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The map label for this gene is 86749559

Identifier: 86749559

GI number: 86749559

Start: 2794889

End: 2795989

Strand: Direct

Name: 86749559

Synonym: RPB_2439

Alternate gene names: NA

Gene position: 2794889-2795989 (Clockwise)

Preceding gene: 86749558

Following gene: 86749560

Centisome position: 52.42

GC content: 64.67

Gene sequence:

>1101_bases
ATGAGCGCCGATGAAGGGGGGCCGTCTCCGCAAAGCGTCGACGGGATTTTAGGCTCGTCAAAGATTGCGGTGGCGATCGA
GAACGACCGCTACAAGCACCTGCTCGACAATGTTCCGGTGGCCCTCGCGGTGTCGCGTGGCAACGGCGACGATCAGCGGA
TCGTCTATATCAATCACGCTTTCGAAGATCTGATGTCGCTGGCCCCGGCCGACATCGAGGGGCAGGGCTGGAACTGCCTC
GATGCGTTGATCAACGAAGACGATACGGCGCTGACGCTCGGCGCGGCGATCCGGGACGGCGAGGATTTCATCGGCGTGTT
CCGCCCCACCGTGCCGCCCGACCGGGTGCTGATCGTGCAGGCCTACGCCTCCGTGATCGAGAGCGACGACGGCGTCGAGA
ATTTCCGGATCGCGGCGTTGGTCGATGTCGGCGGACGCGAGCGGGCGCAGATCGAGCTGTTCGAGTCCCAGATCCGTGAA
CGCGACACCCTGATGCGCGAGCTGCAGCATAGGGTGAAGAACAATCTGCAATTGGTGACGGCGCTGGTGCGGCTCGAAGC
GCGTTCGGCGGCCGAAGGCGAGACCGTCGCGCTGACGCGGCTCGCAAGCCGGATCGATGCGTTGACCGCGCTGTACCGGA
TTTTGTCCGCAGAGAGTGCCGCCGGCAGCGATATCGATCTCGGCCAATATCTGTCGGATGTCACCGAGGCGGTGATGCAG
GCCCATGGCAGCGAGGGGATCGCCTACGACCTCAATGTCGGGTACTGCCCGCTCTCGGTCAATGTGGCGATGCCCGCCGG
CCTCCTGGTGAACGAGATGCTGACCAACGCGCTGAAATACGCCTTCGTCGGACGCCGCGGCGGCCGGATCAAGGTGATCT
GTAGCGTCGAGAACGGTCGCGTCTCGGTGATCGTCTCGGACGACGGCGCCGGCCTGCCGGAAGGCCAGGAATGGCCGTCG
CCGCGCAAGCTCGGCGCGCTGATCCTGCAGACCCTCAAGGAAAACGCCCGCAACGTTACGTTCCGGGCAGAGAGCATTCG
CGGGCAGGGCACGTTGTTCGCCCTCGGCTTCGAAGCGCCACCGGCTCCGGCGACGAATTGA

Upstream 100 bases:

>100_bases
GGCTAAGTGGTGGGCGTAGCCTGCGCGCGATGCACCGGCTTTTGCGTTGCGTTTCCCGTTTTGTTTCGCCATTCTCGGAT
GGGTGGGTAGGATTTGTTGA

Downstream 100 bases:

>100_bases
TCTTGGAGCGGGGCGCCCCGCCAGGCGGCGGCGGTCCCCGCATCCATGCTGTTTCGGCTTCGTACTGTTGGAAAATGACG
CAGATCGGCCTATTCAGGCC

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: EL346-LOV-histidine kinase; EL346-LOV-HK [H]

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MSADEGGPSPQSVDGILGSSKIAVAIENDRYKHLLDNVPVALAVSRGNGDDQRIVYINHAFEDLMSLAPADIEGQGWNCL
DALINEDDTALTLGAAIRDGEDFIGVFRPTVPPDRVLIVQAYASVIESDDGVENFRIAALVDVGGRERAQIELFESQIRE
RDTLMRELQHRVKNNLQLVTALVRLEARSAAEGETVALTRLASRIDALTALYRILSAESAAGSDIDLGQYLSDVTEAVMQ
AHGSEGIAYDLNVGYCPLSVNVAMPAGLLVNEMLTNALKYAFVGRRGGRIKVICSVENGRVSVIVSDDGAGLPEGQEWPS
PRKLGALILQTLKENARNVTFRAESIRGQGTLFALGFEAPPAPATN

Sequences:

>Translated_366_residues
MSADEGGPSPQSVDGILGSSKIAVAIENDRYKHLLDNVPVALAVSRGNGDDQRIVYINHAFEDLMSLAPADIEGQGWNCL
DALINEDDTALTLGAAIRDGEDFIGVFRPTVPPDRVLIVQAYASVIESDDGVENFRIAALVDVGGRERAQIELFESQIRE
RDTLMRELQHRVKNNLQLVTALVRLEARSAAEGETVALTRLASRIDALTALYRILSAESAAGSDIDLGQYLSDVTEAVMQ
AHGSEGIAYDLNVGYCPLSVNVAMPAGLLVNEMLTNALKYAFVGRRGGRIKVICSVENGRVSVIVSDDGAGLPEGQEWPS
PRKLGALILQTLKENARNVTFRAESIRGQGTLFALGFEAPPAPATN
>Mature_365_residues
SADEGGPSPQSVDGILGSSKIAVAIENDRYKHLLDNVPVALAVSRGNGDDQRIVYINHAFEDLMSLAPADIEGQGWNCLD
ALINEDDTALTLGAAIRDGEDFIGVFRPTVPPDRVLIVQAYASVIESDDGVENFRIAALVDVGGRERAQIELFESQIRER
DTLMRELQHRVKNNLQLVTALVRLEARSAAEGETVALTRLASRIDALTALYRILSAESAAGSDIDLGQYLSDVTEAVMQA
HGSEGIAYDLNVGYCPLSVNVAMPAGLLVNEMLTNALKYAFVGRRGGRIKVICSVENGRVSVIVSDDGAGLPEGQEWPSP
RKLGALILQTLKENARNVTFRAESIRGQGTLFALGFEAPPAPATN

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF02518 HATPase_c; PF07568 HisKA_2; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 39310; Mature: 39179

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADEGGPSPQSVDGILGSSKIAVAIENDRYKHLLDNVPVALAVSRGNGDDQRIVYINHA
CCCCCCCCCCCHHHHHCCCCEEEEEEECCHHHHHHHCCCEEEEEECCCCCCCEEEEEEHH
FEDLMSLAPADIEGQGWNCLDALINEDDTALTLGAAIRDGEDFIGVFRPTVPPDRVLIVQ
HHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEEHHHCCCCHHHEEECCCCCCCCEEEHH
AYASVIESDDGVENFRIAALVDVGGRERAQIELFESQIRERDTLMRELQHRVKNNLQLVT
HHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ALVRLEARSAAEGETVALTRLASRIDALTALYRILSAESAAGSDIDLGQYLSDVTEAVMQ
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
AHGSEGIAYDLNVGYCPLSVNVAMPAGLLVNEMLTNALKYAFVGRRGGRIKVICSVENGR
HCCCCCEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCE
VSVIVSDDGAGLPEGQEWPSPRKLGALILQTLKENARNVTFRAESIRGQGTLFALGFEAP
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCC
PAPATN
CCCCCC
>Mature Secondary Structure 
SADEGGPSPQSVDGILGSSKIAVAIENDRYKHLLDNVPVALAVSRGNGDDQRIVYINHA
CCCCCCCCCCHHHHHCCCCEEEEEEECCHHHHHHHCCCEEEEEECCCCCCCEEEEEEHH
FEDLMSLAPADIEGQGWNCLDALINEDDTALTLGAAIRDGEDFIGVFRPTVPPDRVLIVQ
HHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEEHHHCCCCHHHEEECCCCCCCCEEEHH
AYASVIESDDGVENFRIAALVDVGGRERAQIELFESQIRERDTLMRELQHRVKNNLQLVT
HHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ALVRLEARSAAEGETVALTRLASRIDALTALYRILSAESAAGSDIDLGQYLSDVTEAVMQ
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
AHGSEGIAYDLNVGYCPLSVNVAMPAGLLVNEMLTNALKYAFVGRRGGRIKVICSVENGR
HCCCCCEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCE
VSVIVSDDGAGLPEGQEWPSPRKLGALILQTLKENARNVTFRAESIRGQGTLFALGFEAP
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCC
PAPATN
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA