Click here to switch to the map view.

The map label for this gene is 86751057

Identifier: 86751057

GI number: 86751057

Start: 4509610

End: 4510587

Strand: Reverse

Name: 86751057

Synonym: RPB_3949

Alternate gene names: NA

Gene position: 4510587-4509610 (Counterclockwise)

Preceding gene: 86751059

Following gene: 86751056

Centisome position: 84.6

GC content: 72.39

Gene sequence:

>978_bases
GTGGACGAGCATCGCAAAGAGCCCATCATCGGCGACGACAAGGCTGGCGTCGGGGCCGTGCCGGATGCATCGGCGTCTTC
GGCGCAGGCGTCTTCGGATAAGGCGTCCTCGGCACAGGCGTCGGCCGTGAGCGCCGGCGGCGAGGCTGCTGCGTCGGCGG
AGTCCGCGTCCGAGCCGGCCAAGCGGGCCGAGGCCGCGAGCAGTGAAATCGCCCAGCGTCGCCCCGGCAACGTCACCATC
ATGGCGCCGCCGCGCAGACAACAGGATTGGTCTCGCCATTGGGACGACGAGATCGAGGTCGAGGCGCCGGATGAACCCGG
CGAGCCGGCCGCCAAGCCACACGGCAAGCGGCAGCTCGCGCTGGCCGCCGTCGCGGTGATCCTGGCGGCGATCGCCGGCG
CGGCCGGCGGCGCGCTGACCAGCGCGGGCTTCGCGCAAGTCGGCGGCAGCGCCGATGCGACGACCCAGGCGCAGGCGCAG
GCGCGCGCGCTGGACGAGCAGGTGTCCAAGCTGCAGACCGAGCTCGCCGCGCTGAAGGCCAGCGTCGACCGCGCCGACAA
GACCGCCAGCGCCCAGATCGCCAAGGCCAACGACCGAATCGAGAAAGTCGAAAAGGCGCAGGCCGAGCCGGCGCAGAAGA
TCGCCAGACTGAGCGAGACCGTCGAGAAGTTGCGGTCCGCGCAGGCCGAGAAGCCGGCGCCGGCCCCGGCGCAGGTCGCC
TCCGCCGCGCAGGACGTCACCGGTTCGGTGCCGCCGAAGCCGGCAGCGAAGGCCAACGATGTCGGCCGGCTGCCGACGGT
CGAGGGCTGGGTGCTGCGCGAGGTCTATGACGGCGGTGCGGTGATCGTCGGCCGTGCCGGAACGTTCGAAGTCTATGCCG
GCGATCCGGTGCCGGGCCTCGGCCGGGTCGATGCGATCCGCCGCCAGGACGGACGCTGGGTGGTGGTGACCAGCCGCGGC
CTGATCGTCTCGCGCTGA

Upstream 100 bases:

>100_bases
CGGGAGCTGAATCCTGAAATTTTCGTAAGCATCGAAGGAAGTAACGGATTGGCAAGTAATCAAAGTTACCGAATGGTCAA
GCGTATCAGGAGGATTTGAC

Downstream 100 bases:

>100_bases
TCGTCACGTCGGGTTGGAATTCGGCGGCGCGGCGTGTGCAGACACGCTGCGCCGTTTGCTTTAGATTCCCGGGCAATTCC
TGCGCTGCGCCCATGCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MDEHRKEPIIGDDKAGVGAVPDASASSAQASSDKASSAQASAVSAGGEAAASAESASEPAKRAEAASSEIAQRRPGNVTI
MAPPRRQQDWSRHWDDEIEVEAPDEPGEPAAKPHGKRQLALAAVAVILAAIAGAAGGALTSAGFAQVGGSADATTQAQAQ
ARALDEQVSKLQTELAALKASVDRADKTASAQIAKANDRIEKVEKAQAEPAQKIARLSETVEKLRSAQAEKPAPAPAQVA
SAAQDVTGSVPPKPAAKANDVGRLPTVEGWVLREVYDGGAVIVGRAGTFEVYAGDPVPGLGRVDAIRRQDGRWVVVTSRG
LIVSR

Sequences:

>Translated_325_residues
MDEHRKEPIIGDDKAGVGAVPDASASSAQASSDKASSAQASAVSAGGEAAASAESASEPAKRAEAASSEIAQRRPGNVTI
MAPPRRQQDWSRHWDDEIEVEAPDEPGEPAAKPHGKRQLALAAVAVILAAIAGAAGGALTSAGFAQVGGSADATTQAQAQ
ARALDEQVSKLQTELAALKASVDRADKTASAQIAKANDRIEKVEKAQAEPAQKIARLSETVEKLRSAQAEKPAPAPAQVA
SAAQDVTGSVPPKPAAKANDVGRLPTVEGWVLREVYDGGAVIVGRAGTFEVYAGDPVPGLGRVDAIRRQDGRWVVVTSRG
LIVSR
>Mature_325_residues
MDEHRKEPIIGDDKAGVGAVPDASASSAQASSDKASSAQASAVSAGGEAAASAESASEPAKRAEAASSEIAQRRPGNVTI
MAPPRRQQDWSRHWDDEIEVEAPDEPGEPAAKPHGKRQLALAAVAVILAAIAGAAGGALTSAGFAQVGGSADATTQAQAQ
ARALDEQVSKLQTELAALKASVDRADKTASAQIAKANDRIEKVEKAQAEPAQKIARLSETVEKLRSAQAEKPAPAPAQVA
SAAQDVTGSVPPKPAAKANDVGRLPTVEGWVLREVYDGGAVIVGRAGTFEVYAGDPVPGLGRVDAIRRQDGRWVVVTSRG
LIVSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33329; Mature: 33329

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEHRKEPIIGDDKAGVGAVPDASASSAQASSDKASSAQASAVSAGGEAAASAESASEPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
KRAEAASSEIAQRRPGNVTIMAPPRRQQDWSRHWDDEIEVEAPDEPGEPAAKPHGKRQLA
HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHH
LAAVAVILAAIAGAAGGALTSAGFAQVGGSADATTQAQAQARALDEQVSKLQTELAALKA
HHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVDRADKTASAQIAKANDRIEKVEKAQAEPAQKIARLSETVEKLRSAQAEKPAPAPAQVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
SAAQDVTGSVPPKPAAKANDVGRLPTVEGWVLREVYDGGAVIVGRAGTFEVYAGDPVPGL
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEEEEECCCCCCC
GRVDAIRRQDGRWVVVTSRGLIVSR
CHHHHHHHCCCCEEEEECCCEEECC
>Mature Secondary Structure
MDEHRKEPIIGDDKAGVGAVPDASASSAQASSDKASSAQASAVSAGGEAAASAESASEPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
KRAEAASSEIAQRRPGNVTIMAPPRRQQDWSRHWDDEIEVEAPDEPGEPAAKPHGKRQLA
HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHH
LAAVAVILAAIAGAAGGALTSAGFAQVGGSADATTQAQAQARALDEQVSKLQTELAALKA
HHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVDRADKTASAQIAKANDRIEKVEKAQAEPAQKIARLSETVEKLRSAQAEKPAPAPAQVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
SAAQDVTGSVPPKPAAKANDVGRLPTVEGWVLREVYDGGAVIVGRAGTFEVYAGDPVPGL
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEEEEECCCCCCC
GRVDAIRRQDGRWVVVTSRGLIVSR
CHHHHHHHCCCCEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA