| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749714
Identifier: 86749714
GI number: 86749714
Start: 2977141
End: 2978679
Strand: Direct
Name: 86749714
Synonym: RPB_2596
Alternate gene names: NA
Gene position: 2977141-2978679 (Clockwise)
Preceding gene: 86749713
Following gene: 86749715
Centisome position: 55.84
GC content: 72.06
Gene sequence:
>1539_bases ATGCTGCCGTCGCTCGCGCACGCCCACGCCAGCCTGGTCGCCAGTGATCCGGCTGCGGAGGCGGTGCTGGCGGCCGCGCC CGCGACCATCACCCTGACCTTCAACGAGCCGGTCACGCCGCTGGCGCTGCAATTGATAGATGCCAGGGGCCGCTCGAGTG CCATCACTGAAGTCGCGACCAATGGGGACAGGCTGAGCTTCGCACCGCCGTCGTTGCTCGGGGCGGGCGGCCACGTGCTG AGCTGGCGCGTGGTGTCGGCCGACGGCCATCCGGTCGGCGGCTCGCTGACATTCTGGATCGGCACGCCGGGCGCGAGCTT GCCGGCGATTATCGTACCCGACGATCCGGCGCGGCGAGCGGCGATCTGGGCGACGCGCGTCATGCTCGAATTGACGCTGC TGGCGGCGCCCGGCGGCGCCTTCTTCCTCGCCTGGATCGCTTCGGCTGCCTTGCCGGTCCTCGTGGCCGGCTGCGGGGCG GTGGCGGTGCTGGGCCTCGGCGCGCTCGCGCTGTCGGTCGGGTTGCAAGGCCTCGACATCCTCGACGCGCCGTTCGCGGA GCTCGGCAGCGCCGCGGTGTGGTGGGAAGGGGCAACCGGCTCGTTCGGTCGCTCGGCGGCGATCGCCGCCGTCGCATTCG GCCTGACACTGTCGGCGCTGCTCGGCCGCGGCGCGCCGGCGCGCTTGCTGTCGTTCGGCGCGGTGCTCGGCGTCGGTGCG GCGCTCGCGGCGAGCGGACATGCCGCGACCGCCGAGCCGCGCTGGCTCGCGACCGCTGCGGTGCTGGTGCACGGCGTGAG CCTGGCGTTGTGGGTCGGCGCGCTGCTGCCGCTCGCCGTCATGGTCGGACCGAACCACGCCACGGCGAACGTCACTCTGC GCCGGTTCTCCCGCACGATCCCGATCGCGATTGCAACGCTGCTGATCAGCGGCGTCGTTCTCGGCGCGATCCAGCTCGGC CGGATCGAGGCGCTGTGGACGTCGGACTACGGCCGCATTCTGTTCGCCAAACTCGCGCTGGTGGTGGCGCTGCTGCTGAT CGCGCTGTGGAATCGCCGCCGGGTGACGCCGCTTCTCGCCGCCGGAACACCACACGCGGCCTATGCGCTGCGCCGGACGA TCGCGGCCGAGCTGGTCCTGGTGATCGCGATCCTCGGGCTGGTCGGGCTGTGGCGGTTCACGCCGCCGCCACGCGCCGCG ACAGCCGCTGCTGCGGAGGACCGCGCCTTCGCCCATCTCCACACCGGGCGTGCGATGGCCAACGTCACCCTGACACCGGG CCACGCTGGTCCGATCGAGATTGAGGTCATGCTGCAGACGCCCGACGAGACGCCGCTGCAAGCGCAGGCGTTGACCGTGA CGCTCGCCAATCCGGACGCGGGGATCGAGCCGGCCTCCGCCGAGGCGCGGCGTCAGCCGGACGGGCCATGGCGGGTGCGG ATGTCGGCGCCGGTGCCCGGGCGCTGGTCGCTGACGCTCGGCATCCTGATCTCGGATTTCGACAAAGTGACCATCGCGGC GCCGGTTGTGATCCGGTAA
Upstream 100 bases:
>100_bases CGCTGCGGCTGAAGCCGAAGGCTCCGTGATCGGAGCTCCCGCCCGGTCGCGGCGCAATGCCGGGCGATGGCTGGCATGGG TGACGGCGCTCGCCGTCCTC
Downstream 100 bases:
>100_bases TCGCGGATGCCGGCGCCGACCGCAAAGTGGCGTAGATTCCGGCAGTTTTCGCAAAGTTGGGCGGCCGCGCCCTTGTGTTT TGCCGCCCGATCCGGTTTCA
Product: copper resistance protein
Products: NA
Alternate protein names: Copper Resistance D; Copper Resistance Protein; Copper Resistance Protein CopC; Copper Resistance D Domain-Containing Protein
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MLPSLAHAHASLVASDPAAEAVLAAAPATITLTFNEPVTPLALQLIDARGRSSAITEVATNGDRLSFAPPSLLGAGGHVL SWRVVSADGHPVGGSLTFWIGTPGASLPAIIVPDDPARRAAIWATRVMLELTLLAAPGGAFFLAWIASAALPVLVAGCGA VAVLGLGALALSVGLQGLDILDAPFAELGSAAVWWEGATGSFGRSAAIAAVAFGLTLSALLGRGAPARLLSFGAVLGVGA ALAASGHAATAEPRWLATAAVLVHGVSLALWVGALLPLAVMVGPNHATANVTLRRFSRTIPIAIATLLISGVVLGAIQLG RIEALWTSDYGRILFAKLALVVALLLIALWNRRRVTPLLAAGTPHAAYALRRTIAAELVLVIAILGLVGLWRFTPPPRAA TAAAAEDRAFAHLHTGRAMANVTLTPGHAGPIEIEVMLQTPDETPLQAQALTVTLANPDAGIEPASAEARRQPDGPWRVR MSAPVPGRWSLTLGILISDFDKVTIAAPVVIR
Sequences:
>Translated_512_residues MLPSLAHAHASLVASDPAAEAVLAAAPATITLTFNEPVTPLALQLIDARGRSSAITEVATNGDRLSFAPPSLLGAGGHVL SWRVVSADGHPVGGSLTFWIGTPGASLPAIIVPDDPARRAAIWATRVMLELTLLAAPGGAFFLAWIASAALPVLVAGCGA VAVLGLGALALSVGLQGLDILDAPFAELGSAAVWWEGATGSFGRSAAIAAVAFGLTLSALLGRGAPARLLSFGAVLGVGA ALAASGHAATAEPRWLATAAVLVHGVSLALWVGALLPLAVMVGPNHATANVTLRRFSRTIPIAIATLLISGVVLGAIQLG RIEALWTSDYGRILFAKLALVVALLLIALWNRRRVTPLLAAGTPHAAYALRRTIAAELVLVIAILGLVGLWRFTPPPRAA TAAAAEDRAFAHLHTGRAMANVTLTPGHAGPIEIEVMLQTPDETPLQAQALTVTLANPDAGIEPASAEARRQPDGPWRVR MSAPVPGRWSLTLGILISDFDKVTIAAPVVIR >Mature_512_residues MLPSLAHAHASLVASDPAAEAVLAAAPATITLTFNEPVTPLALQLIDARGRSSAITEVATNGDRLSFAPPSLLGAGGHVL SWRVVSADGHPVGGSLTFWIGTPGASLPAIIVPDDPARRAAIWATRVMLELTLLAAPGGAFFLAWIASAALPVLVAGCGA VAVLGLGALALSVGLQGLDILDAPFAELGSAAVWWEGATGSFGRSAAIAAVAFGLTLSALLGRGAPARLLSFGAVLGVGA ALAASGHAATAEPRWLATAAVLVHGVSLALWVGALLPLAVMVGPNHATANVTLRRFSRTIPIAIATLLISGVVLGAIQLG RIEALWTSDYGRILFAKLALVVALLLIALWNRRRVTPLLAAGTPHAAYALRRTIAAELVLVIAILGLVGLWRFTPPPRAA TAAAAEDRAFAHLHTGRAMANVTLTPGHAGPIEIEVMLQTPDETPLQAQALTVTLANPDAGIEPASAEARRQPDGPWRVR MSAPVPGRWSLTLGILISDFDKVTIAAPVVIR
Specific function: Unknown
COG id: COG1276
COG function: function code P; Putative copper export protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52446; Mature: 52446
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPSLAHAHASLVASDPAAEAVLAAAPATITLTFNEPVTPLALQLIDARGRSSAITEVAT CCCCHHHHHHHHHCCCCHHHHHHEECCEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHC NGDRLSFAPPSLLGAGGHVLSWRVVSADGHPVGGSLTFWIGTPGASLPAIIVPDDPARRA CCCEEEECCCHHHCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCHHH AIWATRVMLELTLLAAPGGAFFLAWIASAALPVLVAGCGAVAVLGLGALALSVGLQGLDI HHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LDAPFAELGSAAVWWEGATGSFGRSAAIAAVAFGLTLSALLGRGAPARLLSFGAVLGVGA CCCCHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALAASGHAATAEPRWLATAAVLVHGVSLALWVGALLPLAVMVGPNHATANVTLRRFSRTI HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEHHHHHCCH PIAIATLLISGVVLGAIQLGRIEALWTSDYGRILFAKLALVVALLLIALWNRRRVTPLLA HHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE AGTPHAAYALRRTIAAELVLVIAILGLVGLWRFTPPPRAATAAAAEDRAFAHLHTGRAMA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEECCCEEE NVTLTPGHAGPIEIEVMLQTPDETPLQAQALTVTLANPDAGIEPASAEARRQPDGPWRVR EEEECCCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCHHCCCCCCCEEEE MSAPVPGRWSLTLGILISDFDKVTIAAPVVIR ECCCCCCCEEEEEEEEECCCCCEEEECCEEEC >Mature Secondary Structure MLPSLAHAHASLVASDPAAEAVLAAAPATITLTFNEPVTPLALQLIDARGRSSAITEVAT CCCCHHHHHHHHHCCCCHHHHHHEECCEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHC NGDRLSFAPPSLLGAGGHVLSWRVVSADGHPVGGSLTFWIGTPGASLPAIIVPDDPARRA CCCEEEECCCHHHCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCHHH AIWATRVMLELTLLAAPGGAFFLAWIASAALPVLVAGCGAVAVLGLGALALSVGLQGLDI HHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LDAPFAELGSAAVWWEGATGSFGRSAAIAAVAFGLTLSALLGRGAPARLLSFGAVLGVGA CCCCHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALAASGHAATAEPRWLATAAVLVHGVSLALWVGALLPLAVMVGPNHATANVTLRRFSRTI HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEHHHHHCCH PIAIATLLISGVVLGAIQLGRIEALWTSDYGRILFAKLALVVALLLIALWNRRRVTPLLA HHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE AGTPHAAYALRRTIAAELVLVIAILGLVGLWRFTPPPRAATAAAAEDRAFAHLHTGRAMA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEECCCEEE NVTLTPGHAGPIEIEVMLQTPDETPLQAQALTVTLANPDAGIEPASAEARRQPDGPWRVR EEEECCCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCHHCCCCCCCEEEE MSAPVPGRWSLTLGILISDFDKVTIAAPVVIR ECCCCCCCEEEEEEEEECCCCCEEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA