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The map label for this gene is ynfA [C]

Identifier: 86749490

GI number: 86749490

Start: 2725367

End: 2725690

Strand: Reverse

Name: ynfA [C]

Synonym: RPB_2370

Alternate gene names: 86749490

Gene position: 2725690-2725367 (Counterclockwise)

Preceding gene: 86749491

Following gene: 86749484

Centisome position: 51.12

GC content: 70.68

Gene sequence:

>324_bases
TTGAACACAGCGATCATCTATGTCGGCGCGGCGATCGCCGAGATTGCCGGCTGCTTCGCGTTCTGGGGCTGGCTGCGGCT
CGGCAAGCCGGTGTGGTGGCTGGCGCCCGGGCTGCTCTCCCTCGCGCTGTTCGCCTATCTGCTGACGCTGGTGGAGAGCG
AGGCTGCCGGCCGCGCCTATGCGGCCTATGGCGGCATCTACATCGTCGCGTCGCTGGCCTGGCTGTGGAGCGTCGAGGGC
GTGCGTCCGGACCGCTGGGACGTCAGCGGCGCCTGCGTCTGCCTCGCCGGCGCGGCGATCATCCTGTGGGGCCCGCGCGG
ATAG

Upstream 100 bases:

>100_bases
CCGACATCGCGCTGCGCGCGGCCTTCACCGAGATCTTCGGCGCGACCGTGGATGCGCCGCAAGTCGATCCGGCTGTCGAT
GCGGGCGCGAGGTCGCCGGC

Downstream 100 bases:

>100_bases
AGCATGACGCGGCGCTGCAGCGCCGACTCACATCACACCGTCGCCAGGATCGAAAACCGCTCGCCGGGATTCCGCTGATC
GAGCGCGTCCGGTCCCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MNTAIIYVGAAIAEIAGCFAFWGWLRLGKPVWWLAPGLLSLALFAYLLTLVESEAAGRAYAAYGGIYIVASLAWLWSVEG
VRPDRWDVSGACVCLAGAAIILWGPRG

Sequences:

>Translated_107_residues
MNTAIIYVGAAIAEIAGCFAFWGWLRLGKPVWWLAPGLLSLALFAYLLTLVESEAAGRAYAAYGGIYIVASLAWLWSVEG
VRPDRWDVSGACVCLAGAAIILWGPRG
>Mature_107_residues
MNTAIIYVGAAIAEIAGCFAFWGWLRLGKPVWWLAPGLLSLALFAYLLTLVESEAAGRAYAAYGGIYIVASLAWLWSVEG
VRPDRWDVSGACVCLAGAAIILWGPRG

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=104, Percent_Identity=44.2307692307692, Blast_Score=83, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2370_RHOP2 (Q2IXI5)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_485986.1
- STRING:   Q2IXI5
- GeneID:   3909369
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_2370
- eggNOG:   COG1742
- HOGENOM:   HBG313568
- OMA:   WWLAPGL
- ProtClustDB:   CLSK753782
- BioCyc:   RPAL316058:RPB_2370-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11448; Mature: 11448

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1dc68240)-; HASH(0x1dc6bb70)-; HASH(0x1be7b6e0)-; HASH(0x1cd32ed8)-;

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAIIYVGAAIAEIAGCFAFWGWLRLGKPVWWLAPGLLSLALFAYLLTLVESEAAGRAY
CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AAYGGIYIVASLAWLWSVEGVRPDRWDVSGACVCLAGAAIILWGPRG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEECCCH
>Mature Secondary Structure
MNTAIIYVGAAIAEIAGCFAFWGWLRLGKPVWWLAPGLLSLALFAYLLTLVESEAAGRAY
CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AAYGGIYIVASLAWLWSVEGVRPDRWDVSGACVCLAGAAIILWGPRG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEECCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA