Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86750580

Identifier: 86750580

GI number: 86750580

Start: 3974975

End: 3975742

Strand: Direct

Name: 86750580

Synonym: RPB_3469

Alternate gene names: NA

Gene position: 3974975-3975742 (Clockwise)

Preceding gene: 86750556

Following gene: 86750581

Centisome position: 74.55

GC content: 74.48

Gene sequence:

>768_bases
ATGATCCGCCGCTCGACACTTGCCGTTCTGATCGCCGCCGCGCTCGCCGCGCCCGCATCCGCCATGGTCGGCGGCGCGCG
CGAGAGCCGCGACGGCATCGGCCGCGCGCTCGTCACCATCGTCGGCTCGCGCGGCAATTTCTGTTCCGGCGCGCTGATCG
CGCCGGATCTGGTGCTGAGCGCCGCGCATTGCGTCGCGCCCGGCGCGGACTACAAGATCGTGCAGCGCGACGCGCAGGGG
CAGCCGCAGCTCCGCGACATCCGCCGCCTCGCGGCGCATCCGCAATTCGACCTGCGCGCGATCCAGGCCAACCGCGCCAC
CGCCGACGTCGCGCTGCTGCAGCTCGCCGCGCCGCTGCCCGGCAAGACGCCGCTGCCGTTCGGCGCGCCGAACGATCCGC
TCGCCGCGGGGCAGAGCTTCACCGTCGCCGGCATCGGCGTGGCGCAGCGCGGCGACGGCAAGAGCGGCGGCGTAGCGCGC
GCAGCCGAGCTGATCGCCACCGGCCGGCCCGGCCGGCTGCAGATCCGCCTGGTCGATCCGGCAACGAACAACAGCCGCGA
AGGCCAGGGCGCCTGCACCGGCGATTCCGGCGGGCCGGCCTTGCAGCAGCAGGACGGCCGCGCCGTGGTGATCGGCGTGG
TGTCGTGGTCGACCGGCGCCAACAACGCCGCCGGCTGCGGCGGCCTCACCGGCGTAACGCCGCTGACGCTGTATCGCGAC
TGGATCGAGCGCACCGCAACGAGCTGGGGCGCGACGCTGGCGAAGTAG

Upstream 100 bases:

>100_bases
CGGCTCCACCACCGGCCCCGCCAGCAAAATCGCCGACATTGCTCATCCCTCCGAAATGTTCAGGTTGACAGCGCGGCGGC
GGCGAGGCTCAAAGCCCGCC

Downstream 100 bases:

>100_bases
GCCGGCGCGAAGCCGCAACATCTGCCGCCGTCATCCTGAGGCGCAACATCTGCCGCCGTCATCCTGAGGCGCCGCCGCGC
AGCGGCGGCCTCGAAGGATG

Product: peptidase S1 and S6, chymotrypsin/Hap

Products: NA

Alternate protein names: Serine Protease; Trypsin; Trypsin Domain Lipoprotein; Peptidase; Phosphotrypsin; Secreted Trypsin-Like Serine Protease

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MIRRSTLAVLIAAALAAPASAMVGGARESRDGIGRALVTIVGSRGNFCSGALIAPDLVLSAAHCVAPGADYKIVQRDAQG
QPQLRDIRRLAAHPQFDLRAIQANRATADVALLQLAAPLPGKTPLPFGAPNDPLAAGQSFTVAGIGVAQRGDGKSGGVAR
AAELIATGRPGRLQIRLVDPATNNSREGQGACTGDSGGPALQQQDGRAVVIGVVSWSTGANNAAGCGGLTGVTPLTLYRD
WIERTATSWGATLAK

Sequences:

>Translated_255_residues
MIRRSTLAVLIAAALAAPASAMVGGARESRDGIGRALVTIVGSRGNFCSGALIAPDLVLSAAHCVAPGADYKIVQRDAQG
QPQLRDIRRLAAHPQFDLRAIQANRATADVALLQLAAPLPGKTPLPFGAPNDPLAAGQSFTVAGIGVAQRGDGKSGGVAR
AAELIATGRPGRLQIRLVDPATNNSREGQGACTGDSGGPALQQQDGRAVVIGVVSWSTGANNAAGCGGLTGVTPLTLYRD
WIERTATSWGATLAK
>Mature_255_residues
MIRRSTLAVLIAAALAAPASAMVGGARESRDGIGRALVTIVGSRGNFCSGALIAPDLVLSAAHCVAPGADYKIVQRDAQG
QPQLRDIRRLAAHPQFDLRAIQANRATADVALLQLAAPLPGKTPLPFGAPNDPLAAGQSFTVAGIGVAQRGDGKSGGVAR
AAELIATGRPGRLQIRLVDPATNNSREGQGACTGDSGGPALQQQDGRAVVIGVVSWSTGANNAAGCGGLTGVTPLTLYRD
WIERTATSWGATLAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4758502, Length=231, Percent_Identity=30.3030303030303, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI295054188, Length=231, Percent_Identity=30.3030303030303, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI4503137, Length=188, Percent_Identity=29.2553191489362, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI118498341, Length=214, Percent_Identity=27.1028037383178, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI118498350, Length=186, Percent_Identity=28.494623655914, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI221474989, Length=236, Percent_Identity=27.1186440677966, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581698, Length=214, Percent_Identity=30.3738317757009, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI221330452, Length=231, Percent_Identity=29.4372294372294, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI281360419, Length=225, Percent_Identity=31.1111111111111, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI281360423, Length=224, Percent_Identity=31.25, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25898; Mature: 25898

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS00134 TRYPSIN_HIS ; PS50240 TRYPSIN_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRSTLAVLIAAALAAPASAMVGGARESRDGIGRALVTIVGSRGNFCSGALIAPDLVLS
CCCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHH
AAHCVAPGADYKIVQRDAQGQPQLRDIRRLAAHPQFDLRAIQANRATADVALLQLAAPLP
HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCC
GKTPLPFGAPNDPLAAGQSFTVAGIGVAQRGDGKSGGVARAAELIATGRPGRLQIRLVDP
CCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECC
ATNNSREGQGACTGDSGGPALQQQDGRAVVIGVVSWSTGANNAAGCGGLTGVTPLTLYRD
CCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
WIERTATSWGATLAK
HHHHHHHHCCHHCCC
>Mature Secondary Structure
MIRRSTLAVLIAAALAAPASAMVGGARESRDGIGRALVTIVGSRGNFCSGALIAPDLVLS
CCCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHH
AAHCVAPGADYKIVQRDAQGQPQLRDIRRLAAHPQFDLRAIQANRATADVALLQLAAPLP
HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCC
GKTPLPFGAPNDPLAAGQSFTVAGIGVAQRGDGKSGGVARAAELIATGRPGRLQIRLVDP
CCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECC
ATNNSREGQGACTGDSGGPALQQQDGRAVVIGVVSWSTGANNAAGCGGLTGVTPLTLYRD
CCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
WIERTATSWGATLAK
HHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA