Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is surA [H]
Identifier: 86749597
GI number: 86749597
Start: 2833363
End: 2834292
Strand: Reverse
Name: surA [H]
Synonym: RPB_2477
Alternate gene names: 86749597
Gene position: 2834292-2833363 (Counterclockwise)
Preceding gene: 86749598
Following gene: 86749596
Centisome position: 53.16
GC content: 61.83
Gene sequence:
>930_bases ATGACGACCAAGTTCTCCTTTCGTATTTTCGCTGCGGCGCTGTGCTGCGCGGTCGCATCGTGGAGCGGTATCGGACTCGC CCGGGCGCAATCCGTCGCCGTGATGGTCAATGGCGAGCCGATCACCAATTTCGACATTGAGCAGCGCTCCAAACTCGACA AACTGTCGAACCAGTCCCGGACGCGTCAACAGGTTCTCGACGAACTGATCGACGAGAAAGTCAAAATCAGGGAAGGCAAG AAATTCGGCGTCAACCCGAGCGATTCGGACATCGACTCGTCGTTCGCGAGCATGAGTTCGCGGATGCGGATGTCGCCCGA TCAGATGGTGAAGATGCTCGCGGCCCAGGGCATTCGTCCGGGCACATTGAAGTCCAAGATCAAGGCCGAGATGGTCTGGA CCAGCCTGGTGCGCGGCCGCTTCAAGGACAGCTTGCTGGTCGGCGAAAAGGACATCCAGGCGCAGCTCGCCGCAAAGGGC GGCGACGACAAGTCCACGACCGAAAGCTTCGAATATCAGATGCGACCGGTGGTGCTGATCGTGTCGCGCGGCTCCGGCGC GGGCGCGGTGGAAGCGCGGCGCAAGGAAGCAGAAGCGCTGCGGAGCCGCGTCCAGAGCTGCGCGGACGCCGATCGTATCT TCAAGGCATTGCCGAACGCGGCGATCCGCGCGACGGTCGTCAAGACGTCGGCGGACCTGCCGCCGGCGCTGCGCGAGATT CTGGACAAGACCCCGGTCGGCCAGATGACTGCGCCGGAAGCAACCAAGCAAGGGGTCGAGATGGTCGCGCTGTGCTCGCG CAAGCCCACCACCGCCGACACGCCGATGAAGCGCGAAATCCGCGAGAAGATGTATGCGGAAAAATTTCAGGCCAAGTCGA AGGACTATTTGCGCGAGTCGCGCAATGCCGCGATGATCGAGTATCGCTAG
Upstream 100 bases:
>100_bases TCGGGCGCGTCGAGCGGCGTTTTCGGCCAATAGCGCCGAAACACATACGGGCAGCCCCCGTTTCTGATCAATCACATCGG CTGGGAGGCATCTGCGACCC
Downstream 100 bases:
>100_bases GACCTCGGCACAGGCGCCGCGCGAAGTCGCCCGGTACGGGCCGCAATCGGCGGCGGACAAAAAATGACCAGACCACTAGC GTTGTCGCTCGGCGAGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTTKFSFRIFAAALCCAVASWSGIGLARAQSVAVMVNGEPITNFDIEQRSKLDKLSNQSRTRQQVLDELIDEKVKIREGK KFGVNPSDSDIDSSFASMSSRMRMSPDQMVKMLAAQGIRPGTLKSKIKAEMVWTSLVRGRFKDSLLVGEKDIQAQLAAKG GDDKSTTESFEYQMRPVVLIVSRGSGAGAVEARRKEAEALRSRVQSCADADRIFKALPNAAIRATVVKTSADLPPALREI LDKTPVGQMTAPEATKQGVEMVALCSRKPTTADTPMKREIREKMYAEKFQAKSKDYLRESRNAAMIEYR
Sequences:
>Translated_309_residues MTTKFSFRIFAAALCCAVASWSGIGLARAQSVAVMVNGEPITNFDIEQRSKLDKLSNQSRTRQQVLDELIDEKVKIREGK KFGVNPSDSDIDSSFASMSSRMRMSPDQMVKMLAAQGIRPGTLKSKIKAEMVWTSLVRGRFKDSLLVGEKDIQAQLAAKG GDDKSTTESFEYQMRPVVLIVSRGSGAGAVEARRKEAEALRSRVQSCADADRIFKALPNAAIRATVVKTSADLPPALREI LDKTPVGQMTAPEATKQGVEMVALCSRKPTTADTPMKREIREKMYAEKFQAKSKDYLRESRNAAMIEYR >Mature_308_residues TTKFSFRIFAAALCCAVASWSGIGLARAQSVAVMVNGEPITNFDIEQRSKLDKLSNQSRTRQQVLDELIDEKVKIREGKK FGVNPSDSDIDSSFASMSSRMRMSPDQMVKMLAAQGIRPGTLKSKIKAEMVWTSLVRGRFKDSLLVGEKDIQAQLAAKGG DDKSTTESFEYQMRPVVLIVSRGSGAGAVEARRKEAEALRSRVQSCADADRIFKALPNAAIRATVVKTSADLPPALREIL DKTPVGQMTAPEATKQGVEMVALCSRKPTTADTPMKREIREKMYAEKFQAKSKDYLRESRNAAMIEYR
Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PpiC domains [H]
Homologues:
None
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000297 - InterPro: IPR023034 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 34139; Mature: 34008
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKFSFRIFAAALCCAVASWSGIGLARAQSVAVMVNGEPITNFDIEQRSKLDKLSNQSR CCCCHHHHHHHHHHHHHHHHCCCCCHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH TRQQVLDELIDEKVKIREGKKFGVNPSDSDIDSSFASMSSRMRMSPDQMVKMLAAQGIRP HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC GTLKSKIKAEMVWTSLVRGRFKDSLLVGEKDIQAQLAAKGGDDKSTTESFEYQMRPVVLI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHEECCEEEEE VSRGSGAGAVEARRKEAEALRSRVQSCADADRIFKALPNAAIRATVVKTSADLPPALREI EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCHHHHHH LDKTPVGQMTAPEATKQGVEMVALCSRKPTTADTPMKREIREKMYAEKFQAKSKDYLRES HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC RNAAMIEYR CCCEEEEEC >Mature Secondary Structure TTKFSFRIFAAALCCAVASWSGIGLARAQSVAVMVNGEPITNFDIEQRSKLDKLSNQSR CCCHHHHHHHHHHHHHHHHCCCCCHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH TRQQVLDELIDEKVKIREGKKFGVNPSDSDIDSSFASMSSRMRMSPDQMVKMLAAQGIRP HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC GTLKSKIKAEMVWTSLVRGRFKDSLLVGEKDIQAQLAAKGGDDKSTTESFEYQMRPVVLI CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHEECCEEEEE VSRGSGAGAVEARRKEAEALRSRVQSCADADRIFKALPNAAIRATVVKTSADLPPALREI EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCHHHHHH LDKTPVGQMTAPEATKQGVEMVALCSRKPTTADTPMKREIREKMYAEKFQAKSKDYLRES HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC RNAAMIEYR CCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA