Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86750969
Identifier: 86750969
GI number: 86750969
Start: 4416217
End: 4416957
Strand: Reverse
Name: 86750969
Synonym: RPB_3861
Alternate gene names: NA
Gene position: 4416957-4416217 (Counterclockwise)
Preceding gene: 86750978
Following gene: 86750968
Centisome position: 82.84
GC content: 66.67
Gene sequence:
>741_bases GTGTTGCTTGCGCTTTTTGCTGACATCCACGCCAACAGGCAGGCCTTCACGGCATGCCTCGCCAACGCGCGCGAGCAGGG AGCCGAGAAGATCATCCTGCTCGGCGACTATGTCGGCTACGGCGCCGACCCGGACTGGACCGTCGGCACGGTGGCCGATC TCGTCGATGCCGGCGCGGTCGCCATTCTCGGCAATCACGACAGCGCGATCGGCAATCCGAAGGTGCAGATGAATGCCGAA GCGGAGGCGGCGATCGAATGGACGCGCGGCCAGCTCGATGTCGCGCAGCGTCAGTTTCTCGCCGGGCTGCCGATGAAGCA CGACGAGGCCAATTTGCTGTTCGTCCACTCGGAAGCGACCCGACCGGAGGGCTGGATCTACGTGACCGACACCGCGGTCG CCTCGCGCAGCATGCAGTCGGTCGCGGCGCATGTGACGTTCTGCGGCCACGTCCACAAGCCGGCGCTGTATTCACTGTCG GTCACCGGCAAGATGACCACCTTCGTGCCGACGGCCGATGTACCGGTGCACCTGCTGCCCGGCCGGCAATGGCTCGCGGT GCTGGGTTCGGTCGGGCAGCCGCGCGACGGCAATCCGGCCGCCGCCTACGGCTTGTACGATACGGTCAAACACCAGCTGA CCTATTGCCGGGTGCCCTACGATGTCGACGGCGCCGCGCGCCGGATTCGCGACAATGGCCTGCCGATCTGGCTCGCCGAT CGACTGCTGGCGGGGCGGTGA
Upstream 100 bases:
>100_bases GAAAAGGCCGTCGGCACAGCGGTTTCATGCCTGCGGGCGTGAGGCGCCAACAATCGACATCCGCTCGCAAAGAGAGGATC GCGAACATGGGAGGTGGGAC
Downstream 100 bases:
>100_bases CCGGCATGGACCAACCCTCGTTCGAGCCTGGCTCGACGGTCGACGGCTACCTGATCGAAGGCCCGCTGCATCGCGGCGGC ATGGCGGAGTTGTTCGCGGT
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MLLALFADIHANRQAFTACLANAREQGAEKIILLGDYVGYGADPDWTVGTVADLVDAGAVAILGNHDSAIGNPKVQMNAE AEAAIEWTRGQLDVAQRQFLAGLPMKHDEANLLFVHSEATRPEGWIYVTDTAVASRSMQSVAAHVTFCGHVHKPALYSLS VTGKMTTFVPTADVPVHLLPGRQWLAVLGSVGQPRDGNPAAAYGLYDTVKHQLTYCRVPYDVDGAARRIRDNGLPIWLAD RLLAGR
Sequences:
>Translated_246_residues MLLALFADIHANRQAFTACLANAREQGAEKIILLGDYVGYGADPDWTVGTVADLVDAGAVAILGNHDSAIGNPKVQMNAE AEAAIEWTRGQLDVAQRQFLAGLPMKHDEANLLFVHSEATRPEGWIYVTDTAVASRSMQSVAAHVTFCGHVHKPALYSLS VTGKMTTFVPTADVPVHLLPGRQWLAVLGSVGQPRDGNPAAAYGLYDTVKHQLTYCRVPYDVDGAARRIRDNGLPIWLAD RLLAGR >Mature_246_residues MLLALFADIHANRQAFTACLANAREQGAEKIILLGDYVGYGADPDWTVGTVADLVDAGAVAILGNHDSAIGNPKVQMNAE AEAAIEWTRGQLDVAQRQFLAGLPMKHDEANLLFVHSEATRPEGWIYVTDTAVASRSMQSVAAHVTFCGHVHKPALYSLS VTGKMTTFVPTADVPVHLLPGRQWLAVLGSVGQPRDGNPAAAYGLYDTVKHQLTYCRVPYDVDGAARRIRDNGLPIWLAD RLLAGR
Specific function: Unknown
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR011152 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 26539; Mature: 26539
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLALFADIHANRQAFTACLANAREQGAEKIILLGDYVGYGADPDWTVGTVADLVDAGAV CEEEEEEHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEE AILGNHDSAIGNPKVQMNAEAEAAIEWTRGQLDVAQRQFLAGLPMKHDEANLLFVHSEAT EEECCCCCCCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCC RPEGWIYVTDTAVASRSMQSVAAHVTFCGHVHKPALYSLSVTGKMTTFVPTADVPVHLLP CCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEECCCCCEEEEC GRQWLAVLGSVGQPRDGNPAAAYGLYDTVKHQLTYCRVPYDVDGAARRIRDNGLPIWLAD CHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHCEEEEECCCCCCHHHHHHHCCCCEEEEEC RLLAGR HHHCCC >Mature Secondary Structure MLLALFADIHANRQAFTACLANAREQGAEKIILLGDYVGYGADPDWTVGTVADLVDAGAV CEEEEEEHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEE AILGNHDSAIGNPKVQMNAEAEAAIEWTRGQLDVAQRQFLAGLPMKHDEANLLFVHSEAT EEECCCCCCCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCC RPEGWIYVTDTAVASRSMQSVAAHVTFCGHVHKPALYSLSVTGKMTTFVPTADVPVHLLP CCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEECCCCCEEEEC GRQWLAVLGSVGQPRDGNPAAAYGLYDTVKHQLTYCRVPYDVDGAARRIRDNGLPIWLAD CHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHCEEEEECCCCCCHHHHHHHCCCCEEEEEC RLLAGR HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]