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The map label for this gene is yciF [H]

Identifier: 86750940

GI number: 86750940

Start: 4374742

End: 4375248

Strand: Reverse

Name: yciF [H]

Synonym: RPB_3832

Alternate gene names: 86750940

Gene position: 4375248-4374742 (Counterclockwise)

Preceding gene: 86750945

Following gene: 86750937

Centisome position: 82.06

GC content: 62.13

Gene sequence:

>507_bases
ATGGGACTGTTCACCAAAGACATCAAGACCATGGATGACCTGTTCGTGCACCAATTGCAGGACATCTATTACGCCGAGAA
ACAACTCGTGAAGGCGCTGCCGAAGATGGCCGACAAGGCCACAGATCCGCTGCTGAAGCAGGGTTTCATGACCCATCTCG
AAGAGACCAAGGGTCATGTGAAGCGGCTCGAACAGGTGTTCGAGATGCACGGCGCGCCGGTCAAGGCGGTCGACTGCCCG
GCGATCGACGGCATCATCGAAGAAGCCGACGAGACCGCCGGTGAGGTCGCCGACAAGACCGTGCTGGACGCCGCGCTGAT
CAACGCCGCGCAGGCCGCCGAGCACTATGAGATCGTCCGATACGGCAGCCTGGTGGCATGGGCGAAGCGGCTCGGCCGCA
ACGACTGCGCGGCCGTCCTGCAGAAGACGCTGGACGAGGAAAAGGCCACCGACAAGAAGCTCACCACGCTGGCCGAGAGC
TCGATCAACATCCGCGCCGCGGGGTGA

Upstream 100 bases:

>100_bases
CGTGCGGCATGCGGAACGGGTGTCCGGCGGGCTGGTTAATCCGGTCTCCAGGACGAGGCGGACTGCGAAACCGTCCGTGC
CAACCCCGAGAGGAACCGCG

Downstream 100 bases:

>100_bases
TCGCGCCTCGCCGTGGTACAAAGTAAGCTGAGGCTAAACGCCGCGCGAAAAAAACGCGCGGCGTTTTTTGTTTTGCGGTG
CGAGAGTTGAGCTCGTGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MGLFTKDIKTMDDLFVHQLQDIYYAEKQLVKALPKMADKATDPLLKQGFMTHLEETKGHVKRLEQVFEMHGAPVKAVDCP
AIDGIIEEADETAGEVADKTVLDAALINAAQAAEHYEIVRYGSLVAWAKRLGRNDCAAVLQKTLDEEKATDKKLTTLAES
SINIRAAG

Sequences:

>Translated_168_residues
MGLFTKDIKTMDDLFVHQLQDIYYAEKQLVKALPKMADKATDPLLKQGFMTHLEETKGHVKRLEQVFEMHGAPVKAVDCP
AIDGIIEEADETAGEVADKTVLDAALINAAQAAEHYEIVRYGSLVAWAKRLGRNDCAAVLQKTLDEEKATDKKLTTLAES
SINIRAAG
>Mature_167_residues
GLFTKDIKTMDDLFVHQLQDIYYAEKQLVKALPKMADKATDPLLKQGFMTHLEETKGHVKRLEQVFEMHGAPVKAVDCPA
IDGIIEEADETAGEVADKTVLDAALINAAQAAEHYEIVRYGSLVAWAKRLGRNDCAAVLQKTLDEEKATDKKLTTLAESS
INIRAAG

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=161, Percent_Identity=47.2049689440994, Blast_Score=147, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 18497; Mature: 18366

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFTKDIKTMDDLFVHQLQDIYYAEKQLVKALPKMADKATDPLLKQGFMTHLEETKGHV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
KRLEQVFEMHGAPVKAVDCPAIDGIIEEADETAGEVADKTVLDAALINAAQAAEHYEIVR
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGSLVAWAKRLGRNDCAAVLQKTLDEEKATDKKLTTLAESSINIRAAG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
GLFTKDIKTMDDLFVHQLQDIYYAEKQLVKALPKMADKATDPLLKQGFMTHLEETKGHV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
KRLEQVFEMHGAPVKAVDCPAIDGIIEEADETAGEVADKTVLDAALINAAQAAEHYEIVR
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGSLVAWAKRLGRNDCAAVLQKTLDEEKATDKKLTTLAESSINIRAAG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]