| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is bcp [H]
Identifier: 86750119
GI number: 86750119
Start: 3419750
End: 3420418
Strand: Direct
Name: bcp [H]
Synonym: RPB_3002
Alternate gene names: 86750119
Gene position: 3419750-3420418 (Clockwise)
Preceding gene: 86750117
Following gene: 86750120
Centisome position: 64.14
GC content: 65.47
Gene sequence:
>669_bases ATGTCCAAGCAAACGCGCAAGAATCCCTCGAAATCCGAAAGCCTGAAGACGCCGGCGGCGAAATCGGCAGCCGCGGCCGG AATGGCTGCCAAGTCGTCCCCTACCAAGAAGTCGTCCCCCACCAAGACGACCAAGGCCAAGGCGAAGCCGGCGAGCCCGG CCAAGGCCAAAACGCCCGCGGCCAAACCCGCCGCTCCGGCTGTCGCCGGTCTTGCCGAGGGCGCCCAGGCGCCGGCCTTC ACGCTGACCCGCGACGGCGGCGAAACCGTCACACTGGCAAGCTTTTCCGGAAAGAAGCTCGTGCTGTTCTTCTACCCGCG CGCCAACACGCCGGGCTGCACCAAGGAGGCGATCGACTTCACCCGACTGAAGCCCGCCTTCGAGACCTGCGGCGCCGCGG TGGTCGGCGTCTCGGCGGATTCGGTCAAGGCGCAGGATTCCTTCCGCGACAAGCACGGCCTGGCGACACCGCTGCTGTCC GACCCCACTCACGCGATGCTCGAAGCGTACGGCGCATGGGGCGAAAAATCCTTATACGGCCGAAAGTTCGAGGGCATTGT TCGCAGTACGGTTCTGATCGGCCGCGACGGTAAAATCGCGCGGGTGTGGCGCAATGTGAAGGTCGACGGCCATGCCGATC AGGTCCTCGCCGCCGCGCAATTGCTGTGA
Upstream 100 bases:
>100_bases ACCATATCCCGAGGCCGGCGGATTTGCCCAGCAGCGGCAGTGCCGCAGCGAACTCCGGAGCGCCTTGTTTGACCCGTCGA AAGCGACGAAAGGAAGGCGT
Downstream 100 bases:
>100_bases CTGCGTTCTCCGAAAATTAACCATGAGGGGGTCAAATCTGCCCGCGCATTGAGCCGACGACCTGTATCCGTCCGGCGCGG GAGTATCGATGCCCTACCGT
Product: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSKQTRKNPSKSESLKTPAAKSAAAAGMAAKSSPTKKSSPTKTTKAKAKPASPAKAKTPAAKPAAPAVAGLAEGAQAPAF TLTRDGGETVTLASFSGKKLVLFFYPRANTPGCTKEAIDFTRLKPAFETCGAAVVGVSADSVKAQDSFRDKHGLATPLLS DPTHAMLEAYGAWGEKSLYGRKFEGIVRSTVLIGRDGKIARVWRNVKVDGHADQVLAAAQLL
Sequences:
>Translated_222_residues MSKQTRKNPSKSESLKTPAAKSAAAAGMAAKSSPTKKSSPTKTTKAKAKPASPAKAKTPAAKPAAPAVAGLAEGAQAPAF TLTRDGGETVTLASFSGKKLVLFFYPRANTPGCTKEAIDFTRLKPAFETCGAAVVGVSADSVKAQDSFRDKHGLATPLLS DPTHAMLEAYGAWGEKSLYGRKFEGIVRSTVLIGRDGKIARVWRNVKVDGHADQVLAAAQLL >Mature_221_residues SKQTRKNPSKSESLKTPAAKSAAAAGMAAKSSPTKKSSPTKTTKAKAKPASPAKAKTPAAKPAAPAVAGLAEGAQAPAFT LTRDGGETVTLASFSGKKLVLFFYPRANTPGCTKEAIDFTRLKPAFETCGAAVVGVSADSVKAQDSFRDKHGLATPLLSD PTHAMLEAYGAWGEKSLYGRKFEGIVRSTVLIGRDGKIARVWRNVKVDGHADQVLAAAQLL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=146, Percent_Identity=39.7260273972603, Blast_Score=116, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6322180, Length=159, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 23096; Mature: 22964
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQTRKNPSKSESLKTPAAKSAAAAGMAAKSSPTKKSSPTKTTKAKAKPASPAKAKTPA CCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AKPAAPAVAGLAEGAQAPAFTLTRDGGETVTLASFSGKKLVLFFYPRANTPGCTKEAIDF CCCCCHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHH TRLKPAFETCGAAVVGVSADSVKAQDSFRDKHGLATPLLSDPTHAMLEAYGAWGEKSLYG HHCCHHHHHCCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCC RKFEGIVRSTVLIGRDGKIARVWRNVKVDGHADQVLAAAQLL HHHHHHHHHEEEECCCCCEEEHHHCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SKQTRKNPSKSESLKTPAAKSAAAAGMAAKSSPTKKSSPTKTTKAKAKPASPAKAKTPA CCCCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AKPAAPAVAGLAEGAQAPAFTLTRDGGETVTLASFSGKKLVLFFYPRANTPGCTKEAIDF CCCCCHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHH TRLKPAFETCGAAVVGVSADSVKAQDSFRDKHGLATPLLSDPTHAMLEAYGAWGEKSLYG HHCCHHHHHCCCEEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCC RKFEGIVRSTVLIGRDGKIARVWRNVKVDGHADQVLAAAQLL HHHHHHHHHEEEECCCCCEEEHHHCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]