Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749512
Identifier: 86749512
GI number: 86749512
Start: 2743571
End: 2744305
Strand: Direct
Name: 86749512
Synonym: RPB_2392
Alternate gene names: NA
Gene position: 2743571-2744305 (Clockwise)
Preceding gene: 86749511
Following gene: 86749515
Centisome position: 51.46
GC content: 67.89
Gene sequence:
>735_bases ATGGCATCCATGACTCTGATCGTCGGCGTCGTCGCCGTTTTCGTTCTCTACATGCTGCTGCAGATGGTCCGGACGGCCAA CCCGGCCGTGCTGGCGCGCGCGATCAAGGTCGCCGGCGGCATCGTCACGCTCGCGGCGGCGCTGTTCACCGGCGTCAAGG GACAGCTGGCTGTGGCGATCCCGCTCGGCCTGTTCGGCGCCGGCCTGCTCGGCTGGGCGCCGATGGGCAATGCCGGCTTC GGCAGGCTCGGCGGCGTGTTCGGATCAGCGGGACGGCGCTCGCCCGGCCAGACCTCGCAGGTGCGATCGTCGGCGCTGGA GATGACGCTCGACCACGAGAGCGGTGCGATCAACGGCCGCATTCTGACCGGCGCCCATGCCGGCCGCTCGCTCGACGCGT TCGATCTTTCCGAACTCGCCGCGATGATGGCCGGCTTCGACGCCGAGAGCTGTGCGCTACTTGAAAGCTATCTGGACCGC CGGTTTCCCGCCTGGCGTCAGAACGCGCAGGGAGACGCGGCAGGGCGGCGTGGAAGCCAGCCGTCGGGCAGCAAAATGAC GACCGAGGAGGCCTATGAGATCCTTGGCCTGAAGCCGGGCGCGGGGCCGGACGACATCGGCCGCGCTCACCGCGCCCTGA TGAAGAAATTGCATCCCGACCAAGGGGGGTCGACGTACCTTGCCGCCCGTGTAAACGCGGCCAAGGATACTTTGCTTCGC ACGCATCGCAGCTGA
Upstream 100 bases:
>100_bases GACGCGTTGCTGCGGCTCGCCCGCGGGGGCGGGGGTGCGGCACTGCTGCTCGGGCAGATGAAATAGCCGCGGCGATGCTT TTTGCCGGCACCCATCCTAT
Downstream 100 bases:
>100_bases CTCCGGCAACGCAACTCAACGCTACAGACTGCGAGTGCTTCTCTGATCTCTGATTGACGCCGACTGCCCGCCCTTTCGGC GTGGCTGTTGTTTCCGTTTT
Product: heat shock protein DnaJ-like
Products: NA
Alternate protein names: Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain Protein; DNAJ Domain Protein; Heat Shock Protein DNAJ N-Terminal; Heat Shock Protein DNAJ; DNAJ-Class Molecular Chaperone; DNAJ Domain-Containing Protein; Heat Shock Protein DNAJ N-Terminal Domain Protein; Heat Shock Protein
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MASMTLIVGVVAVFVLYMLLQMVRTANPAVLARAIKVAGGIVTLAAALFTGVKGQLAVAIPLGLFGAGLLGWAPMGNAGF GRLGGVFGSAGRRSPGQTSQVRSSALEMTLDHESGAINGRILTGAHAGRSLDAFDLSELAAMMAGFDAESCALLESYLDR RFPAWRQNAQGDAAGRRGSQPSGSKMTTEEAYEILGLKPGAGPDDIGRAHRALMKKLHPDQGGSTYLAARVNAAKDTLLR THRS
Sequences:
>Translated_244_residues MASMTLIVGVVAVFVLYMLLQMVRTANPAVLARAIKVAGGIVTLAAALFTGVKGQLAVAIPLGLFGAGLLGWAPMGNAGF GRLGGVFGSAGRRSPGQTSQVRSSALEMTLDHESGAINGRILTGAHAGRSLDAFDLSELAAMMAGFDAESCALLESYLDR RFPAWRQNAQGDAAGRRGSQPSGSKMTTEEAYEILGLKPGAGPDDIGRAHRALMKKLHPDQGGSTYLAARVNAAKDTLLR THRS >Mature_243_residues ASMTLIVGVVAVFVLYMLLQMVRTANPAVLARAIKVAGGIVTLAAALFTGVKGQLAVAIPLGLFGAGLLGWAPMGNAGFG RLGGVFGSAGRRSPGQTSQVRSSALEMTLDHESGAINGRILTGAHAGRSLDAFDLSELAAMMAGFDAESCALLESYLDRR FPAWRQNAQGDAAGRRGSQPSGSKMTTEEAYEILGLKPGAGPDDIGRAHRALMKKLHPDQGGSTYLAARVNAAKDTLLRT HRS
Specific function: Unknown
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25392; Mature: 25260
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASMTLIVGVVAVFVLYMLLQMVRTANPAVLARAIKVAGGIVTLAAALFTGVKGQLAVAI CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE PLGLFGAGLLGWAPMGNAGFGRLGGVFGSAGRRSPGQTSQVRSSALEMTLDHESGAINGR HHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCE ILTGAHAGRSLDAFDLSELAAMMAGFDAESCALLESYLDRRFPAWRQNAQGDAAGRRGSQ EEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCC PSGSKMTTEEAYEILGLKPGAGPDDIGRAHRALMKKLHPDQGGSTYLAARVNAAKDTLLR CCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHH THRS HCCC >Mature Secondary Structure ASMTLIVGVVAVFVLYMLLQMVRTANPAVLARAIKVAGGIVTLAAALFTGVKGQLAVAI CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE PLGLFGAGLLGWAPMGNAGFGRLGGVFGSAGRRSPGQTSQVRSSALEMTLDHESGAINGR HHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCE ILTGAHAGRSLDAFDLSELAAMMAGFDAESCALLESYLDRRFPAWRQNAQGDAAGRRGSQ EEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCC PSGSKMTTEEAYEILGLKPGAGPDDIGRAHRALMKKLHPDQGGSTYLAARVNAAKDTLLR CCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHH THRS HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA