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The map label for this gene is csoR [H]

Identifier: 86750978

GI number: 86750978

Start: 4424509

End: 4424784

Strand: Reverse

Name: csoR [H]

Synonym: RPB_3870

Alternate gene names: 86750978

Gene position: 4424784-4424509 (Counterclockwise)

Preceding gene: 86750981

Following gene: 86750969

Centisome position: 82.99

GC content: 61.96

Gene sequence:

>276_bases
ATGAAATCGGACATCAAGGCGTCATGTCAGAAGCGCCTCGGCAGGATCGAGGGGCAGGTGCGCGGCATCTCCAAAATGCT
GGAGGAGGGCCGCTATTGCATCGACATCGTCACGCAGATCTCCGCGGTCCGCGCGGCGCTGCGTCGGGTCGAGGAAGAGG
TGCTGAAGGATCACGTCGCGCATTGCGTCGAACATGCGATCGCAAGCGGCGACAAGGCCGATCAGCGCCAGAAGATCGCC
GAACTGATGGATGTGATCCAGCGGTCCAGCCGCTGA

Upstream 100 bases:

>100_bases
GCATCCTTGACAGCCGTGCTGCCCCCGGTGTGCTCTGTGTCGTGCATCCTGCGTCGCCTCGGCGCTTGTAACCCATACCG
TGTAGGGGTATATATCGCGA

Downstream 100 bases:

>100_bases
TGTGAGGCATTCCGAGGTCGACCGCGTTGCGGTCGATCAAAATGGGCGCGCGCGGCCGCTCAGTTCGCCTGTCTTTTCTT
GGGAGCCGGGCCGAACAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKSDIKASCQKRLGRIEGQVRGISKMLEEGRYCIDIVTQISAVRAALRRVEEEVLKDHVAHCVEHAIASGDKADQRQKIA
ELMDVIQRSSR

Sequences:

>Translated_91_residues
MKSDIKASCQKRLGRIEGQVRGISKMLEEGRYCIDIVTQISAVRAALRRVEEEVLKDHVAHCVEHAIASGDKADQRQKIA
ELMDVIQRSSR
>Mature_91_residues
MKSDIKASCQKRLGRIEGQVRGISKMLEEGRYCIDIVTQISAVRAALRRVEEEVLKDHVAHCVEHAIASGDKADQRQKIA
ELMDVIQRSSR

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10260; Mature: 10260

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDIKASCQKRLGRIEGQVRGISKMLEEGRYCIDIVTQISAVRAALRRVEEEVLKDHVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HCVEHAIASGDKADQRQKIAELMDVIQRSSR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSDIKASCQKRLGRIEGQVRGISKMLEEGRYCIDIVTQISAVRAALRRVEEEVLKDHVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HCVEHAIASGDKADQRQKIAELMDVIQRSSR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]