Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86750556

Identifier: 86750556

GI number: 86750556

Start: 3951569

End: 3952057

Strand: Direct

Name: 86750556

Synonym: RPB_3445

Alternate gene names: NA

Gene position: 3951569-3952057 (Clockwise)

Preceding gene: 86750555

Following gene: 86750580

Centisome position: 74.12

GC content: 64.62

Gene sequence:

>489_bases
ATGGAAACGGTCGAAGAGTTTCTGGCGCACTCGATCCGCCTCGAACAGGAAGCGGCTCTGCGCTTCGGTCAGCTCGCAGA
CGCGATGGACAGCTGCGGCAACAAGGAAGTCTCCAAGCTGTTCCGGCAGCTCGCCGACTACTCGCGCATGCACCAGGCCG
ATGCCCAGGCCCGTGCCGGCTTCCGCGAGATTCCCGAGATGGAGACCGTCGATTTCAAATGGCCCGGCGACGAAAGCCCG
GAGACCGCGGCGATCTGGGGCACCGACCCGTTCATCGGCCGCGACCTGGCGCTGGAAATCGCGCTGGAAGCCGAGACCGG
CGCCTTTGATTGGTACAAGAACGTGCTCGACACCACCGACAATCCGGAGATCCGGGCGCTGGCGAAAGAGTTCGTCGCCG
AGGAAAGCGGCCACGTCGCCGAGCTGCACCGCTGGATCGCCCTGCACAAGGCCGGCAAACCGCTGCCGATGGAGATCACG
CCGTTCTGA

Upstream 100 bases:

>100_bases
TCAAGCACGCCAAGACGGCTGAAAACGCCTGACGACGACATCCGACATCGGAGACGGCTGCCGTCGACCCGGCGGCAGCC
GAACAGCGAAGGATATTCAG

Downstream 100 bases:

>100_bases
GGGGGCATCCCTCGACGACGCCTTTCGGCTGGTCCGACTACGACGCCGGGCCGCTCGCGCTGCTGGTCTCGCGCGCGGCC
GCTTGCGTCTGCGCAATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Ferredoxin; Rubrerythrin Subfamily Protein; Ferritin-Like Protein

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
METVEEFLAHSIRLEQEAALRFGQLADAMDSCGNKEVSKLFRQLADYSRMHQADAQARAGFREIPEMETVDFKWPGDESP
ETAAIWGTDPFIGRDLALEIALEAETGAFDWYKNVLDTTDNPEIRALAKEFVAEESGHVAELHRWIALHKAGKPLPMEIT
PF

Sequences:

>Translated_162_residues
METVEEFLAHSIRLEQEAALRFGQLADAMDSCGNKEVSKLFRQLADYSRMHQADAQARAGFREIPEMETVDFKWPGDESP
ETAAIWGTDPFIGRDLALEIALEAETGAFDWYKNVLDTTDNPEIRALAKEFVAEESGHVAELHRWIALHKAGKPLPMEIT
PF
>Mature_162_residues
METVEEFLAHSIRLEQEAALRFGQLADAMDSCGNKEVSKLFRQLADYSRMHQADAQARAGFREIPEMETVDFKWPGDESP
ETAAIWGTDPFIGRDLALEIALEAETGAFDWYKNVLDTTDNPEIRALAKEFVAEESGHVAELHRWIALHKAGKPLPMEIT
PF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18263; Mature: 18263

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVEEFLAHSIRLEQEAALRFGQLADAMDSCGNKEVSKLFRQLADYSRMHQADAQARAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
FREIPEMETVDFKWPGDESPETAAIWGTDPFIGRDLALEIALEAETGAFDWYKNVLDTTD
HHHCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCC
NPEIRALAKEFVAEESGHVAELHRWIALHKAGKPLPMEITPF
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEECCCC
>Mature Secondary Structure
METVEEFLAHSIRLEQEAALRFGQLADAMDSCGNKEVSKLFRQLADYSRMHQADAQARAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
FREIPEMETVDFKWPGDESPETAAIWGTDPFIGRDLALEIALEAETGAFDWYKNVLDTTD
HHHCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCC
NPEIRALAKEFVAEESGHVAELHRWIALHKAGKPLPMEITPF
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA