Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749520
Identifier: 86749520
GI number: 86749520
Start: 2755386
End: 2755745
Strand: Reverse
Name: 86749520
Synonym: RPB_2400
Alternate gene names: NA
Gene position: 2755745-2755386 (Counterclockwise)
Preceding gene: 86749524
Following gene: 86749518
Centisome position: 51.69
GC content: 66.39
Gene sequence:
>360_bases ATGTTCGAACGGCGCAGCAGTTCACGACGACGGGTCTATTACGGCGGACGGCTCGCCTTCCAGGCCCGAACAGCAACGAT CGACTGTATCGTCCGCAATCTGTCGGCGGAGGGAGCCCAGATCGAGTTCGACAATCCGGCCGCCGTGCCGGACCGCGTGG ACCTGGTGATCGCGCGCAAGAGCATCGCTTATCGCGGCCGGATCGTCTGGCGGCGTGAAAACCGCGCCGGTCTTTGGCTG GACGCGCCGCGGCGACAACCCTCCGAGCTGCCGCTCGACCTCGCGCTGCGCATCCGGGCCACCGAGCGCGTCAACGTGCA ATTGCGCGCCAGGTTGGCGCAACTGCGGTCCGAATTCTGA
Upstream 100 bases:
>100_bases CCCGCTGCCCGTTTACCTTAACAATCGGTTGACCGTCAGTCGAATTCCGGCCTCGCCACTACCCCTGATAGCATCCCACA ACCAAAGCGAGGGGCTGACG
Downstream 100 bases:
>100_bases TCCGCACCGTGTTGCTCAGCCGCGATTGCGCAGCACCAGACAGGCGCTGCCGGCGCGGCGTATCCGGCTGCACAGATCGT TCGCTTCAGTGCGCGTCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MFERRSSSRRRVYYGGRLAFQARTATIDCIVRNLSAEGAQIEFDNPAAVPDRVDLVIARKSIAYRGRIVWRRENRAGLWL DAPRRQPSELPLDLALRIRATERVNVQLRARLAQLRSEF
Sequences:
>Translated_119_residues MFERRSSSRRRVYYGGRLAFQARTATIDCIVRNLSAEGAQIEFDNPAAVPDRVDLVIARKSIAYRGRIVWRRENRAGLWL DAPRRQPSELPLDLALRIRATERVNVQLRARLAQLRSEF >Mature_119_residues MFERRSSSRRRVYYGGRLAFQARTATIDCIVRNLSAEGAQIEFDNPAAVPDRVDLVIARKSIAYRGRIVWRRENRAGLWL DAPRRQPSELPLDLALRIRATERVNVQLRARLAQLRSEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13808; Mature: 13808
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFERRSSSRRRVYYGGRLAFQARTATIDCIVRNLSAEGAQIEFDNPAAVPDRVDLVIARK CCCCCCCCCCEEEECCEEEEEECCCEEEEEEECCCCCCCEEEECCCCCCCCCEEEEEEEC SIAYRGRIVWRRENRAGLWLDAPRRQPSELPLDLALRIRATERVNVQLRARLAQLRSEF CCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MFERRSSSRRRVYYGGRLAFQARTATIDCIVRNLSAEGAQIEFDNPAAVPDRVDLVIARK CCCCCCCCCCEEEECCEEEEEECCCEEEEEEECCCCCCCEEEECCCCCCCCCEEEEEEEC SIAYRGRIVWRRENRAGLWLDAPRRQPSELPLDLALRIRATERVNVQLRARLAQLRSEF CCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA