Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86750541

Identifier: 86750541

GI number: 86750541

Start: 3927961

End: 3929493

Strand: Direct

Name: 86750541

Synonym: RPB_3430

Alternate gene names: NA

Gene position: 3927961-3929493 (Clockwise)

Preceding gene: 86750540

Following gene: 86750542

Centisome position: 73.67

GC content: 65.49

Gene sequence:

>1533_bases
ATGGAAGAGCTCACCAACCTGTTCCACGGCTTCGCCGTCGCGCTGATGCCGTTCAACATCCTGGTGATGGTGATCGGCAT
CGTACTCGGCGTCATTATTGGCGTGCTGCCGGGCCTCGGCGGCGCCAACGGCGTCGCGATCCTGCTGCCGCTGACCTTCA
GCATGCCGCCGACCTCGGCGATCATCATGCTGTCCTGCATCTATTGGGGCGCGCTGTTCGGCGGGGCGATCACCTCGATC
CTGTTCAACATCCCCGGCGAACCATGGTCGGTCGCGACCACCTTCGACGGCTATCCGATGGCGCAGCAGGGCAAGGCCGG
CGAAGCGCTGACCGCCGCCTTCACCTCGTCCTTCGTCGGTGCGCTGTTCGCGATCATCATGATCACGCTGGTCGCGCCGC
TGGTGGCGCGGTTCGCGCTGGAGTTCGGCCCGGCCGAAAAATTCGCGGTGTACTTCCTCGCCTTCTGCAGTTTCATCGGG
CTGTCGAAGGAACCAGCATTCAAGACGGTCGCGGCGATGATGCTCGGCTTCGCGCTGGCCGCGGTGGGGCTGGATTCGAT
GACCGGCCAGCTCCGGCTGACCTTCGGCTTCACCGAAATGCTGAACGGTTTCGACTTCCTGATCGCGGTGATCGGCCTGT
TCGGCATCGGCGAGATCCTGCTGACGATGGAGGACGGACTGAGCTTCCGCGGCAGCAAGGCCAAGATCAATCTGCGCGTC
GTGCTGCAGACCTGGAAGGAACTGCCGCGCTACTGGATGACGTCGCTACGCTCCAGCGTGATCGGCTGCTGGATGGGCAT
CACGCCGGCCGGCGCCACGCCGGCCTCGTTCATGAGCTACGGCATCGCCAAGCGGGTGTCGAAGAACGGCAAGAATTTCG
GCCACGGCGAGATCGAAGGCGTGATCGCGCCGGAGACCGCGGCGCACGCCGCCGGCACCGCGGCGCTGCTGCCGATGCTG
TCGCTCGGCGTGCCGGGATCGCCGACCGCAGCCGTGCTGCTCGGCGGCCTGCTGATCTGGGGTCTGCAGCCCGGCCCGAT
GCTGTTCGTCGAGCAGAAGGAATTCGTCTGGGGCCTGATCGCCTCGATGTATCTCGGCAACATCGTCGGCCTCTTGATCG
TGCTGACCTGCGTGCCGTTCTTCGCCGCGATCCTGCGGATTCCGTTCAGCATCGTCGCGCCGCTGATCCTGGTGCTGTGC
GCGATCGGCGCCTATTCGGTGCACAACTCGACCTTCGACGTGATGCTGATGCTGGTGTTCGGCGTGATCGGCTATCTGCT
GAAGAAGTGCAATTATCCGCTGGCGCCGCTGGTGCTGGCGATCGTGCTCGGCGACAAGGCGGAGGAAGCGTTCCGGCAGT
CGCTGCTGGCCTCGCAGGGTGCGCTCGGCGTGTTTTTCTCCAACGGGCTGGTCGGCACGATCATGGCGCTCGGGCTGATC
GCGCTGTTCTGGTCGCCGCTCAACGCCGGCTATGCCCGACTGCGATCCGCGGCGACCGGGCGGCCGCGGCCGGCCGGCCC
CGGTTACGAATAG

Upstream 100 bases:

>100_bases
TTTGCTCGGCCTCTAGGTTTTCGCGCCCCGCTTCTCTGCGTGGCCCGCGCTGTTGCTTTTGAAGACGATTTGACGCCCTC
GTAGGTCAGGACCCTCCCGG

Downstream 100 bases:

>100_bases
CGCCATGAGCATCGCATGCTTGAACGAGGCGCCGATCTGACCGATAAACCGCCGCACCGCGTCATTCGCGGCTGCAACTT
CCACGATCGCCAGGCGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFZ2 [H]

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MEELTNLFHGFAVALMPFNILVMVIGIVLGVIIGVLPGLGGANGVAILLPLTFSMPPTSAIIMLSCIYWGALFGGAITSI
LFNIPGEPWSVATTFDGYPMAQQGKAGEALTAAFTSSFVGALFAIIMITLVAPLVARFALEFGPAEKFAVYFLAFCSFIG
LSKEPAFKTVAAMMLGFALAAVGLDSMTGQLRLTFGFTEMLNGFDFLIAVIGLFGIGEILLTMEDGLSFRGSKAKINLRV
VLQTWKELPRYWMTSLRSSVIGCWMGITPAGATPASFMSYGIAKRVSKNGKNFGHGEIEGVIAPETAAHAAGTAALLPML
SLGVPGSPTAAVLLGGLLIWGLQPGPMLFVEQKEFVWGLIASMYLGNIVGLLIVLTCVPFFAAILRIPFSIVAPLILVLC
AIGAYSVHNSTFDVMLMLVFGVIGYLLKKCNYPLAPLVLAIVLGDKAEEAFRQSLLASQGALGVFFSNGLVGTIMALGLI
ALFWSPLNAGYARLRSAATGRPRPAGPGYE

