Click here to switch to the map view.

The map label for this gene is ydiI [C]

Identifier: 86749627

GI number: 86749627

Start: 2868752

End: 2869234

Strand: Direct

Name: ydiI [C]

Synonym: RPB_2507

Alternate gene names: 86749627

Gene position: 2868752-2869234 (Clockwise)

Preceding gene: 86749626

Following gene: 86749628

Centisome position: 53.81

GC content: 66.67

Gene sequence:

>483_bases
ATGCATCCTGCCGCGGCAAGCTCAATGTGGACCAAAACAGAGCCCGCGCCGCCTTGGGGCGAGACTGCGGGCCGGGGAGG
GATGATGACGCCGCTCGACCTGATCAATTCGCGCCCGCTGCCGTTTGCGGCCTCGATGGGCATCGTCTTTGCCGAGGCCA
CACCGGACCGCGTGGTCGCAACCATGCTGGTGCGGCCGGATCTGTGCACGCTCGGCGATGCGATTCACGGCGGGGCGGTG
ATGGCGCTGGCGGATACGGTCGGCGCGGCGGCGACCTTCGTCAATCTGCCGGCTGACGCCAAGGGCACCACCACGTTGGA
GAGCAAGACCAATTTCATCGCTGCGGCGAAGGCCGGAACCACCGTGCGCGCCACGGCGACGCCGGTGCACCGGGGCCGGC
GGACTCAAGTCTGGCAGACCCGAATCGAGACCGAAGACGGGCGTCTCGTCGCCATGGTCACCCAAACGCAAATGGTCTTA
TAA

Upstream 100 bases:

>100_bases
CCAATCGACCAAGGCGACCGCCTTGTTCATCGCCGAATGGTGCGGGGTCGAGCCGGCCTAGCGCCATGACCTGACAGGTT
ATTGCCTGCGGCGGGACGCC

Downstream 100 bases:

>100_bases
TACCTCTATAAGGGGATTTCCGGTTCCGTAGAAACCCGGGAGTGCGGTGCAACAACACCGCTTGGCTGCGTCACTTTGCG
CTCGCTCAAGGTTTGTTAAG

Product: phenylacetic acid degradation-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MHPAAASSMWTKTEPAPPWGETAGRGGMMTPLDLINSRPLPFAASMGIVFAEATPDRVVATMLVRPDLCTLGDAIHGGAV
MALADTVGAAATFVNLPADAKGTTTLESKTNFIAAAKAGTTVRATATPVHRGRRTQVWQTRIETEDGRLVAMVTQTQMVL

Sequences:

>Translated_160_residues
MHPAAASSMWTKTEPAPPWGETAGRGGMMTPLDLINSRPLPFAASMGIVFAEATPDRVVATMLVRPDLCTLGDAIHGGAV
MALADTVGAAATFVNLPADAKGTTTLESKTNFIAAAKAGTTVRATATPVHRGRRTQVWQTRIETEDGRLVAMVTQTQMVL
>Mature_160_residues
MHPAAASSMWTKTEPAPPWGETAGRGGMMTPLDLINSRPLPFAASMGIVFAEATPDRVVATMLVRPDLCTLGDAIHGGAV
MALADTVGAAATFVNLPADAKGTTTLESKTNFIAAAKAGTTVRATATPVHRGRRTQVWQTRIETEDGRLVAMVTQTQMVL

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 16788; Mature: 16788

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPAAASSMWTKTEPAPPWGETAGRGGMMTPLDLINSRPLPFAASMGIVFAEATPDRVVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCEEEECCCCCCEEE
TMLVRPDLCTLGDAIHGGAVMALADTVGAAATFVNLPADAKGTTTLESKTNFIAAAKAGT
HHHCCCCHHHHCCCCCCCEEEEEHHHHCCCEEEEECCCCCCCCEEECCCCCEEEEECCCC
TVRATATPVHRGRRTQVWQTRIETEDGRLVAMVTQTQMVL
EEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCEECC
>Mature Secondary Structure
MHPAAASSMWTKTEPAPPWGETAGRGGMMTPLDLINSRPLPFAASMGIVFAEATPDRVVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCEEEECCCCCCEEE
TMLVRPDLCTLGDAIHGGAVMALADTVGAAATFVNLPADAKGTTTLESKTNFIAAAKAGT
HHHCCCCHHHHCCCCCCCEEEEEHHHHCCCEEEEECCCCCCCCEEECCCCCEEEEECCCC
TVRATATPVHRGRRTQVWQTRIETEDGRLVAMVTQTQMVL
EEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]