Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86749522

Identifier: 86749522

GI number: 86749522

Start: 2756627

End: 2756971

Strand: Direct

Name: 86749522

Synonym: RPB_2402

Alternate gene names: NA

Gene position: 2756627-2756971 (Clockwise)

Preceding gene: 86749521

Following gene: 86749523

Centisome position: 51.7

GC content: 70.72

Gene sequence:

>345_bases
ATGACCGACTTCATCGGCGATTGGCAGGCGCTCGTGGTGCTGGTGCTCGCGGGTTTCCTGCCCAACGAGATCTGGCGCAT
GCTCGGGCTGTGGCTCGGCGGCGGCATCGACGAAGGCTCCGAGCTGCTGATCTGGGTGCGCGCGGTGGCGACCGCGATCC
TCGCCGGCGTGATCGCGCAGATTCTGGTGCTGCCGCCGGGCGCGCTGGCGGGTGTGCCGGCGCTGCTGCGCTACGGCGCG
GTGGGAATGGGGCTGCTGGTGTTTCTCGCGGCCGGCCGCTCGATCCTGTTCGGCGTGCTGGTCGGCGAGGCGGTGCTAAT
CGCCGGGCAATGGGCGCTCGGCTGA

Upstream 100 bases:

>100_bases
CGCTGGTGGCGATGTTTCACACCGGGGTCGACGTGCTGATCAGCGGCGTGGCGGCCGGTACCATCGCTTACGGCGTGCAT
CGCTTTCGGCGGAGACCGGC

Downstream 100 bases:

>100_bases
GTTCACCTTTTGCGGTGGTTGCCAGACGCCTCTATCCCGCTAGGCTGGAATCGATTTCGGCACAGACTCCGGGAAATCTC
CATGATTGCCACCGATGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MTDFIGDWQALVVLVLAGFLPNEIWRMLGLWLGGGIDEGSELLIWVRAVATAILAGVIAQILVLPPGALAGVPALLRYGA
VGMGLLVFLAAGRSILFGVLVGEAVLIAGQWALG

Sequences:

>Translated_114_residues
MTDFIGDWQALVVLVLAGFLPNEIWRMLGLWLGGGIDEGSELLIWVRAVATAILAGVIAQILVLPPGALAGVPALLRYGA
VGMGLLVFLAAGRSILFGVLVGEAVLIAGQWALG
>Mature_113_residues
TDFIGDWQALVVLVLAGFLPNEIWRMLGLWLGGGIDEGSELLIWVRAVATAILAGVIAQILVLPPGALAGVPALLRYGAV
GMGLLVFLAAGRSILFGVLVGEAVLIAGQWALG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11805; Mature: 11674

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFIGDWQALVVLVLAGFLPNEIWRMLGLWLGGGIDEGSELLIWVRAVATAILAGVIAQ
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ILVLPPGALAGVPALLRYGAVGMGLLVFLAAGRSILFGVLVGEAVLIAGQWALG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TDFIGDWQALVVLVLAGFLPNEIWRMLGLWLGGGIDEGSELLIWVRAVATAILAGVIAQ
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ILVLPPGALAGVPALLRYGAVGMGLLVFLAAGRSILFGVLVGEAVLIAGQWALG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA