Definition | Rhodopseudomonas palustris HaA2, complete genome. |
---|---|
Accession | NC_007778 |
Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is envZ [H]
Identifier: 86749493
GI number: 86749493
Start: 2727053
End: 2728423
Strand: Reverse
Name: envZ [H]
Synonym: RPB_2373
Alternate gene names: 86749493
Gene position: 2728423-2727053 (Counterclockwise)
Preceding gene: 86749494
Following gene: 86749491
Centisome position: 51.17
GC content: 70.82
Gene sequence:
>1371_bases ATGAGCCGCCGCAGGCCGCGCAGCCTTCTCACCCAGGTGGCGCTGCTCAGCTTCGCAGCGCTCCTCGTCGCCCAGTTCGT CAGTTTCTGGCTGTTCACAGCCGACCACGCCAAGCGGATTCGCGTCGCCCAGCGCATCGAGGTGGTCGAACGCGTCGCCG CCGTCGCCGCATTGCTGGACAAGGCCCCGGCGACGGCGCGCGACGACCTGCTCGAAGCGGCCAGTTCACGCTCGACACGG TTCGAGGTGGCCACGGCACCGACCGTCGATCGGCCCGTCGACCTGCTCGGGTCCGATTGCGGCCAGCGCGATTGCGCCGA TCTCGGCTTGCCCGCGGGACTGCGGATGCAAGAGGACTTCGTTTCGCCGCGTGATGGCGGCCGGTTCAGCGATCCGCCAC CCCGGTTCCGCGATCGGCTCGTGAAATCCAACCTGGCACCGGTCGCGTTCAAGCTGTCGCTGCCGCTGCGCGACGCGCAG TGGCTCAACGTCACCTCGCGCTTCGAGCGGCCGGCCATTCAACTGCCCCCGCAGGTGATGGGCACCACGCTGGTTTCGCT GGCGCTGGTGCTGGCGGCGCTGTGGTTCGCGCTGCGGCGCGTCACCCGGCCGCTCGATCAGCTCGCCTCGGCGGCCGACG GGTTCGGCCTCGACGCCCCGCCTCCCCGGATGCCGACCGGCGGACCGCGCGAAGTCCGTGCGCTGTCGGATGCGCTGGCG CGGATGCACGAGCGGCTGGCGCGGATGCTGGGAGAGCGCACGAGGATGCTGGCGGCGCTCGGCCACGATCTGCGCTCGCC GATCACCGCGCTGCGCGTCCGCGCCGAAATGGTCGACGACGCCGAGAACAAGGAGCGGATGATCGCGACGCTCGACGAGA TGCAGCAGATGGTGGAAGCCACGCTGGCCTTCGCCCGCGGCGTCTCGACCGACCAGCCGACCGAACCTGTCGACCTCGCC GCGCTGGCGTCGGAGCTGGCCGCCGAGCTGAGCGCGATCGGACCACCGATCCGGATCACGTCGGCAACCCCGATCGTGCT GCCGCTGCGGCGCGTGCCGCTGCGGCGCGCGCTGCGCAACATCCTGGAAAACGCCCAGCGCTATGGCGGCGGCGCCGAGG TTCGGGTCGAGCAAGACGGCACCGAAGTCCGAATGGTGATCGAGGATCGCGGCCCCGGTCTGCCGGACAGTGACCTCACG CGGGTGTTCGAACCGTTCGTCAGGCTGGAGACCTCACGGTCGCGGGAAACCGGCGGCACCGGTCTCGGCCTGCCGATCGC GCGCGCCATTCTGCAGGCGCACGGCGCCACCATCGCCTTGGCCAACCGGCCCGAAGGCGGTCTGCGCGCGACGGTGACGT TCGCAGGATAG
Upstream 100 bases:
>100_bases GGCTGCGTCGCAAGATCGAGGACGATCCGGCGCATCCGAAGATCATCACCACGGTTCGCTCCGGCGGCTACAGCCTCGCC GCCGACGTCCGGGAGCTGCC
Downstream 100 bases:
>100_bases GTCGGCGGCGACTCGGTGAGGATGGGTGGACGACACGCGCCGGCTGGGCTGCTTTCCCGCCAATTCGCGGGAGGCCGGAC CGTGCATGTTCGAAGAGAAT
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MSRRRPRSLLTQVALLSFAALLVAQFVSFWLFTADHAKRIRVAQRIEVVERVAAVAALLDKAPATARDDLLEAASSRSTR FEVATAPTVDRPVDLLGSDCGQRDCADLGLPAGLRMQEDFVSPRDGGRFSDPPPRFRDRLVKSNLAPVAFKLSLPLRDAQ WLNVTSRFERPAIQLPPQVMGTTLVSLALVLAALWFALRRVTRPLDQLASAADGFGLDAPPPRMPTGGPREVRALSDALA RMHERLARMLGERTRMLAALGHDLRSPITALRVRAEMVDDAENKERMIATLDEMQQMVEATLAFARGVSTDQPTEPVDLA ALASELAAELSAIGPPIRITSATPIVLPLRRVPLRRALRNILENAQRYGGGAEVRVEQDGTEVRMVIEDRGPGLPDSDLT RVFEPFVRLETSRSRETGGTGLGLPIARAILQAHGATIALANRPEGGLRATVTFAG
Sequences:
>Translated_456_residues MSRRRPRSLLTQVALLSFAALLVAQFVSFWLFTADHAKRIRVAQRIEVVERVAAVAALLDKAPATARDDLLEAASSRSTR FEVATAPTVDRPVDLLGSDCGQRDCADLGLPAGLRMQEDFVSPRDGGRFSDPPPRFRDRLVKSNLAPVAFKLSLPLRDAQ WLNVTSRFERPAIQLPPQVMGTTLVSLALVLAALWFALRRVTRPLDQLASAADGFGLDAPPPRMPTGGPREVRALSDALA RMHERLARMLGERTRMLAALGHDLRSPITALRVRAEMVDDAENKERMIATLDEMQQMVEATLAFARGVSTDQPTEPVDLA ALASELAAELSAIGPPIRITSATPIVLPLRRVPLRRALRNILENAQRYGGGAEVRVEQDGTEVRMVIEDRGPGLPDSDLT RVFEPFVRLETSRSRETGGTGLGLPIARAILQAHGATIALANRPEGGLRATVTFAG >Mature_455_residues SRRRPRSLLTQVALLSFAALLVAQFVSFWLFTADHAKRIRVAQRIEVVERVAAVAALLDKAPATARDDLLEAASSRSTRF EVATAPTVDRPVDLLGSDCGQRDCADLGLPAGLRMQEDFVSPRDGGRFSDPPPRFRDRLVKSNLAPVAFKLSLPLRDAQW LNVTSRFERPAIQLPPQVMGTTLVSLALVLAALWFALRRVTRPLDQLASAADGFGLDAPPPRMPTGGPREVRALSDALAR MHERLARMLGERTRMLAALGHDLRSPITALRVRAEMVDDAENKERMIATLDEMQQMVEATLAFARGVSTDQPTEPVDLAA LASELAAELSAIGPPIRITSATPIVLPLRRVPLRRALRNILENAQRYGGGAEVRVEQDGTEVRMVIEDRGPGLPDSDLTR VFEPFVRLETSRSRETGGTGLGLPIARAILQAHGATIALANRPEGGLRATVTFAG
Specific function: Member of the two-component regulatory system envZ/ompR involved in the regulation of osmoregulation (genes ompF and ompC). EnvZ functions as a membrane-associated protein kinase that phosphorylates ompR in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789808, Length=273, Percent_Identity=31.5018315018315, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1787894, Length=300, Percent_Identity=28, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1790551, Length=286, Percent_Identity=30.4195804195804, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790346, Length=237, Percent_Identity=29.957805907173, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1788393, Length=241, Percent_Identity=29.045643153527, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786912, Length=245, Percent_Identity=33.0612244897959, Blast_Score=92, Evalue=9e-20, Organism=Escherichia coli, GI1786783, Length=298, Percent_Identity=26.1744966442953, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1789403, Length=293, Percent_Identity=28.3276450511945, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI87081816, Length=327, Percent_Identity=28.1345565749235, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1790861, Length=287, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87082128, Length=223, Percent_Identity=26.9058295964126, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1786600, Length=221, Percent_Identity=25.7918552036199, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI145693157, Length=235, Percent_Identity=21.7021276595745, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788549, Length=227, Percent_Identity=28.1938325991189, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI48994928, Length=235, Percent_Identity=23.4042553191489, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49630; Mature: 49499
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRRPRSLLTQVALLSFAALLVAQFVSFWLFTADHAKRIRVAQRIEVVERVAAVAALLD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAPATARDDLLEAASSRSTRFEVATAPTVDRPVDLLGSDCGQRDCADLGLPAGLRMQEDF CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHCCCCCCCCCHHHC VSPRDGGRFSDPPPRFRDRLVKSNLAPVAFKLSLPLRDAQWLNVTSRFERPAIQLPPQVM CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHH GTTLVSLALVLAALWFALRRVTRPLDQLASAADGFGLDAPPPRMPTGGPREVRALSDALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH RMHERLARMLGERTRMLAALGHDLRSPITALRVRAEMVDDAENKERMIATLDEMQQMVEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TLAFARGVSTDQPTEPVDLAALASELAAELSAIGPPIRITSATPIVLPLRRVPLRRALRN HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH ILENAQRYGGGAEVRVEQDGTEVRMVIEDRGPGLPDSDLTRVFEPFVRLETSRSRETGGT HHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC GLGLPIARAILQAHGATIALANRPEGGLRATVTFAG CCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECC >Mature Secondary Structure SRRRPRSLLTQVALLSFAALLVAQFVSFWLFTADHAKRIRVAQRIEVVERVAAVAALLD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAPATARDDLLEAASSRSTRFEVATAPTVDRPVDLLGSDCGQRDCADLGLPAGLRMQEDF CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHCCCCCCCCCHHHC VSPRDGGRFSDPPPRFRDRLVKSNLAPVAFKLSLPLRDAQWLNVTSRFERPAIQLPPQVM CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHH GTTLVSLALVLAALWFALRRVTRPLDQLASAADGFGLDAPPPRMPTGGPREVRALSDALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH RMHERLARMLGERTRMLAALGHDLRSPITALRVRAEMVDDAENKERMIATLDEMQQMVEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TLAFARGVSTDQPTEPVDLAALASELAAELSAIGPPIRITSATPIVLPLRRVPLRRALRN HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH ILENAQRYGGGAEVRVEQDGTEVRMVIEDRGPGLPDSDLTRVFEPFVRLETSRSRETGGT HHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC GLGLPIARAILQAHGATIALANRPEGGLRATVTFAG CCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6292200; 2997120; 9278503; 8132603; 2277041; 2824492; 1323560; 9817206; 10426948 [H]