| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cutL [H]
Identifier: 86751065
GI number: 86751065
Start: 4515405
End: 4517735
Strand: Reverse
Name: cutL [H]
Synonym: RPB_3957
Alternate gene names: 86751065
Gene position: 4517735-4515405 (Counterclockwise)
Preceding gene: 86751066
Following gene: 86751064
Centisome position: 84.73
GC content: 68.51
Gene sequence:
>2331_bases ATGAACATTCTTCCCGGCTCCATGCGGTTCGGCGCGGGGCAGCCCGTCAAGCGTCTCGAGGATCAGCGGCTCGTCACCGG ACACGGGCACTATCTCGACGACAAGCCCGCCGACGGCGCGTTGTGGCTGGTGGTGCTGCGCTCACCACACGCGCACGCCA AGATCGTCTCGATCGATGCCGAGGCGGCGCGCGCGATGCCGGGAGTCGAAAGCGTTCTGACCGGCGCGGACCTCGTCGCC GACGAGATCGGCACGATCCCGACCCTGCCGATCTTCAAGCGGCCGGACGGTTCGCCGATGCTGCTGCCGCCGCGCCGGCT CTTGGCGCACGAGATCGTCCGCTTCGTCGGCGAGCCGGTCGCCGCGGTGATCGCGGCGTCGCAGGCCGCGGCGCAGGCTG CGGCCGAGGCGGTCGTCGTCGAGTATGAAGAATTGCCGGCGGTGACCGATCCGGTCGCGGCGATCCAGCCCGGCGCGCCG GTGGTGGTCGAGACCGCGCCCGACAACATCGTCGCGGCGATGAGCTATGGCGATGCCGCCAAGGTCGATGAGGCTTTCGC CAGCGCCGCGCACACCGTGTCGCTCGACATCGTCAGCCAGCGCCTGATCCCCTCGGCGATGGAGCCGCGCGCCACTATCG CGGAAATCGAGAAGAAGACCGGCCGGCTGATCCTGCACGTGCAGTCGCAGACGCCGGCGCAGACCCGCGACGCGCTCGCC GACGCGATCCTGAAGCGGCCGAAGGAGTCGATCCAGGTGCTGGTCGGCGACATCGGCGGCGGTTTCGGCCAGAAGACCGG CGTCTATCCCGAGGACGCGCTGGTGGCCTATGCGGCGGTGAAGCTCAACAAGAAGATCCGCTGGCGCGGGGACCGCACCG ACGAATTCGTCGGTGGCACCCATGGCCGCGACCTGACCTCGACCGCGTCGATCGCGCTCGACGCCAAGGGCCGCGTGCTG GCCTATCGGGTGTCGTCGATCGGCGGCACCGGCGCGTATCTCGCCGGCGCCGGCGTGATCATTCCGCTGGTGCTCGGCCC GTTCGTGCAGACCGGCGTCTATGATCTGCCGCTGGTGCATTTCGACATCAAGGCGGTGATGACCCACACCGCGCCCGTCG GCGCCTATCGCGGCGCAGGCCGCCCGGAAGCCGTGTACATCATCGAGCGCCTGATGGACGCCGCGGCGCGCCAGCTGAAC ATGGACCCGCGCGCGATCCGCAAGGTCAACTACATCAAGCCGACGCAACTGCCCTACACCAACGCGGTCGGGCAGGTGTA CGATTCGGGCGCCTTCGCGCATCTGATGCAGCGCGCGACCGAGCTGTCCGACTGGGACGGCTTCAAGGCGCGCAAGAAGG AAGCGCAGAAGAAGGGCCTGCTCTACGGCCGCGGCGTCACCAGCTACATCGAATGGACCGGCGGCCGCGCCCACACCGAG AAGGTCAGCCTGCACGCCACCGCGGAAGGCCGCATCGTGCTGCATTCCGGCACGCAGGCGATGGGGCAGGGGCTGGAGAC CACCTACTCGCAGATGATCGCGCAGGCGCTCGACATCCCGATCGAGAGCATCGACGTCGTGCAGGGCAACACCGATCTGG CGCAGGGCTTCGGCAGCGTCGGCTCGCGCTCGCTGTTCGTCGGCGGCACCGCGGTCGCGGTGTCGACCGTCGATATGATC GCCAAAGCGCGCGAGAAGGCCGCGAACATTCTCGAAGCCTCGATCGAGGACATCGAGTATTCCGGCGGCATGCTGACGAT CGCCGGCACCGATCGCAAGATCAGCCTGTTCGAAATCGCCGCCAAGGAAAAAGGTACCAAGCTCAGCGTCGATTCGACCG GCGAAGTCGACGGTCCGAGCTGGCCGAACGGCGCGCATATCTGCGAGGTCGAGGTCGATCCCGAAACCGGCGTCAGCCGT GTGGTGCGCTACACCACGGTCGACGACGTCGGCAATGCGGTCAATCCGATGCTGGTCGCGGGGCAGATCCATGGCGGCGT CGCGCAGGGCGTCGGCCAGGCGCTGTACGAAGGCGCGGCCTATAACGACGACGGCCAGCTGCTGACCGCGAGCTATCAGG ACTACTGCATCCCGCGCGCCGACAATCTGCCGCCGATCAACGTCACGCTCGATCCGTCGGCGCCGTGCCGGACCAATCCG CTCGGCGCCAAGGGCTGCGGCGAATCCGGCGCGATCGGTGGGCCGCCCTGCGTCGTCCACGGCGTGCTCGACGCGCTGGC GCCGCTCGGCGTCACCACGCTGAACACGCCGCTGACCCCGGAAAAGGTGTGGCGGGCGATCCAGGACGCCAAGGCCGCGC AGGCGGCCTGA
Upstream 100 bases:
>100_bases GGAGAGGTTCGGCTTCGCTTCGGGGAGGGGCTTGCCCCTCTTGGCTTACCGCTGCTTTCTCCGCTAAAACCGTTCCAAGC AAGCAACACAAGGAAGCGGC
Downstream 100 bases:
>100_bases CCCGGAGCAGCATCACCGCTCGTCATGCCCGCGCTTGTCGCGGGCATCCACGTCTTCGAGGCTCAACCTCAGCAAAGACG TGGATGGCCGGGACGAGCCC
Product: carbon-monoxide dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 776; Mature: 776
Protein sequence:
>776_residues MNILPGSMRFGAGQPVKRLEDQRLVTGHGHYLDDKPADGALWLVVLRSPHAHAKIVSIDAEAARAMPGVESVLTGADLVA DEIGTIPTLPIFKRPDGSPMLLPPRRLLAHEIVRFVGEPVAAVIAASQAAAQAAAEAVVVEYEELPAVTDPVAAIQPGAP VVVETAPDNIVAAMSYGDAAKVDEAFASAAHTVSLDIVSQRLIPSAMEPRATIAEIEKKTGRLILHVQSQTPAQTRDALA DAILKRPKESIQVLVGDIGGGFGQKTGVYPEDALVAYAAVKLNKKIRWRGDRTDEFVGGTHGRDLTSTASIALDAKGRVL AYRVSSIGGTGAYLAGAGVIIPLVLGPFVQTGVYDLPLVHFDIKAVMTHTAPVGAYRGAGRPEAVYIIERLMDAAARQLN MDPRAIRKVNYIKPTQLPYTNAVGQVYDSGAFAHLMQRATELSDWDGFKARKKEAQKKGLLYGRGVTSYIEWTGGRAHTE KVSLHATAEGRIVLHSGTQAMGQGLETTYSQMIAQALDIPIESIDVVQGNTDLAQGFGSVGSRSLFVGGTAVAVSTVDMI AKAREKAANILEASIEDIEYSGGMLTIAGTDRKISLFEIAAKEKGTKLSVDSTGEVDGPSWPNGAHICEVEVDPETGVSR VVRYTTVDDVGNAVNPMLVAGQIHGGVAQGVGQALYEGAAYNDDGQLLTASYQDYCIPRADNLPPINVTLDPSAPCRTNP LGAKGCGESGAIGGPPCVVHGVLDALAPLGVTTLNTPLTPEKVWRAIQDAKAAQAA
Sequences:
>Translated_776_residues MNILPGSMRFGAGQPVKRLEDQRLVTGHGHYLDDKPADGALWLVVLRSPHAHAKIVSIDAEAARAMPGVESVLTGADLVA DEIGTIPTLPIFKRPDGSPMLLPPRRLLAHEIVRFVGEPVAAVIAASQAAAQAAAEAVVVEYEELPAVTDPVAAIQPGAP VVVETAPDNIVAAMSYGDAAKVDEAFASAAHTVSLDIVSQRLIPSAMEPRATIAEIEKKTGRLILHVQSQTPAQTRDALA DAILKRPKESIQVLVGDIGGGFGQKTGVYPEDALVAYAAVKLNKKIRWRGDRTDEFVGGTHGRDLTSTASIALDAKGRVL AYRVSSIGGTGAYLAGAGVIIPLVLGPFVQTGVYDLPLVHFDIKAVMTHTAPVGAYRGAGRPEAVYIIERLMDAAARQLN MDPRAIRKVNYIKPTQLPYTNAVGQVYDSGAFAHLMQRATELSDWDGFKARKKEAQKKGLLYGRGVTSYIEWTGGRAHTE KVSLHATAEGRIVLHSGTQAMGQGLETTYSQMIAQALDIPIESIDVVQGNTDLAQGFGSVGSRSLFVGGTAVAVSTVDMI AKAREKAANILEASIEDIEYSGGMLTIAGTDRKISLFEIAAKEKGTKLSVDSTGEVDGPSWPNGAHICEVEVDPETGVSR VVRYTTVDDVGNAVNPMLVAGQIHGGVAQGVGQALYEGAAYNDDGQLLTASYQDYCIPRADNLPPINVTLDPSAPCRTNP LGAKGCGESGAIGGPPCVVHGVLDALAPLGVTTLNTPLTPEKVWRAIQDAKAAQAA >Mature_776_residues MNILPGSMRFGAGQPVKRLEDQRLVTGHGHYLDDKPADGALWLVVLRSPHAHAKIVSIDAEAARAMPGVESVLTGADLVA DEIGTIPTLPIFKRPDGSPMLLPPRRLLAHEIVRFVGEPVAAVIAASQAAAQAAAEAVVVEYEELPAVTDPVAAIQPGAP VVVETAPDNIVAAMSYGDAAKVDEAFASAAHTVSLDIVSQRLIPSAMEPRATIAEIEKKTGRLILHVQSQTPAQTRDALA DAILKRPKESIQVLVGDIGGGFGQKTGVYPEDALVAYAAVKLNKKIRWRGDRTDEFVGGTHGRDLTSTASIALDAKGRVL AYRVSSIGGTGAYLAGAGVIIPLVLGPFVQTGVYDLPLVHFDIKAVMTHTAPVGAYRGAGRPEAVYIIERLMDAAARQLN