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The map label for this gene is virR [H]

Identifier: 86749523

GI number: 86749523

Start: 2757053

End: 2757514

Strand: Direct

Name: virR [H]

Synonym: RPB_2403

Alternate gene names: 86749523

Gene position: 2757053-2757514 (Clockwise)

Preceding gene: 86749522

Following gene: 86749529

Centisome position: 51.71

GC content: 68.18

Gene sequence:

>462_bases
ATGATTGCCACCGATGACATCCGCGAAGGTGAAGTCACCGTCACGCCGCCACCGCCGACCGACGCCGGTCTGGTGTTCAT
CGGCCGGATTCGCACGCCGTGGAGGTCGCGCGGCGAGACGCCGCGGCAGGGCAGTCCCGACGGTCCGGTGTGCCGGCTGG
AGATTTTCGAGCCGTGGACCGCGGCGCTCGCCGGCCTCGATAGGTTCACGCAGGTGCAGGTGGTCTATTGGCTGCACCAG
TCGCGCCGCGATCTGGTGATCCAGCGCGGCCACGGCATCGACGGCCCCCGCGGCACCTTTGCGTTGCGCTCGCCGGTGCG
GCCGAACCCGATCGGGATTTCGTCGGCGGCTCTGGTCGGGATCGAGGGATCGACGGTGCTGGTGCGCGGGCTCGATTGTC
TCGACGAAACGCCGCTGATCGACCTCAAGCCCGACCGCTGCGTGCATTCGATGGCGAAGTAA

Upstream 100 bases:

>100_bases
GCAATGGGCGCTCGGCTGAGTTCACCTTTTGCGGTGGTTGCCAGACGCCTCTATCCCGCTAGGCTGGAATCGATTTCGGC
ACAGACTCCGGGAAATCTCC

Downstream 100 bases:

>100_bases
CCAGACAAGGCCGTGATGGCCGGATGCTTGTTGTCTTGATTGAGCATGATCCCGAAAACCGGCATCCGCCTTTCGGGATC
ATGCTCTAATACGATTAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MIATDDIREGEVTVTPPPPTDAGLVFIGRIRTPWRSRGETPRQGSPDGPVCRLEIFEPWTAALAGLDRFTQVQVVYWLHQ
SRRDLVIQRGHGIDGPRGTFALRSPVRPNPIGISSAALVGIEGSTVLVRGLDCLDETPLIDLKPDRCVHSMAK

Sequences:

>Translated_153_residues
MIATDDIREGEVTVTPPPPTDAGLVFIGRIRTPWRSRGETPRQGSPDGPVCRLEIFEPWTAALAGLDRFTQVQVVYWLHQ
SRRDLVIQRGHGIDGPRGTFALRSPVRPNPIGISSAALVGIEGSTVLVRGLDCLDETPLIDLKPDRCVHSMAK
>Mature_153_residues
MIATDDIREGEVTVTPPPPTDAGLVFIGRIRTPWRSRGETPRQGSPDGPVCRLEIFEPWTAALAGLDRFTQVQVVYWLHQ
SRRDLVIQRGHGIDGPRGTFALRSPVRPNPIGISSAALVGIEGSTVLVRGLDCLDETPLIDLKPDRCVHSMAK

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Escherichia coli, GI1786393, Length=129, Percent_Identity=34.8837209302326, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 16757; Mature: 16757

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATDDIREGEVTVTPPPPTDAGLVFIGRIRTPWRSRGETPRQGSPDGPVCRLEIFEPWT
CCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCEEEEEEECCHH
AALAGLDRFTQVQVVYWLHQSRRDLVIQRGHGIDGPRGTFALRSPVRPNPIGISSAALVG
HHHHHHHHHHHEEHEEEECCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEEEE
IEGSTVLVRGLDCLDETPLIDLKPDRCVHSMAK
CCCCEEEEEECCCCCCCCEEECCCHHHHHHHCC
>Mature Secondary Structure
MIATDDIREGEVTVTPPPPTDAGLVFIGRIRTPWRSRGETPRQGSPDGPVCRLEIFEPWT
CCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCEEEEEEECCHH
AALAGLDRFTQVQVVYWLHQSRRDLVIQRGHGIDGPRGTFALRSPVRPNPIGISSAALVG
HHHHHHHHHHHEEHEEEECCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEEEE
IEGSTVLVRGLDCLDETPLIDLKPDRCVHSMAK
CCCCEEEEEECCCCCCCCEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA