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The map label for this gene is 86749707

Identifier: 86749707

GI number: 86749707

Start: 2971166

End: 2972836

Strand: Direct

Name: 86749707

Synonym: RPB_2589

Alternate gene names: NA

Gene position: 2971166-2972836 (Clockwise)

Preceding gene: 86749706

Following gene: 86749708

Centisome position: 55.73

GC content: 66.37

Gene sequence:

>1671_bases
ATGGCACGACCCGACGATCTGGTTTTTGCACCGCTTGGCGGTGTCGGCGAAATCGGCATGAATTTGTCGATCTACGGGCT
CGGCAACCGCCAGCAGCGGAGCTGGCTTGCGGTCGATCTCGGCGTGTCGTTCGGCGACGAGGAGCATCTGCCCGGCATCG
ATCTGATCATGCCGGACATCCGCTTTCTCGAGAAAGAGAAGAAGAACCTCGTTGGCATCGTGCTGACGCACGCCCACGAG
GATCATTTCGGCGCCATCATCGATCTGTGGCCGAAGCTGCGCTGTCCGATCTACGCCACCAAGTTCAGCGCCTCGCTGTT
CGCCGCCAAGCTCGCGGCCGAGCGCACCACGCTGAAGATCCCGATCACCGTGGTGCCGTCCGGCGGCCGCATCGACCTCG
GCCCGTTCAACGTCGAGTTCATCCCGGTCGCCCATTCGATTCCGGAATCGCACGCGCTGGCGATCCGCACCTCGGCGGGG
CTGGTGCTGCACACCGGCGACTGGAAGATCGACCCGACTCCCGTGGTCGGGCCGCCGACCGACGAGAAGCGGCTGCGCGA
ACTCGGCGACGAGGGCGTGCTGGCGCTGATCGGCGATTCCACCAACGCGGTGCGCGACGGCCACTCGCCGTCGGAGACCG
AAGTGGGGGCGTCGCTGACCGGTCTGATCAAGGCCGCCAAAGGCCGCGTCGCAGTCACCACCTTCGCCTCCAATGTCGGG
CGCATGCGCGCCGTCGCCGACGCCGCGAAGGCGGCGGGCCGGGAAGTGGTGCTGGTCGGGCGCGCGATGGATCGCGTCTC
CCAGGTCGCGCGCGAGTGTGGTTATTTCGACGGGGTGCAGGGCTTTCGCGGCTCCGAATATTACGGGCATTTTCCGCCGG
ACAAGGTGCTGGCGCTGTGCACCGGCAGCCAGGGCGAGCCCCGCGCGGCGCTGGCGCGGATTGCGCGCGACGATCACCCC
GACGTCACGCTGAACAAGGGCGACTGCGTGATCTTCTCCTCCCGCACCATTCCGGGCAACGAAAAGGCGGTCGGCAGCAT
CATCAACGGGCTGGTCAATCAGGGCATCGAGGTGATCACCGACCGCGATCATCTGGTGCACGTCTCCGGCCATCCGCGGC
GCGAGGAATTGCGCGAGCTGATCTCGTGGGTGCGGCCGCAATTGCTGATTCCGGTGCACGGAGAAGCCCTGCATCTCAAC
GAGCACGCCAAGCTGGCGCGGCAGATGGGCGTGCCCAAGGTGCTGACCTGCCGCAACGGCGACCTGATCCGGCTCGGGCC
GGGCGATCCGGCGATCATCGACCAATTGCCGGCTGGTCGGCTGTACAAGGATGGGACCATCCTGGAAGAGGAAAAGTCGC
GCGCGGTCGCCGAGCGTCGCAAGATGGCGTTCGCCGGGTGTGCCTTCGTGGCGCTGGCGCTGACGCAGGCAGGTGAGATG
GTCGACGATCCGGAAGTCGAATTGATCGGCGTTCCGGAAAACAACAGTGCCGGCGAGCCGCTTGACGACATCGTGTTCGA
CGCCGTGGTCGCCACCGTCGAGGGCCTGCCGAAAGCGCGCCGGCGCGATCCGGATGCCGTGGCCGAATCGGTGCGTCGCA
CCGTGCGCTCGACGGTGCAGGCGGAGTGGGGCAAGAAGCCGCTGTGTTTCGTGCACGTGCTGAAGGTTTGA

Upstream 100 bases:

>100_bases
CGGGCTGTATGGTCCTGATAACGTCCGATCGGAGACGCATTCCGATCGCGGCCGGCGACGTCTATTTCGGCGATGCGGCG
TCAGCAAAGGCTGCAGACTA

Downstream 100 bases:

>100_bases
GAGTCTATAACTAACAAGATCAAGAACGGAGGAGTGTCATGCTGGGGCGGCTGAATCACGTGGCGATCGCGGTGAAGGAT
GCGGAGCAGGCGGCGAAGAT

Product: Beta-lactamase-like protein

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 556; Mature: 555

Protein sequence:

>556_residues
MARPDDLVFAPLGGVGEIGMNLSIYGLGNRQQRSWLAVDLGVSFGDEEHLPGIDLIMPDIRFLEKEKKNLVGIVLTHAHE
DHFGAIIDLWPKLRCPIYATKFSASLFAAKLAAERTTLKIPITVVPSGGRIDLGPFNVEFIPVAHSIPESHALAIRTSAG
LVLHTGDWKIDPTPVVGPPTDEKRLRELGDEGVLALIGDSTNAVRDGHSPSETEVGASLTGLIKAAKGRVAVTTFASNVG
RMRAVADAAKAAGREVVLVGRAMDRVSQVARECGYFDGVQGFRGSEYYGHFPPDKVLALCTGSQGEPRAALARIARDDHP
DVTLNKGDCVIFSSRTIPGNEKAVGSIINGLVNQGIEVITDRDHLVHVSGHPRREELRELISWVRPQLLIPVHGEALHLN
EHAKLARQMGVPKVLTCRNGDLIRLGPGDPAIIDQLPAGRLYKDGTILEEEKSRAVAERRKMAFAGCAFVALALTQAGEM
VDDPEVELIGVPENNSAGEPLDDIVFDAVVATVEGLPKARRRDPDAVAESVRRTVRSTVQAEWGKKPLCFVHVLKV

Sequences:

>Translated_556_residues
MARPDDLVFAPLGGVGEIGMNLSIYGLGNRQQRSWLAVDLGVSFGDEEHLPGIDLIMPDIRFLEKEKKNLVGIVLTHAHE
DHFGAIIDLWPKLRCPIYATKFSASLFAAKLAAERTTLKIPITVVPSGGRIDLGPFNVEFIPVAHSIPESHALAIRTSAG
LVLHTGDWKIDPTPVVGPPTDEKRLRELGDEGVLALIGDSTNAVRDGHSPSETEVGASLTGLIKAAKGRVAVTTFASNVG
RMRAVADAAKAAGREVVLVGRAMDRVSQVARECGYFDGVQGFRGSEYYGHFPPDKVLALCTGSQGEPRAALARIARDDHP
DVTLNKGDCVIFSSRTIPGNEKAVGSIINGLVNQGIEVITDRDHLVHVSGHPRREELRELISWVRPQLLIPVHGEALHLN
EHAKLARQMGVPKVLTCRNGDLIRLGPGDPAIIDQLPAGRLYKDGTILEEEKSRAVAERRKMAFAGCAFVALALTQAGEM
VDDPEVELIGVPENNSAGEPLDDIVFDAVVATVEGLPKARRRDPDAVAESVRRTVRSTVQAEWGKKPLCFVHVLKV
>Mature_555_residues
ARPDDLVFAPLGGVGEIGMNLSIYGLGNRQQRSWLAVDLGVSFGDEEHLPGIDLIMPDIRFLEKEKKNLVGIVLTHAHED
HFGAIIDLWPKLRCPIYATKFSASLFAAKLAAERTTLKIPITVVPSGGRIDLGPFNVEFIPVAHSIPESHALAIRTSAGL
VLHTGDWKIDPTPVVGPPTDEKRLRELGDEGVLALIGDSTNAVRDGHSPSETEVGASLTGLIKAAKGRVAVTTFASNVGR
MRAVADAAKAAGREVVLVGRAMDRVSQVARECGYFDGVQGFRGSEYYGHFPPDKVLALCTGSQGEPRAALARIARDDHPD
VTLNKGDCVIFSSRTIPGNEKAVGSIINGLVNQGIEVITDRDHLVHVSGHPRREELRELISWVRPQLLIPVHGEALHLNE
HAKLARQMGVPKVLTCRNGDLIRLGPGDPAIIDQLPAGRLYKDGTILEEEKSRAVAERRKMAFAGCAFVALALTQAGEMV
DDPEVELIGVPENNSAGEPLDDIVFDAVVATVEGLPKARRRDPDAVAESVRRTVRSTVQAEWGKKPLCFVHVLKV

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 60023; Mature: 59891

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPDDLVFAPLGGVGEIGMNLSIYGLGNRQQRSWLAVDLGVSFGDEEHLPGIDLIMPDI
CCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCH
RFLEKEKKNLVGIVLTHAHEDHFGAIIDLWPKLRCPIYATKFSASLFAAKLAAERTTLKI
HHHHHHHCCEEEEEEEECCCCCCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCEEEEE
PITVVPSGGRIDLGPFNVEFIPVAHSIPESHALAIRTSAGLVLHTGDWKIDPTPVVGPPT
EEEEECCCCEEECCCCCEEEEEEECCCCCCCEEEEEECCCEEEECCCCEECCCCCCCCCC
DEKRLRELGDEGVLALIGDSTNAVRDGHSPSETEVGASLTGLIKAAKGRVAVTTFASNVG
CHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCEEEEEEHHCHH
RMRAVADAAKAAGREVVLVGRAMDRVSQVARECGYFDGVQGFRGSEYYGHFPPDKVLALC
HHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHEEEEE
TGSQGEPRAALARIARDDHPDVTLNKGDCVIFSSRTIPGNEKAVGSIINGLVNQGIEVIT
ECCCCCHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEE
DRDHLVHVSGHPRREELRELISWVRPQLLIPVHGEALHLNEHAKLARQMGVPKVLTCRNG
CCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCEEECCHHHHHHHHCCCCEEEEECCC
DLIRLGPGDPAIIDQLPAGRLYKDGTILEEEKSRAVAERRKMAFAGCAFVALALTQAGEM
CEEEECCCCCHHHHCCCCCCEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VDDPEVELIGVPENNSAGEPLDDIVFDAVVATVEGLPKARRRDPDAVAESVRRTVRSTVQ
CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHH
AEWGKKPLCFVHVLKV
HHCCCCCEEEEEEECC
>Mature Secondary Structure 
ARPDDLVFAPLGGVGEIGMNLSIYGLGNRQQRSWLAVDLGVSFGDEEHLPGIDLIMPDI
CCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCH
RFLEKEKKNLVGIVLTHAHEDHFGAIIDLWPKLRCPIYATKFSASLFAAKLAAERTTLKI
HHHHHHHCCEEEEEEEECCCCCCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCEEEEE
PITVVPSGGRIDLGPFNVEFIPVAHSIPESHALAIRTSAGLVLHTGDWKIDPTPVVGPPT
EEEEECCCCEEECCCCCEEEEEEECCCCCCCEEEEEECCCEEEECCCCEECCCCCCCCCC
DEKRLRELGDEGVLALIGDSTNAVRDGHSPSETEVGASLTGLIKAAKGRVAVTTFASNVG
CHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCEEEEEEHHCHH
RMRAVADAAKAAGREVVLVGRAMDRVSQVARECGYFDGVQGFRGSEYYGHFPPDKVLALC
HHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHEEEEE
TGSQGEPRAALARIARDDHPDVTLNKGDCVIFSSRTIPGNEKAVGSIINGLVNQGIEVIT
ECCCCCHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEE
DRDHLVHVSGHPRREELRELISWVRPQLLIPVHGEALHLNEHAKLARQMGVPKVLTCRNG
CCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCEEECCHHHHHHHHCCCCEEEEECCC
DLIRLGPGDPAIIDQLPAGRLYKDGTILEEEKSRAVAERRKMAFAGCAFVALALTQAGEM
CEEEECCCCCHHHHCCCCCCEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VDDPEVELIGVPENNSAGEPLDDIVFDAVVATVEGLPKARRRDPDAVAESVRRTVRSTVQ
CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHH
AEWGKKPLCFVHVLKV
HHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]