Sequences:

>Translated_510_residues
MEELTNLFHGFAVALMPFNILVMVIGIVLGVIIGVLPGLGGANGVAILLPLTFSMPPTSAIIMLSCIYWGALFGGAITSI
LFNIPGEPWSVATTFDGYPMAQQGKAGEALTAAFTSSFVGALFAIIMITLVAPLVARFALEFGPAEKFAVYFLAFCSFIG
LSKEPAFKTVAAMMLGFALAAVGLDSMTGQLRLTFGFTEMLNGFDFLIAVIGLFGIGEILLTMEDGLSFRGSKAKINLRV
VLQTWKELPRYWMTSLRSSVIGCWMGITPAGATPASFMSYGIAKRVSKNGKNFGHGEIEGVIAPETAAHAAGTAALLPML
SLGVPGSPTAAVLLGGLLIWGLQPGPMLFVEQKEFVWGLIASMYLGNIVGLLIVLTCVPFFAAILRIPFSIVAPLILVLC
AIGAYSVHNSTFDVMLMLVFGVIGYLLKKCNYPLAPLVLAIVLGDKAEEAFRQSLLASQGALGVFFSNGLVGTIMALGLI
ALFWSPLNAGYARLRSAATGRPRPAGPGYE
>Mature_510_residues
MEELTNLFHGFAVALMPFNILVMVIGIVLGVIIGVLPGLGGANGVAILLPLTFSMPPTSAIIMLSCIYWGALFGGAITSI
LFNIPGEPWSVATTFDGYPMAQQGKAGEALTAAFTSSFVGALFAIIMITLVAPLVARFALEFGPAEKFAVYFLAFCSFIG
LSKEPAFKTVAAMMLGFALAAVGLDSMTGQLRLTFGFTEMLNGFDFLIAVIGLFGIGEILLTMEDGLSFRGSKAKINLRV
VLQTWKELPRYWMTSLRSSVIGCWMGITPAGATPASFMSYGIAKRVSKNGKNFGHGEIEGVIAPETAAHAAGTAALLPML
SLGVPGSPTAAVLLGGLLIWGLQPGPMLFVEQKEFVWGLIASMYLGNIVGLLIVLTCVPFFAAILRIPFSIVAPLILVLC
AIGAYSVHNSTFDVMLMLVFGVIGYLLKKCNYPLAPLVLAIVLGDKAEEAFRQSLLASQGALGVFFSNGLVGTIMALGLI
ALFWSPLNAGYARLRSAATGRPRPAGPGYE

Specific function: Unknown

COG id: COG3333

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002823 [H]

Pfam domain/function: PF01970 DUF112 [H]

EC number: NA

Molecular weight: Translated: 53835; Mature: 53835

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELTNLFHGFAVALMPFNILVMVIGIVLGVIIGVLPGLGGANGVAILLPLTFSMPPTSA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHH
IIMLSCIYWGALFGGAITSILFNIPGEPWSVATTFDGYPMAQQGKAGEALTAAFTSSFVG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
ALFAIIMITLVAPLVARFALEFGPAEKFAVYFLAFCSFIGLSKEPAFKTVAAMMLGFALA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AVGLDSMTGQLRLTFGFTEMLNGFDFLIAVIGLFGIGEILLTMEDGLSFRGSKAKINLRV
HHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHH
VLQTWKELPRYWMTSLRSSVIGCWMGITPAGATPASFMSYGIAKRVSKNGKNFGHGEIEG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCE
VIAPETAAHAAGTAALLPMLSLGVPGSPTAAVLLGGLLIWGLQPGPMLFVEQKEFVWGLI
EECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHH
ASMYLGNIVGLLIVLTCVPFFAAILRIPFSIVAPLILVLCAIGAYSVHNSTFDVMLMLVF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GVIGYLLKKCNYPLAPLVLAIVLGDKAEEAFRQSLLASQGALGVFFSNGLVGTIMALGLI
HHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEHCCCCHHHHHHHHHHH
ALFWSPLNAGYARLRSAATGRPRPAGPGYE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MEELTNLFHGFAVALMPFNILVMVIGIVLGVIIGVLPGLGGANGVAILLPLTFSMPPTSA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHH
IIMLSCIYWGALFGGAITSILFNIPGEPWSVATTFDGYPMAQQGKAGEALTAAFTSSFVG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
ALFAIIMITLVAPLVARFALEFGPAEKFAVYFLAFCSFIGLSKEPAFKTVAAMMLGFALA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AVGLDSMTGQLRLTFGFTEMLNGFDFLIAVIGLFGIGEILLTMEDGLSFRGSKAKINLRV
HHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHH
VLQTWKELPRYWMTSLRSSVIGCWMGITPAGATPASFMSYGIAKRVSKNGKNFGHGEIEG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCE
VIAPETAAHAAGTAALLPMLSLGVPGSPTAAVLLGGLLIWGLQPGPMLFVEQKEFVWGLI
EECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHH
ASMYLGNIVGLLIVLTCVPFFAAILRIPFSIVAPLILVLCAIGAYSVHNSTFDVMLMLVF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
GVIGYLLKKCNYPLAPLVLAIVLGDKAEEAFRQSLLASQGALGVFFSNGLVGTIMALGLI
HHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEHCCCCHHHHHHHHHHH
ALFWSPLNAGYARLRSAATGRPRPAGPGYE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]