Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86750541
Identifier: 86750541
GI number: 86750541
Start: 3927961
End: 3929493
Strand: Direct
Name: 86750541
Synonym: RPB_3430
Alternate gene names: NA
Gene position: 3927961-3929493 (Clockwise)
Preceding gene: 86750540
Following gene: 86750542
Centisome position: 73.67
GC content: 65.49
Gene sequence:
>1533_bases ATGGAAGAGCTCACCAACCTGTTCCACGGCTTCGCCGTCGCGCTGATGCCGTTCAACATCCTGGTGATGGTGATCGGCAT CGTACTCGGCGTCATTATTGGCGTGCTGCCGGGCCTCGGCGGCGCCAACGGCGTCGCGATCCTGCTGCCGCTGACCTTCA GCATGCCGCCGACCTCGGCGATCATCATGCTGTCCTGCATCTATTGGGGCGCGCTGTTCGGCGGGGCGATCACCTCGATC CTGTTCAACATCCCCGGCGAACCATGGTCGGTCGCGACCACCTTCGACGGCTATCCGATGGCGCAGCAGGGCAAGGCCGG CGAAGCGCTGACCGCCGCCTTCACCTCGTCCTTCGTCGGTGCGCTGTTCGCGATCATCATGATCACGCTGGTCGCGCCGC TGGTGGCGCGGTTCGCGCTGGAGTTCGGCCCGGCCGAAAAATTCGCGGTGTACTTCCTCGCCTTCTGCAGTTTCATCGGG CTGTCGAAGGAACCAGCATTCAAGACGGTCGCGGCGATGATGCTCGGCTTCGCGCTGGCCGCGGTGGGGCTGGATTCGAT GACCGGCCAGCTCCGGCTGACCTTCGGCTTCACCGAAATGCTGAACGGTTTCGACTTCCTGATCGCGGTGATCGGCCTGT TCGGCATCGGCGAGATCCTGCTGACGATGGAGGACGGACTGAGCTTCCGCGGCAGCAAGGCCAAGATCAATCTGCGCGTC GTGCTGCAGACCTGGAAGGAACTGCCGCGCTACTGGATGACGTCGCTACGCTCCAGCGTGATCGGCTGCTGGATGGGCAT CACGCCGGCCGGCGCCACGCCGGCCTCGTTCATGAGCTACGGCATCGCCAAGCGGGTGTCGAAGAACGGCAAGAATTTCG GCCACGGCGAGATCGAAGGCGTGATCGCGCCGGAGACCGCGGCGCACGCCGCCGGCACCGCGGCGCTGCTGCCGATGCTG TCGCTCGGCGTGCCGGGATCGCCGACCGCAGCCGTGCTGCTCGGCGGCCTGCTGATCTGGGGTCTGCAGCCCGGCCCGAT GCTGTTCGTCGAGCAGAAGGAATTCGTCTGGGGCCTGATCGCCTCGATGTATCTCGGCAACATCGTCGGCCTCTTGATCG TGCTGACCTGCGTGCCGTTCTTCGCCGCGATCCTGCGGATTCCGTTCAGCATCGTCGCGCCGCTGATCCTGGTGCTGTGC GCGATCGGCGCCTATTCGGTGCACAACTCGACCTTCGACGTGATGCTGATGCTGGTGTTCGGCGTGATCGGCTATCTGCT GAAGAAGTGCAATTATCCGCTGGCGCCGCTGGTGCTGGCGATCGTGCTCGGCGACAAGGCGGAGGAAGCGTTCCGGCAGT CGCTGCTGGCCTCGCAGGGTGCGCTCGGCGTGTTTTTCTCCAACGGGCTGGTCGGCACGATCATGGCGCTCGGGCTGATC GCGCTGTTCTGGTCGCCGCTCAACGCCGGCTATGCCCGACTGCGATCCGCGGCGACCGGGCGGCCGCGGCCGGCCGGCCC CGGTTACGAATAG
Upstream 100 bases:
>100_bases TTTGCTCGGCCTCTAGGTTTTCGCGCCCCGCTTCTCTGCGTGGCCCGCGCTGTTGCTTTTGAAGACGATTTGACGCCCTC GTAGGTCAGGACCCTCCCGG
Downstream 100 bases:
>100_bases CGCCATGAGCATCGCATGCTTGAACGAGGCGCCGATCTGACCGATAAACCGCCGCACCGCGTCATTCGCGGCTGCAACTT CCACGATCGCCAGGCGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MEELTNLFHGFAVALMPFNILVMVIGIVLGVIIGVLPGLGGANGVAILLPLTFSMPPTSAIIMLSCIYWGALFGGAITSI LFNIPGEPWSVATTFDGYPMAQQGKAGEALTAAFTSSFVGALFAIIMITLVAPLVARFALEFGPAEKFAVYFLAFCSFIG LSKEPAFKTVAAMMLGFALAAVGLDSMTGQLRLTFGFTEMLNGFDFLIAVIGLFGIGEILLTMEDGLSFRGSKAKINLRV VLQTWKELPRYWMTSLRSSVIGCWMGITPAGATPASFMSYGIAKRVSKNGKNFGHGEIEGVIAPETAAHAAGTAALLPML SLGVPGSPTAAVLLGGLLIWGLQPGPMLFVEQKEFVWGLIASMYLGNIVGLLIVLTCVPFFAAILRIPFSIVAPLILVLC AIGAYSVHNSTFDVMLMLVFGVIGYLLKKCNYPLAPLVLAIVLGDKAEEAFRQSLLASQGALGVFFSNGLVGTIMALGLI ALFWSPLNAGYARLRSAATGRPRPAGPGYE
Sequences:
>Translated_510_residues MEELTNLFHGFAVALMPFNILVMVIGIVLGVIIGVLPGLGGANGVAILLPLTFSMPPTSAIIMLSCIYWGALFGGAITSI LFNIPGEPWSVATTFDGYPMAQQGKAGEALTAAFTSSFVGALFAIIMITLVAPLVARFALEFGPAEKFAVYFLAFCSFIG LSKEPAFKTVAAMMLGFALAAVGLDSMTGQLRLTFGFTEMLNGFDFLIAVIGLFGIGEILLTMEDGLSFRGSKAKINLRV VLQTWKELPRYWMTSLRSSVIGCWMGITPAGATPASFMSYGIAKRVSKNGKNFGHGEIEGVIAPETAAHAAGTAALLPML SLGVPGSPTAAVLLGGLLIWGLQPGPMLFVEQKEFVWGLIASMYLGNIVGLLIVLTCVPFFAAILRIPFSIVAPLILVLC AIGAYSVHNSTFDVMLMLVFGVIGYLLKKCNYPLAPLVLAIVLGDKAEEAFRQSLLASQGALGVFFSNGLVGTIMALGLI ALFWSPLNAGYARLRSAATGRPRPAGPGYE >Mature_510_residues MEELTNLFHGFAVALMPFNILVMVIGIVLGVIIGVLPGLGGANGVAILLPLTFSMPPTSAIIMLSCIYWGALFGGAITSI LFNIPGEPWSVATTFDGYPMAQQGKAGEALTAAFTSSFVGALFAIIMITLVAPLVARFALEFGPAEKFAVYFLAFCSFIG LSKEPAFKTVAAMMLGFALAAVGLDSMTGQLRLTFGFTEMLNGFDFLIAVIGLFGIGEILLTMEDGLSFRGSKAKINLRV VLQTWKELPRYWMTSLRSSVIGCWMGITPAGATPASFMSYGIAKRVSKNGKNFGHGEIEGVIAPETAAHAAGTAALLPML SLGVPGSPTAAVLLGGLLIWGLQPGPMLFVEQKEFVWGLIASMYLGNIVGLLIVLTCVPFFAAILRIPFSIVAPLILVLC AIGAYSVHNSTFDVMLMLVFGVIGYLLKKCNYPLAPLVLAIVLGDKAEEAFRQSLLASQGALGVFFSNGLVGTIMALGLI ALFWSPLNAGYARLRSAATGRPRPAGPGYE
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 53835; Mature: 53835
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEELTNLFHGFAVALMPFNILVMVIGIVLGVIIGVLPGLGGANGVAILLPLTFSMPPTSA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHH IIMLSCIYWGALFGGAITSILFNIPGEPWSVATTFDGYPMAQQGKAGEALTAAFTSSFVG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH ALFAIIMITLVAPLVARFALEFGPAEKFAVYFLAFCSFIGLSKEPAFKTVAAMMLGFALA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AVGLDSMTGQLRLTFGFTEMLNGFDFLIAVIGLFGIGEILLTMEDGLSFRGSKAKINLRV HHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHH VLQTWKELPRYWMTSLRSSVIGCWMGITPAGATPASFMSYGIAKRVSKNGKNFGHGEIEG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCE VIAPETAAHAAGTAALLPMLSLGVPGSPTAAVLLGGLLIWGLQPGPMLFVEQKEFVWGLI EECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHH ASMYLGNIVGLLIVLTCVPFFAAILRIPFSIVAPLILVLCAIGAYSVHNSTFDVMLMLVF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GVIGYLLKKCNYPLAPLVLAIVLGDKAEEAFRQSLLASQGALGVFFSNGLVGTIMALGLI HHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEHCCCCHHHHHHHHHHH ALFWSPLNAGYARLRSAATGRPRPAGPGYE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MEELTNLFHGFAVALMPFNILVMVIGIVLGVIIGVLPGLGGANGVAILLPLTFSMPPTSA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHH IIMLSCIYWGALFGGAITSILFNIPGEPWSVATTFDGYPMAQQGKAGEALTAAFTSSFVG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH ALFAIIMITLVAPLVARFALEFGPAEKFAVYFLAFCSFIGLSKEPAFKTVAAMMLGFALA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AVGLDSMTGQLRLTFGFTEMLNGFDFLIAVIGLFGIGEILLTMEDGLSFRGSKAKINLRV HHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHH VLQTWKELPRYWMTSLRSSVIGCWMGITPAGATPASFMSYGIAKRVSKNGKNFGHGEIEG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCE VIAPETAAHAAGTAALLPMLSLGVPGSPTAAVLLGGLLIWGLQPGPMLFVEQKEFVWGLI EECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHH ASMYLGNIVGLLIVLTCVPFFAAILRIPFSIVAPLILVLCAIGAYSVHNSTFDVMLMLVF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GVIGYLLKKCNYPLAPLVLAIVLGDKAEEAFRQSLLASQGALGVFFSNGLVGTIMALGLI HHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEHCCCCHHHHHHHHHHH ALFWSPLNAGYARLRSAATGRPRPAGPGYE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]