Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is quiA [H]

Identifier: 86750322

GI number: 86750322

Start: 3672616

End: 3675129

Strand: Direct

Name: quiA [H]

Synonym: RPB_3211

Alternate gene names: 86750322

Gene position: 3672616-3675129 (Clockwise)

Preceding gene: 86750321

Following gene: 86750327

Centisome position: 68.88

GC content: 68.18

Gene sequence:

>2514_bases
ATGCCCGCCGATACGACGCATCCGAGATTCGCAAAGCGTCGCGGCTGGCGATGGCTCTATGTCGGCCTGGCGACATTGGT
CGGCGTACTCGGACTGATCATGGCCGTGCTCGGCGGCTGGCTGATCGCACTCGGCGGCTCCTTCTACTATCTTGGCGCGG
GCGCGTTGCTGGCGCTCGGCGCAGCCCTGGTCTGGACAGGCCGCGATCGCGCGGCCTTCCTGCTGTTCGCCGGCGCTTTC
CTGCTCACAATTATCTGGTCGCTGGTCGAGATCGCCGGCAAAGGCTGGCTGCCGGCCTGGGGCATCGATTTCGCCGGCCG
CGTCGGCGTTCTTGCAGCGCTGTTGGCCGGCGTCGGCCTCGCTTATCTGCTGTGGCGCGCCGCGCCGCGTTCGACGCCGC
GCAAACTCGCGCTGGCCTCAGCACTTAGTATCTTTATCGCTCTGGGTGGGCTCGTCTATGCAAGCTGGGAAACCACCGAA
CCGGCGAGCGAACGCGACAGCGCGGCGAGCGGCGCTCCCGCCGGCGGCGGCGCCATGCAGGAAGCCGGCGCGGACTGGAC
CGCGTTCGGCGGCACCACCGGAGGACGCCGCTATTCGAGCTTGAGCCAGGTGTCCACCGCCAACGTCACCACCTTGCAGG
AAGCCTGGACGTTTCGCAGCGGCGATCTCAATCCCGATCCCGGGCGCGTCTTCTATTCCGCCCAGAACACGCCGATCAAG
GTCGGGGACCTGCTCTACACCTGCACGCCGACCAATCGCGTGTTCGCACTCGATCCGGGCACCGGCAACGTGCGCTGGAG
TCACGACCCCAAGGTGCCGGCGAGCGCGATGGAGTCGCTGTTCACCGCGGCGTGTCGCGCCGTCGCCTATTTCGACGATG
GCGAAGCCGCGGGTGCGCCGGAATCGATTGCAACGATGCCCGCTGTTCCTGGCGCGATTCGTCCGGTGCCGCGCGGGGGC
AGCCAGTGTCACCGGCGCATCTTCGTCTCGACGGCGGACGGCCGGCTGATCGCGCTCGATGCGGTCGCCGGCTTCGTTTG
CCGGGAGTTCGGCGAAGACGGCGTCGTCGATTTGACCGCCGGCATGGGACTGCGCGAGAAGGGCTTCGCCTCCTCCACCT
CGGGCGCGACCATGGCGGGCGGGCTGCTCATTCTGGGCCATCAGGTGAGCGACAACCAGAGACGGGATGCGCCGTCCGGC
GTGGTGCGAGCCTATGACGCGCGCACCGGCGAACTCCGCTGGGCCGTGGACGCACTTCGTCCCGACGCCCAGGCCAAGCT
CGCGCCCGGCGAGATCTATCCCCGCGGCACGCCGAACGTCTGGAACATCATTTCGGCGGACGAATCATTGGGGCTGGCCT
TCCTCGCCACCGGCAATGCCGCCGCCGATCAATGGGGTGGCAACCGGACCCCGGAAGAAGACCGCTTCACCGATGCTGTC
GTCGCGGTCGATCTGCAGACCGGCGCGACGCGCTGGGTCTACACCACCGTCACCCACGACCTTTGGGACTACGACCTCGG
CGCTCAGCCGATGCTGGTCGACGTCACCATCAACGGCTCTGCCCATCGAGCCATCATGCAGGCCAGCAAGACCGGCAACC
TGTTTCTGCTGGACGCCCGCACCGGCGAGCCGCTCCGCCCGGTCGAGCAGCGCCCTACCCCGCAGGGCCCGCCTCCGGGC
GATTGGGTGGCGCCGACCCAGCCGCAATCCGTCTTCTTTCCGAACATCGGTGGCGTGCCGGGTCGCGATCCCGAGCAAAT
CGACGCGCGTCATGCCTTCGGGCTGACGCCGATCGACGCTGCGCTCTGCCGCATCAGTTTCCACCGTCACCGCTACGAGG
GCATCTTCACCCCGCCCACGGTCGACAAGGCAGGCCTGCTGCTGTTTCCGGGCACGGTCGGTGGCATGAATTGGGGCGGG
CTCGGCTACGACCCGCAGCGTCGCCTGATCATCGCCAACAATTCCCGGCTGCCCAACCTGGTGGTTCTGCATCCGCGCGC
GGACGTCGTCGATCAGCCTGTCGGATCGGGCGGCGCCAGACCGGATCAGAAAGTCGCCCCCCACTCCGGGACGCCCTTCG
CCGTGACCCGACCGATCTGGTGGTCGCCGCTCAGGGTGCCGTGCATCTCGCCGCCCTGGGGCTACATCTCGGCGACCAAT
ATCGACACCGGCCAGATCGTCTGGTCGAAGCCCTTGGGCACCGGCTTCGATTCCGGTCCGCTCGGTATTCCCACCCGTCT
CAAGATCGCGACGGGAACGCCGAACCTCGGCGGCCCGCTGGTGACGGCCGGCGGCTTGACCTTCATCGGCGCGACGCAGG
ACGATTTCCTGCGCGCGTTCGAGACCGCCACCGGACGGCTGCTGTGGGAAGCCCGGCTGCCCGCCGGCGCGCAGGCCGGC
CCGATGAGCTACGCGCACAACGGTCGGCAATACATCGCGGTCACGGCGACCGGTCACGCCCGCTTCGGCACCACGCCCGG
CGATTATCTCAAGGTCTACGCCCTGCCCCAATAG

Upstream 100 bases:

>100_bases
GGCGCATGCGCCGATGGGTCGCCGAGGTGCCTATCAGCTGGATGGAACACTGCCGTAGGCGGAACGTTGGCCGGGCAGCC
CCGCTGACGGAGATCTGCTC

Downstream 100 bases:

>100_bases
CGGCCGGCGCAAGTCAGTCCGCAGCCGCCTCGGAACGTCGGCCCGAGCAGCGCGGCCGATATCCCGCCTGCAACGCACGC
AACGTCGAGGGCGGCGTTAT

Product: Pyrrolo-quinoline quinone

Products: NA

Alternate protein names: NAD(P)-independent quinate dehydrogenase [H]

Number of amino acids: Translated: 837; Mature: 836

Protein sequence:

>837_residues
MPADTTHPRFAKRRGWRWLYVGLATLVGVLGLIMAVLGGWLIALGGSFYYLGAGALLALGAALVWTGRDRAAFLLFAGAF
LLTIIWSLVEIAGKGWLPAWGIDFAGRVGVLAALLAGVGLAYLLWRAAPRSTPRKLALASALSIFIALGGLVYASWETTE
PASERDSAASGAPAGGGAMQEAGADWTAFGGTTGGRRYSSLSQVSTANVTTLQEAWTFRSGDLNPDPGRVFYSAQNTPIK
VGDLLYTCTPTNRVFALDPGTGNVRWSHDPKVPASAMESLFTAACRAVAYFDDGEAAGAPESIATMPAVPGAIRPVPRGG
SQCHRRIFVSTADGRLIALDAVAGFVCREFGEDGVVDLTAGMGLREKGFASSTSGATMAGGLLILGHQVSDNQRRDAPSG
VVRAYDARTGELRWAVDALRPDAQAKLAPGEIYPRGTPNVWNIISADESLGLAFLATGNAAADQWGGNRTPEEDRFTDAV
VAVDLQTGATRWVYTTVTHDLWDYDLGAQPMLVDVTINGSAHRAIMQASKTGNLFLLDARTGEPLRPVEQRPTPQGPPPG
DWVAPTQPQSVFFPNIGGVPGRDPEQIDARHAFGLTPIDAALCRISFHRHRYEGIFTPPTVDKAGLLLFPGTVGGMNWGG
LGYDPQRRLIIANNSRLPNLVVLHPRADVVDQPVGSGGARPDQKVAPHSGTPFAVTRPIWWSPLRVPCISPPWGYISATN
IDTGQIVWSKPLGTGFDSGPLGIPTRLKIATGTPNLGGPLVTAGGLTFIGATQDDFLRAFETATGRLLWEARLPAGAQAG
PMSYAHNGRQYIAVTATGHARFGTTPGDYLKVYALPQ

Sequences:

>Translated_837_residues
MPADTTHPRFAKRRGWRWLYVGLATLVGVLGLIMAVLGGWLIALGGSFYYLGAGALLALGAALVWTGRDRAAFLLFAGAF
LLTIIWSLVEIAGKGWLPAWGIDFAGRVGVLAALLAGVGLAYLLWRAAPRSTPRKLALASALSIFIALGGLVYASWETTE
PASERDSAASGAPAGGGAMQEAGADWTAFGGTTGGRRYSSLSQVSTANVTTLQEAWTFRSGDLNPDPGRVFYSAQNTPIK
VGDLLYTCTPTNRVFALDPGTGNVRWSHDPKVPASAMESLFTAACRAVAYFDDGEAAGAPESIATMPAVPGAIRPVPRGG
SQCHRRIFVSTADGRLIALDAVAGFVCREFGEDGVVDLTAGMGLREKGFASSTSGATMAGGLLILGHQVSDNQRRDAPSG
VVRAYDARTGELRWAVDALRPDAQAKLAPGEIYPRGTPNVWNIISADESLGLAFLATGNAAADQWGGNRTPEEDRFTDAV
VAVDLQTGATRWVYTTVTHDLWDYDLGAQPMLVDVTINGSAHRAIMQASKTGNLFLLDARTGEPLRPVEQRPTPQGPPPG
DWVAPTQPQSVFFPNIGGVPGRDPEQIDARHAFGLTPIDAALCRISFHRHRYEGIFTPPTVDKAGLLLFPGTVGGMNWGG
LGYDPQRRLIIANNSRLPNLVVLHPRADVVDQPVGSGGARPDQKVAPHSGTPFAVTRPIWWSPLRVPCISPPWGYISATN
IDTGQIVWSKPLGTGFDSGPLGIPTRLKIATGTPNLGGPLVTAGGLTFIGATQDDFLRAFETATGRLLWEARLPAGAQAG
PMSYAHNGRQYIAVTATGHARFGTTPGDYLKVYALPQ
>Mature_836_residues
PADTTHPRFAKRRGWRWLYVGLATLVGVLGLIMAVLGGWLIALGGSFYYLGAGALLALGAALVWTGRDRAAFLLFAGAFL
LTIIWSLVEIAGKGWLPAWGIDFAGRVGVLAALLAGVGLAYLLWRAAPRSTPRKLALASALSIFIALGGLVYASWETTEP
ASERDSAASGAPAGGGAMQEAGADWTAFGGTTGGRRYSSLSQVSTANVTTLQEAWTFRSGDLNPDPGRVFYSAQNTPIKV
GDLLYTCTPTNRVFALDPGTGNVRWSHDPKVPASAMESLFTAACRAVAYFDDGEAAGAPESIATMPAVPGAIRPVPRGGS
QCHRRIFVSTADGRLIALDAVAGFVCREFGEDGVVDLTAGMGLREKGFASSTSGATMAGGLLILGHQVSDNQRRDAPSGV
VRAYDARTGELRWAVDALRPDAQAKLAPGEIYPRGTPNVWNIISADESLGLAFLATGNAAADQWGGNRTPEEDRFTDAVV
AVDLQTGATRWVYTTVTHDLWDYDLGAQPMLVDVTINGSAHRAIMQASKTGNLFLLDARTGEPLRPVEQRPTPQGPPPGD
WVAPTQPQSVFFPNIGGVPGRDPEQIDARHAFGLTPIDAALCRISFHRHRYEGIFTPPTVDKAGLLLFPGTVGGMNWGGL
GYDPQRRLIIANNSRLPNLVVLHPRADVVDQPVGSGGARPDQKVAPHSGTPFAVTRPIWWSPLRVPCISPPWGYISATNI
DTGQIVWSKPLGTGFDSGPLGIPTRLKIATGTPNLGGPLVTAGGLTFIGATQDDFLRAFETATGRLLWEARLPAGAQAGP
MSYAHNGRQYIAVTATGHARFGTTPGDYLKVYALPQ

Specific function: Can act either on quinate or on shikimate [H]

COG id: COG4993

COG function: function code G; Glucose dehydrogenase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1786316, Length=830, Percent_Identity=38.1927710843374, Blast_Score=520, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017511
- InterPro:   IPR019556
- InterPro:   IPR019551
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047
- InterPro:   IPR001479 [H]

Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]

EC number: =1.1.99.25 [H]

Molecular weight: Translated: 88612; Mature: 88480

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPADTTHPRFAKRRGWRWLYVGLATLVGVLGLIMAVLGGWLIALGGSFYYLGAGALLALG
CCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHC
AALVWTGRDRAAFLLFAGAFLLTIIWSLVEIAGKGWLPAWGIDFAGRVGVLAALLAGVGL
HHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AYLLWRAAPRSTPRKLALASALSIFIALGGLVYASWETTEPASERDSAASGAPAGGGAMQ
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCHHH
EAGADWTAFGGTTGGRRYSSLSQVSTANVTTLQEAWTFRSGDLNPDPGRVFYSAQNTPIK
HCCCCEEECCCCCCCCHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCEEEEECCCCCEE
VGDLLYTCTPTNRVFALDPGTGNVRWSHDPKVPASAMESLFTAACRAVAYFDDGEAAGAP
ECCEEEEECCCCEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCC
ESIATMPAVPGAIRPVPRGGSQCHRRIFVSTADGRLIALDAVAGFVCREFGEDGVVDLTA
HHHHHCCCCCCCCCCCCCCCHHHCEEEEEEECCCCEEEHHHHHHHHHHHHCCCCEEEEEC
GMGLREKGFASSTSGATMAGGLLILGHQVSDNQRRDAPSGVVRAYDARTGELRWAVDALR
CCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEHHHHC
PDAQAKLAPGEIYPRGTPNVWNIISADESLGLAFLATGNAAADQWGGNRTPEEDRFTDAV
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHCCCCCCCCHHCCCEEE
VAVDLQTGATRWVYTTVTHDLWDYDLGAQPMLVDVTINGSAHRAIMQASKTGNLFLLDAR
EEEEECCCCCEEEEEEEEHHHHCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEECC
TGEPLRPVEQRPTPQGPPPGDWVAPTQPQSVFFPNIGGVPGRDPEQIDARHAFGLTPIDA
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCHHHHCCCCHHHH
ALCRISFHRHRYEGIFTPPTVDKAGLLLFPGTVGGMNWGGLGYDPQRRLIIANNSRLPNL
HHHHHHHHHHHCCCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEE
VVLHPRADVVDQPVGSGGARPDQKVAPHSGTPFAVTRPIWWSPLRVPCISPPWGYISATN
EEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEECCCCCCCCCCEEECC
IDTGQIVWSKPLGTGFDSGPLGIPTRLKIATGTPNLGGPLVTAGGLTFIGATQDDFLRAF
CCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCEEEEECCHHHHHHHH
ETATGRLLWEARLPAGAQAGPMSYAHNGRQYIAVTATGHARFGTTPGDYLKVYALPQ
HHHCCEEEEEECCCCCCCCCCCHHCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
PADTTHPRFAKRRGWRWLYVGLATLVGVLGLIMAVLGGWLIALGGSFYYLGAGALLALG
CCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHC
AALVWTGRDRAAFLLFAGAFLLTIIWSLVEIAGKGWLPAWGIDFAGRVGVLAALLAGVGL
HHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AYLLWRAAPRSTPRKLALASALSIFIALGGLVYASWETTEPASERDSAASGAPAGGGAMQ
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCHHH
EAGADWTAFGGTTGGRRYSSLSQVSTANVTTLQEAWTFRSGDLNPDPGRVFYSAQNTPIK
HCCCCEEECCCCCCCCHHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCEEEEECCCCCEE
VGDLLYTCTPTNRVFALDPGTGNVRWSHDPKVPASAMESLFTAACRAVAYFDDGEAAGAP
ECCEEEEECCCCEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCC
ESIATMPAVPGAIRPVPRGGSQCHRRIFVSTADGRLIALDAVAGFVCREFGEDGVVDLTA
HHHHHCCCCCCCCCCCCCCCHHHCEEEEEEECCCCEEEHHHHHHHHHHHHCCCCEEEEEC
GMGLREKGFASSTSGATMAGGLLILGHQVSDNQRRDAPSGVVRAYDARTGELRWAVDALR
CCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEHHHHC
PDAQAKLAPGEIYPRGTPNVWNIISADESLGLAFLATGNAAADQWGGNRTPEEDRFTDAV
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHCCCCCCCCHHCCCEEE
VAVDLQTGATRWVYTTVTHDLWDYDLGAQPMLVDVTINGSAHRAIMQASKTGNLFLLDAR
EEEEECCCCCEEEEEEEEHHHHCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEECC
TGEPLRPVEQRPTPQGPPPGDWVAPTQPQSVFFPNIGGVPGRDPEQIDARHAFGLTPIDA
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCHHHHCCCCHHHH
ALCRISFHRHRYEGIFTPPTVDKAGLLLFPGTVGGMNWGGLGYDPQRRLIIANNSRLPNL
HHHHHHHHHHHCCCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEE
VVLHPRADVVDQPVGSGGARPDQKVAPHSGTPFAVTRPIWWSPLRVPCISPPWGYISATN
EEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEECCCCCCCCCCEEECC
IDTGQIVWSKPLGTGFDSGPLGIPTRLKIATGTPNLGGPLVTAGGLTFIGATQDDFLRAF
CCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCEEEEECCHHHHHHHH
ETATGRLLWEARLPAGAQAGPMSYAHNGRQYIAVTATGHARFGTTPGDYLKVYALPQ
HHHCCEEEEEECCCCCCCCCCCHHCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8002591; 7592351 [H]