| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750580
Identifier: 86750580
GI number: 86750580
Start: 3974975
End: 3975742
Strand: Direct
Name: 86750580
Synonym: RPB_3469
Alternate gene names: NA
Gene position: 3974975-3975742 (Clockwise)
Preceding gene: 86750556
Following gene: 86750581
Centisome position: 74.55
GC content: 74.48
Gene sequence:
>768_bases ATGATCCGCCGCTCGACACTTGCCGTTCTGATCGCCGCCGCGCTCGCCGCGCCCGCATCCGCCATGGTCGGCGGCGCGCG CGAGAGCCGCGACGGCATCGGCCGCGCGCTCGTCACCATCGTCGGCTCGCGCGGCAATTTCTGTTCCGGCGCGCTGATCG CGCCGGATCTGGTGCTGAGCGCCGCGCATTGCGTCGCGCCCGGCGCGGACTACAAGATCGTGCAGCGCGACGCGCAGGGG CAGCCGCAGCTCCGCGACATCCGCCGCCTCGCGGCGCATCCGCAATTCGACCTGCGCGCGATCCAGGCCAACCGCGCCAC CGCCGACGTCGCGCTGCTGCAGCTCGCCGCGCCGCTGCCCGGCAAGACGCCGCTGCCGTTCGGCGCGCCGAACGATCCGC TCGCCGCGGGGCAGAGCTTCACCGTCGCCGGCATCGGCGTGGCGCAGCGCGGCGACGGCAAGAGCGGCGGCGTAGCGCGC GCAGCCGAGCTGATCGCCACCGGCCGGCCCGGCCGGCTGCAGATCCGCCTGGTCGATCCGGCAACGAACAACAGCCGCGA AGGCCAGGGCGCCTGCACCGGCGATTCCGGCGGGCCGGCCTTGCAGCAGCAGGACGGCCGCGCCGTGGTGATCGGCGTGG TGTCGTGGTCGACCGGCGCCAACAACGCCGCCGGCTGCGGCGGCCTCACCGGCGTAACGCCGCTGACGCTGTATCGCGAC TGGATCGAGCGCACCGCAACGAGCTGGGGCGCGACGCTGGCGAAGTAG
Upstream 100 bases:
>100_bases CGGCTCCACCACCGGCCCCGCCAGCAAAATCGCCGACATTGCTCATCCCTCCGAAATGTTCAGGTTGACAGCGCGGCGGC GGCGAGGCTCAAAGCCCGCC
Downstream 100 bases:
>100_bases GCCGGCGCGAAGCCGCAACATCTGCCGCCGTCATCCTGAGGCGCAACATCTGCCGCCGTCATCCTGAGGCGCCGCCGCGC AGCGGCGGCCTCGAAGGATG
Product: peptidase S1 and S6, chymotrypsin/Hap
Products: NA
Alternate protein names: Serine Protease; Trypsin; Trypsin Domain Lipoprotein; Peptidase; Phosphotrypsin; Secreted Trypsin-Like Serine Protease
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MIRRSTLAVLIAAALAAPASAMVGGARESRDGIGRALVTIVGSRGNFCSGALIAPDLVLSAAHCVAPGADYKIVQRDAQG QPQLRDIRRLAAHPQFDLRAIQANRATADVALLQLAAPLPGKTPLPFGAPNDPLAAGQSFTVAGIGVAQRGDGKSGGVAR AAELIATGRPGRLQIRLVDPATNNSREGQGACTGDSGGPALQQQDGRAVVIGVVSWSTGANNAAGCGGLTGVTPLTLYRD WIERTATSWGATLAK
Sequences:
>Translated_255_residues MIRRSTLAVLIAAALAAPASAMVGGARESRDGIGRALVTIVGSRGNFCSGALIAPDLVLSAAHCVAPGADYKIVQRDAQG QPQLRDIRRLAAHPQFDLRAIQANRATADVALLQLAAPLPGKTPLPFGAPNDPLAAGQSFTVAGIGVAQRGDGKSGGVAR AAELIATGRPGRLQIRLVDPATNNSREGQGACTGDSGGPALQQQDGRAVVIGVVSWSTGANNAAGCGGLTGVTPLTLYRD WIERTATSWGATLAK >Mature_255_residues MIRRSTLAVLIAAALAAPASAMVGGARESRDGIGRALVTIVGSRGNFCSGALIAPDLVLSAAHCVAPGADYKIVQRDAQG QPQLRDIRRLAAHPQFDLRAIQANRATADVALLQLAAPLPGKTPLPFGAPNDPLAAGQSFTVAGIGVAQRGDGKSGGVAR AAELIATGRPGRLQIRLVDPATNNSREGQGACTGDSGGPALQQQDGRAVVIGVVSWSTGANNAAGCGGLTGVTPLTLYRD WIERTATSWGATLAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4758502, Length=231, Percent_Identity=30.3030303030303, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI295054188, Length=231, Percent_Identity=30.3030303030303, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI4503137, Length=188, Percent_Identity=29.2553191489362, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI118498341, Length=214, Percent_Identity=27.1028037383178, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI118498350, Length=186, Percent_Identity=28.494623655914, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI221474989, Length=236, Percent_Identity=27.1186440677966, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24581698, Length=214, Percent_Identity=30.3738317757009, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI221330452, Length=231, Percent_Identity=29.4372294372294, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI281360419, Length=225, Percent_Identity=31.1111111111111, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI281360423, Length=224, Percent_Identity=31.25, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25898; Mature: 25898
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: PS00134 TRYPSIN_HIS ; PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRSTLAVLIAAALAAPASAMVGGARESRDGIGRALVTIVGSRGNFCSGALIAPDLVLS CCCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHH AAHCVAPGADYKIVQRDAQGQPQLRDIRRLAAHPQFDLRAIQANRATADVALLQLAAPLP HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCC GKTPLPFGAPNDPLAAGQSFTVAGIGVAQRGDGKSGGVARAAELIATGRPGRLQIRLVDP CCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECC ATNNSREGQGACTGDSGGPALQQQDGRAVVIGVVSWSTGANNAAGCGGLTGVTPLTLYRD CCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHH WIERTATSWGATLAK HHHHHHHHCCHHCCC >Mature Secondary Structure MIRRSTLAVLIAAALAAPASAMVGGARESRDGIGRALVTIVGSRGNFCSGALIAPDLVLS CCCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHH AAHCVAPGADYKIVQRDAQGQPQLRDIRRLAAHPQFDLRAIQANRATADVALLQLAAPLP HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCC GKTPLPFGAPNDPLAAGQSFTVAGIGVAQRGDGKSGGVARAAELIATGRPGRLQIRLVDP CCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECC ATNNSREGQGACTGDSGGPALQQQDGRAVVIGVVSWSTGANNAAGCGGLTGVTPLTLYRD CCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHH WIERTATSWGATLAK HHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA