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The map label for this gene is 86750327

Identifier: 86750327

GI number: 86750327

Start: 3678002

End: 3679420

Strand: Direct

Name: 86750327

Synonym: RPB_3216

Alternate gene names: NA

Gene position: 3678002-3679420 (Clockwise)

Preceding gene: 86750322

Following gene: 86750328

Centisome position: 68.98

GC content: 65.54

Gene sequence:

>1419_bases
ATGGCAGTTGCGTTCGATGAAATGAATGGGGCCGGCGGCGAGCTTCGCCAGGCCTATCAGGAATTGTCCCGCTGGCTGAG
CGAGACGCCGCCCGATTCTCTCGCCAATCGGCGCCAGGAAGCCGAATTGCTGTTCCGTCGGATCGGCATCACCTTCGCGG
TCTATGGCGACGCCGAGGCTCAGGAGCGGCTGATTCCGTTCGACGTGGTTCCGCGCATCCTGTCCGGGCGCGAATGGGCG
CTGATGGAACGCGGGCTGAAGCAGCGGGTCCGCGCGCTCAACATGTTCCTGCGCGACATCTATCACGGCCGCGACATCCT
GCGCGCCAACATCATCCCGCACGATCTGATCTTCCAGAACCCGGTGTTCCGGCCGGAGATGAACGGCCAGGCGGTCCCGC
ACGACGTCTATGTCCACATCGCCGGCATCGACATCGTCCGGGTCGACGACGAGAATTTCTACGTGCTCGAAGACAACGCC
CGGACCCCGTCCGGCGTGTCCTACATGCTGGAAAACCGCGAAGTCATGATGCGGCTGTTTCCGGACCTGTTCGCCCGGCA
CCGCATCGCCCCGGTCGAGCGCTATCCCGACGAACTGCTGACTGCGCTACGCTCGGTCGCGCCGGCGCATTCGTCGTCGG
AGCCCACCGTCGCGCTGATGACGCCGGGCATCTACAATTCGGCCTATTACGAGCATTCGTTTCTGGCCGACAAGCTCGGC
GTCGAGCTGGTCGAGGGTCGCGACCTCATCGTCAAGAACGACGAAGTGTTCATGCGCACCACCGAAGGCCTGAAGCGGGT
CGACGTGATCTACCGCCGGGTCGACGACGACTTCCTCGATCCGTTGACCTTCCGGCCGGATTCCGCGCTCGGCGTGCCGG
GCCTGATGTCGGCCTACCGCGCCGGCAACGTCACGCTGGCGAATGCGGTCGGCACCGGCATCGCCGACGACAAGGCCGTG
TACAGCTATATGCCGGACATCGTGAAGTTCTATCTCGGCGAGGAGCCGATCCTGAAGAACGTCCCGACCTGGCGCTGCCG
CGAGCCGGCCGACCTCGCTTACGTGCTCGACCATCTGCCCGAACTGGTGGTCAAGGAAGTCCACGGCTCCGGCGGCTACG
GCATGCTGATCGGACCGGCCGCCACCAAGGCGACCATCGAGGCGTTCCGCGACAAGCTGAAGCGCGAGCCGGAGGGCTTC
ATCGCCCAGCCGACGCTGGCGCTGTCGACCTGCCCGACCTGCACCGAATCCGGCCTCGCGCCGCGCCACGTCGATCTGCG
GCCGTTCGTGCTGACCGGCCGCGATCGCGTCACCATCGTCCCCGGCGGCCTCACCCGCGTGGCTCTGAAGGAAGGCTCGC
TGGTGGTCAATTCCAGCCAGGGCGGCGGCACCAAGGACACGTGGGTGCTGGATGAGTAA

Upstream 100 bases:

>100_bases
AATCGGTCCACTCCATCCATATCGCGATGGCCTAGCCCTTGCTACCATCCTGTTCCATGCGGCACTCTGGCGCGAACATC
TCTGGAATCAATTTGGCGAC

Downstream 100 bases:

>100_bases
TTTCGCAAAACAGGGGGCGTCATTGCGAGCGAAGCGAAGCAATCCAGGGCCGCAGGACCGCATCATCTCCTCTGGATTGC
TTCGTCGCTTCGCTCCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MAVAFDEMNGAGGELRQAYQELSRWLSETPPDSLANRRQEAELLFRRIGITFAVYGDAEAQERLIPFDVVPRILSGREWA
LMERGLKQRVRALNMFLRDIYHGRDILRANIIPHDLIFQNPVFRPEMNGQAVPHDVYVHIAGIDIVRVDDENFYVLEDNA
RTPSGVSYMLENREVMMRLFPDLFARHRIAPVERYPDELLTALRSVAPAHSSSEPTVALMTPGIYNSAYYEHSFLADKLG
VELVEGRDLIVKNDEVFMRTTEGLKRVDVIYRRVDDDFLDPLTFRPDSALGVPGLMSAYRAGNVTLANAVGTGIADDKAV
YSYMPDIVKFYLGEEPILKNVPTWRCREPADLAYVLDHLPELVVKEVHGSGGYGMLIGPAATKATIEAFRDKLKREPEGF
IAQPTLALSTCPTCTESGLAPRHVDLRPFVLTGRDRVTIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDE

Sequences:

>Translated_472_residues
MAVAFDEMNGAGGELRQAYQELSRWLSETPPDSLANRRQEAELLFRRIGITFAVYGDAEAQERLIPFDVVPRILSGREWA
LMERGLKQRVRALNMFLRDIYHGRDILRANIIPHDLIFQNPVFRPEMNGQAVPHDVYVHIAGIDIVRVDDENFYVLEDNA
RTPSGVSYMLENREVMMRLFPDLFARHRIAPVERYPDELLTALRSVAPAHSSSEPTVALMTPGIYNSAYYEHSFLADKLG
VELVEGRDLIVKNDEVFMRTTEGLKRVDVIYRRVDDDFLDPLTFRPDSALGVPGLMSAYRAGNVTLANAVGTGIADDKAV
YSYMPDIVKFYLGEEPILKNVPTWRCREPADLAYVLDHLPELVVKEVHGSGGYGMLIGPAATKATIEAFRDKLKREPEGF
IAQPTLALSTCPTCTESGLAPRHVDLRPFVLTGRDRVTIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDE
>Mature_471_residues
AVAFDEMNGAGGELRQAYQELSRWLSETPPDSLANRRQEAELLFRRIGITFAVYGDAEAQERLIPFDVVPRILSGREWAL
MERGLKQRVRALNMFLRDIYHGRDILRANIIPHDLIFQNPVFRPEMNGQAVPHDVYVHIAGIDIVRVDDENFYVLEDNAR
TPSGVSYMLENREVMMRLFPDLFARHRIAPVERYPDELLTALRSVAPAHSSSEPTVALMTPGIYNSAYYEHSFLADKLGV
ELVEGRDLIVKNDEVFMRTTEGLKRVDVIYRRVDDDFLDPLTFRPDSALGVPGLMSAYRAGNVTLANAVGTGIADDKAVY
SYMPDIVKFYLGEEPILKNVPTWRCREPADLAYVLDHLPELVVKEVHGSGGYGMLIGPAATKATIEAFRDKLKREPEGFI
AQPTLALSTCPTCTESGLAPRHVDLRPFVLTGRDRVTIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDE

Specific function: Unknown

COG id: COG2308

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis RV2411c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007297
- InterPro:   IPR007302
- InterPro:   IPR016450 [H]

Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]

EC number: NA

Molecular weight: Translated: 52758; Mature: 52627

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVAFDEMNGAGGELRQAYQELSRWLSETPPDSLANRRQEAELLFRRIGITFAVYGDAEA
CEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCH
QERLIPFDVVPRILSGREWALMERGLKQRVRALNMFLRDIYHGRDILRANIIPHDLIFQN
HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHCC
PVFRPEMNGQAVPHDVYVHIAGIDIVRVDDENFYVLEDNARTPSGVSYMLENREVMMRLF
CCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
PDLFARHRIAPVERYPDELLTALRSVAPAHSSSEPTVALMTPGIYNSAYYEHSFLADKLG
HHHHHHCCCCCHHCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHC
VELVEGRDLIVKNDEVFMRTTEGLKRVDVIYRRVDDDFLDPLTFRPDSALGVPGLMSAYR
CEEECCCEEEEECCCEEEEEHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCHHHHHHH
AGNVTLANAVGTGIADDKAVYSYMPDIVKFYLGEEPILKNVPTWRCREPADLAYVLDHLP
CCCEEEEHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHH
ELVVKEVHGSGGYGMLIGPAATKATIEAFRDKLKREPEGFIAQPTLALSTCPTCTESGLA
HHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHCCCC
PRHVDLRPFVLTGRDRVTIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDE
CCCCCCCEEEEECCCEEEEECCCCEEEEEECCCEEEECCCCCCCCCCEEECC
>Mature Secondary Structure 
AVAFDEMNGAGGELRQAYQELSRWLSETPPDSLANRRQEAELLFRRIGITFAVYGDAEA
EEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCH
QERLIPFDVVPRILSGREWALMERGLKQRVRALNMFLRDIYHGRDILRANIIPHDLIFQN
HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHCC
PVFRPEMNGQAVPHDVYVHIAGIDIVRVDDENFYVLEDNARTPSGVSYMLENREVMMRLF
CCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
PDLFARHRIAPVERYPDELLTALRSVAPAHSSSEPTVALMTPGIYNSAYYEHSFLADKLG
HHHHHHCCCCCHHCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHC
VELVEGRDLIVKNDEVFMRTTEGLKRVDVIYRRVDDDFLDPLTFRPDSALGVPGLMSAYR
CEEECCCEEEEECCCEEEEEHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCHHHHHHH
AGNVTLANAVGTGIADDKAVYSYMPDIVKFYLGEEPILKNVPTWRCREPADLAYVLDHLP
CCCEEEEHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHH
ELVVKEVHGSGGYGMLIGPAATKATIEAFRDKLKREPEGFIAQPTLALSTCPTCTESGLA
HHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHCCCC
PRHVDLRPFVLTGRDRVTIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDE
CCCCCCCEEEEECCCEEEEECCCCEEEEEECCCEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368738; 8590279; 8905231 [H]