MDPRAIRKVNYIKPTQLPYTNAVGQVYDSGAFAHLMQRATELSDWDGFKARKKEAQKKGLLYGRGVTSYIEWTGGRAHTE KVSLHATAEGRIVLHSGTQAMGQGLETTYSQMIAQALDIPIESIDVVQGNTDLAQGFGSVGSRSLFVGGTAVAVSTVDMI AKAREKAANILEASIEDIEYSGGMLTIAGTDRKISLFEIAAKEKGTKLSVDSTGEVDGPSWPNGAHICEVEVDPETGVSR VVRYTTVDDVGNAVNPMLVAGQIHGGVAQGVGQALYEGAAYNDDGQLLTASYQDYCIPRADNLPPINVTLDPSAPCRTNP LGAKGCGESGAIGGPPCVVHGVLDALAPLGVTTLNTPLTPEKVWRAIQDAKAAQAA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=788, Percent_Identity=27.0304568527919, Blast_Score=188, Evalue=2e-47, Organism=Homo sapiens, GI91823271, Length=792, Percent_Identity=25.6313131313131, Blast_Score=167, Evalue=4e-41, Organism=Escherichia coli, GI1789246, Length=810, Percent_Identity=26.5432098765432, Blast_Score=221, Evalue=2e-58, Organism=Escherichia coli, GI1789230, Length=774, Percent_Identity=26.2273901808786, Blast_Score=191, Evalue=2e-49, Organism=Escherichia coli, GI1786478, Length=779, Percent_Identity=25.0320924261874, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17539860, Length=715, Percent_Identity=26.4335664335664, Blast_Score=155, Evalue=6e-38, Organism=Caenorhabditis elegans, GI17540638, Length=801, Percent_Identity=24.2197253433208, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI32566215, Length=493, Percent_Identity=26.7748478701826, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI17737937, Length=757, Percent_Identity=24.7027741083223, Blast_Score=135, Evalue=1e-31, Organism=Drosophila melanogaster, GI24647193, Length=773, Percent_Identity=25.3557567917206, Blast_Score=121, Evalue=2e-27, Organism=Drosophila melanogaster, GI24647199, Length=793, Percent_Identity=24.0857503152585, Blast_Score=110, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 81689; Mature: 81689
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILPGSMRFGAGQPVKRLEDQRLVTGHGHYLDDKPADGALWLVVLRSPHAHAKIVSIDA CCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECH EAARAMPGVESVLTGADLVADEIGTIPTLPIFKRPDGSPMLLPPRRLLAHEIVRFVGEPV HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEECCHHHHHHHHHHHHHCCCH AAVIAASQAAAQAAAEAVVVEYEELPAVTDPVAAIQPGAPVVVETAPDNIVAAMSYGDAA HHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCHHHCCCCCCEEEEECCCCEEEEECCCCHH KVDEAFASAAHTVSLDIVSQRLIPSAMEPRATIAEIEKKTGRLILHVQSQTPAQTRDALA HHHHHHHHHHHEEEHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHH DAILKRPKESIQVLVGDIGGGFGQKTGVYPEDALVAYAAVKLNKKIRWRGDRTDEFVGGT HHHHHCCCHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHCCCC HGRDLTSTASIALDAKGRVLAYRVSSIGGTGAYLAGAGVIIPLVLGPFVQTGVYDLPLVH CCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCEEE FDIKAVMTHTAPVGAYRGAGRPEAVYIIERLMDAAARQLNMDPRAIRKVNYIKPTQLPYT EEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC NAVGQVYDSGAFAHLMQRATELSDWDGFKARKKEAQKKGLLYGRGVTSYIEWTGGRAHTE HHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEECCCHHEEEECCCCCCCE KVSLHATAEGRIVLHSGTQAMGQGLETTYSQMIAQALDIPIESIDVVQGNTDLAQGFGSV EEEEEEECCCEEEEECCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCC GSRSLFVGGTAVAVSTVDMIAKAREKAANILEASIEDIEYSGGMLTIAGTDRKISLFEIA CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEH AKEKGTKLSVDSTGEVDGPSWPNGAHICEVEVDPETGVSRVVRYTTVDDVGNAVNPMLVA HCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHEEEEEHHHCCCCCCCEEEE GQIHGGVAQGVGQALYEGAAYNDDGQLLTASYQDYCIPRADNLPPINVTLDPSAPCRTNP EECCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCC LGAKGCGESGAIGGPPCVVHGVLDALAPLGVTTLNTPLTPEKVWRAIQDAKAAQAA CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNILPGSMRFGAGQPVKRLEDQRLVTGHGHYLDDKPADGALWLVVLRSPHAHAKIVSIDA CCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECH EAARAMPGVESVLTGADLVADEIGTIPTLPIFKRPDGSPMLLPPRRLLAHEIVRFVGEPV HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEECCHHHHHHHHHHHHHCCCH AAVIAASQAAAQAAAEAVVVEYEELPAVTDPVAAIQPGAPVVVETAPDNIVAAMSYGDAA HHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCHHHCCCCCCEEEEECCCCEEEEECCCCHH KVDEAFASAAHTVSLDIVSQRLIPSAMEPRATIAEIEKKTGRLILHVQSQTPAQTRDALA HHHHHHHHHHHEEEHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHH DAILKRPKESIQVLVGDIGGGFGQKTGVYPEDALVAYAAVKLNKKIRWRGDRTDEFVGGT HHHHHCCCHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHCCCC HGRDLTSTASIALDAKGRVLAYRVSSIGGTGAYLAGAGVIIPLVLGPFVQTGVYDLPLVH CCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCEEE FDIKAVMTHTAPVGAYRGAGRPEAVYIIERLMDAAARQLNMDPRAIRKVNYIKPTQLPYT EEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC NAVGQVYDSGAFAHLMQRATELSDWDGFKARKKEAQKKGLLYGRGVTSYIEWTGGRAHTE HHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEECCCHHEEEECCCCCCCE KVSLHATAEGRIVLHSGTQAMGQGLETTYSQMIAQALDIPIESIDVVQGNTDLAQGFGSV EEEEEEECCCEEEEECCCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCC GSRSLFVGGTAVAVSTVDMIAKAREKAANILEASIEDIEYSGGMLTIAGTDRKISLFEIA CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEH AKEKGTKLSVDSTGEVDGPSWPNGAHICEVEVDPETGVSRVVRYTTVDDVGNAVNPMLVA HCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHEEEEEHHHCCCCCCCEEEE GQIHGGVAQGVGQALYEGAAYNDDGQLLTASYQDYCIPRADNLPPINVTLDPSAPCRTNP EECCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCC LGAKGCGESGAIGGPPCVVHGVLDALAPLGVTTLNTPLTPEKVWRAIQDAKAAQAA CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]