGA
HHCCCCEEEEECCHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEEEECC
GTLYATPMRQEPIV
CEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10648776 [H]