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The map label for this gene is yiaN [C]

Identifier: 86750502

GI number: 86750502

Start: 3875035

End: 3876876

Strand: Direct

Name: yiaN [C]

Synonym: RPB_3391

Alternate gene names: 86750502

Gene position: 3875035-3876876 (Clockwise)

Preceding gene: 86750501

Following gene: 86750505

Centisome position: 72.68

GC content: 65.26

Gene sequence:

>1842_bases
ATGACCGCTATGTTGATCCACTACATGGCGCCGATCATGTTCGGCTCCCTGGTGATCTTCCTGTTGCTCGGCTATCCGGT
CGCGTTCTCGCTCGCCGCCAACGGCCTGATGTTCGCCTTCATCGGCATCGAGCTCGGGCTGTTCCGCCCCGACTTCATGC
AGGCGCTGCCCGAACGCGTCTACGGCGTGATGAACAACGACACGCTGCTGGCGATTCCGTTCTTCACCTTCATGGGGCTG
GTGCTGGAGAGATCCGGCATGGCCGAGGACCTGCTCGAAACCATCGGGCAGTTGTTCGGCTCGATCCGCGGCGGCATCGC
CTACGCGGTGGTGTTCGTCGGCGCGCTGCTCGCCGCCACCACCGGCGTGGTCGCCGCCTCGGTGATCTCGATGGGCCTGA
TCTCGCTGCCGATCATGCTGCGCTACGGCTACGACCGCCGCGTCGCCACCGGCGTCATCGCCGCATCCGGCACGCTGGCG
CAGATCATTCCGCCGTCGCTGGTGCTGATCGTGATGGCCGACCAGCTTGGCCGCTCGGTCGGCGACATGTACGAAGGCGC
GTTCATTCCCGGCATCGTGCTGTCGCTGCTGTATGCCGGCTACATCTTCCTGGTGACGGTGTTCGCCCCGAAGGCGGCGC
CCGGCCTGCCGCTGGAAGCGCAGACGCTGCGCGAACACGACACCCTGCAGAACCCGATGATGATGCCGCTGGCGGCGATC
TCCGCCGCCGCGACCGCCTATTTCTTCGCGGTGCATCTCGACGGATTCAGCTGGAGCATGCCGGCGTTCGACAAGGTCGG
CCTGCCCGCGATGGCGATGCAGGGCTTCTGGTTCGTGGTGCTGCTCGCCGTGCTGTTCCGGCCGTTCATCGGCGTGATCC
GCACCATGACGATCTCGCTGTATCTGGTCGTGGTGCTGTCGACCACGATCGGCATCGTCGCGATGCGCTTCACCGATGTG
AAGGGCGGCGCGGACTACGTGGTGCTGACGATGTCGGTGACCGTCGGGCTGTCGTTCGTCATCGCCGTGCTCAACCGGGT
GCTGCGCCTGAAGCTGCTGTCGCGGCTCGCCGAGCAGGTCGTGTTCGTGATGGTGCCGCCGCTCGGGCTGATCTTCCTGG
TGCTCGGCACGATCTTCATCGGCGTCGCCACCCCGACGGAAGGCGGCGCGATGGGCGCCGCGGGCGCGGTGATTCTCGCG
CTGATGAAAGGACGGCTGACCTTCGACCTGACCCGCCAGGCCACCGAGGCGACCGCCAAGCTGTCGGCCTTCGTGGTGAT
GATCCTGGTCGGCGCCCGGGTGTTCTCGCTGACCTTCTACGGCGTCGACGGCCATCGCTGGGTCGAGGAGCTGCTGACCT
CGCTGCCCGGCGGCCAGCTCGGCTTCCTGGTCTTCGTCAACGCCCTGGTGTTCGTGCTGGCGTTCTTCCTCGACTTCTTC
GAGCTCGCCTTCATCATCATCCCGCTGCTCGGCCCCGCGGCGGAGAAGCTCGGCATCGACCTGATCTGGTTCGGCATCAT
CCTCGCGGTCAACATGCAGACCTCGTTCATGCATCCGCCGTTCGGCTTCGCGCTGTTCTATCTGCGCTCGGTGGCGCCGA
AGGAATCCTATCTCGACCGGGTCACCGGCAAGCGGATGGCGCCGATCACCACGGGACAGATCTATTGGGGCGCGGTGCCG
TTCGTGGTGATCCAGCTGATCATGGTCGGACTGGTGATCGCCTTCCCGGCGATGGTGATGCACTACAAGGGCGCCGCCAG
CACGGTCGATCCGTCGAAGATCGAATTCGACATCCCGCAGATGGAAACCCCGCAGCTCGATTTCGGCCCGCCGAAATTCT
GA

Upstream 100 bases:

>100_bases
CATGCGGCGGAACTCGAAGCCGAGCGGCTGGTGATGCATATCGCCGGCGAGAAGCAGCCTCGAGCCGAATAGTGGTCATT
GTGTTGGGGGACTGTTTCGA

Downstream 100 bases:

>100_bases
GATCGCGCGACCGCCGAAGCCTGCGGCCGGCTTCTCCACTTTCCGGACGTCATCCTGAGGTGCGCGCCGGGCCGCGTCCG
ACGCGGCTCGGTGCGCCTCG

Product: TRAP C4-dicarboxylate transport system permease DctM subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 613; Mature: 612

Protein sequence:

>613_residues
MTAMLIHYMAPIMFGSLVIFLLLGYPVAFSLAANGLMFAFIGIELGLFRPDFMQALPERVYGVMNNDTLLAIPFFTFMGL
VLERSGMAEDLLETIGQLFGSIRGGIAYAVVFVGALLAATTGVVAASVISMGLISLPIMLRYGYDRRVATGVIAASGTLA
QIIPPSLVLIVMADQLGRSVGDMYEGAFIPGIVLSLLYAGYIFLVTVFAPKAAPGLPLEAQTLREHDTLQNPMMMPLAAI
SAAATAYFFAVHLDGFSWSMPAFDKVGLPAMAMQGFWFVVLLAVLFRPFIGVIRTMTISLYLVVVLSTTIGIVAMRFTDV
KGGADYVVLTMSVTVGLSFVIAVLNRVLRLKLLSRLAEQVVFVMVPPLGLIFLVLGTIFIGVATPTEGGAMGAAGAVILA
LMKGRLTFDLTRQATEATAKLSAFVVMILVGARVFSLTFYGVDGHRWVEELLTSLPGGQLGFLVFVNALVFVLAFFLDFF
ELAFIIIPLLGPAAEKLGIDLIWFGIILAVNMQTSFMHPPFGFALFYLRSVAPKESYLDRVTGKRMAPITTGQIYWGAVP
FVVIQLIMVGLVIAFPAMVMHYKGAASTVDPSKIEFDIPQMETPQLDFGPPKF

Sequences:

>Translated_613_residues
MTAMLIHYMAPIMFGSLVIFLLLGYPVAFSLAANGLMFAFIGIELGLFRPDFMQALPERVYGVMNNDTLLAIPFFTFMGL
VLERSGMAEDLLETIGQLFGSIRGGIAYAVVFVGALLAATTGVVAASVISMGLISLPIMLRYGYDRRVATGVIAASGTLA
QIIPPSLVLIVMADQLGRSVGDMYEGAFIPGIVLSLLYAGYIFLVTVFAPKAAPGLPLEAQTLREHDTLQNPMMMPLAAI
SAAATAYFFAVHLDGFSWSMPAFDKVGLPAMAMQGFWFVVLLAVLFRPFIGVIRTMTISLYLVVVLSTTIGIVAMRFTDV
KGGADYVVLTMSVTVGLSFVIAVLNRVLRLKLLSRLAEQVVFVMVPPLGLIFLVLGTIFIGVATPTEGGAMGAAGAVILA
LMKGRLTFDLTRQATEATAKLSAFVVMILVGARVFSLTFYGVDGHRWVEELLTSLPGGQLGFLVFVNALVFVLAFFLDFF
ELAFIIIPLLGPAAEKLGIDLIWFGIILAVNMQTSFMHPPFGFALFYLRSVAPKESYLDRVTGKRMAPITTGQIYWGAVP
FVVIQLIMVGLVIAFPAMVMHYKGAASTVDPSKIEFDIPQMETPQLDFGPPKF
>Mature_612_residues
TAMLIHYMAPIMFGSLVIFLLLGYPVAFSLAANGLMFAFIGIELGLFRPDFMQALPERVYGVMNNDTLLAIPFFTFMGLV
LERSGMAEDLLETIGQLFGSIRGGIAYAVVFVGALLAATTGVVAASVISMGLISLPIMLRYGYDRRVATGVIAASGTLAQ
IIPPSLVLIVMADQLGRSVGDMYEGAFIPGIVLSLLYAGYIFLVTVFAPKAAPGLPLEAQTLREHDTLQNPMMMPLAAIS
AAATAYFFAVHLDGFSWSMPAFDKVGLPAMAMQGFWFVVLLAVLFRPFIGVIRTMTISLYLVVVLSTTIGIVAMRFTDVK
GGADYVVLTMSVTVGLSFVIAVLNRVLRLKLLSRLAEQVVFVMVPPLGLIFLVLGTIFIGVATPTEGGAMGAAGAVILAL
MKGRLTFDLTRQATEATAKLSAFVVMILVGARVFSLTFYGVDGHRWVEELLTSLPGGQLGFLVFVNALVFVLAFFLDFFE
LAFIIIPLLGPAAEKLGIDLIWFGIILAVNMQTSFMHPPFGFALFYLRSVAPKESYLDRVTGKRMAPITTGQIYWGAVPF
VVIQLIMVGLVIAFPAMVMHYKGAASTVDPSKIEFDIPQMETPQLDFGPPKF

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 66204; Mature: 66073

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAMLIHYMAPIMFGSLVIFLLLGYPVAFSLAANGLMFAFIGIELGLFRPDFMQALPERV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH
YGVMNNDTLLAIPFFTFMGLVLERSGMAEDLLETIGQLFGSIRGGIAYAVVFVGALLAAT
HHHCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGVVAASVISMGLISLPIMLRYGYDRRVATGVIAASGTLAQIIPPSLVLIVMADQLGRSV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCHHH
GDMYEGAFIPGIVLSLLYAGYIFLVTVFAPKAAPGLPLEAQTLREHDTLQNPMMMPLAAI
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHH
SAAATAYFFAVHLDGFSWSMPAFDKVGLPAMAMQGFWFVVLLAVLFRPFIGVIRTMTISL
HHHHHHHEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLVVVLSTTIGIVAMRFTDVKGGADYVVLTMSVTVGLSFVIAVLNRVLRLKLLSRLAEQV
HHHHHHHHHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFVMVPPLGLIFLVLGTIFIGVATPTEGGAMGAAGAVILALMKGRLTFDLTRQATEATAK
HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHH
LSAFVVMILVGARVFSLTFYGVDGHRWVEELLTSLPGGQLGFLVFVNALVFVLAFFLDFF
HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
ELAFIIIPLLGPAAEKLGIDLIWFGIILAVNMQTSFMHPPFGFALFYLRSVAPKESYLDR
HHHHHHHHHCCCHHHHHCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHCCCHHHHHHH
VTGKRMAPITTGQIYWGAVPFVVIQLIMVGLVIAFPAMVMHYKGAASTVDPSKIEFDIPQ
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
METPQLDFGPPKF
CCCCCCCCCCCCC
>Mature Secondary Structure 
TAMLIHYMAPIMFGSLVIFLLLGYPVAFSLAANGLMFAFIGIELGLFRPDFMQALPERV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH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CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]