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The map label for this gene is 86749452

Identifier: 86749452

GI number: 86749452

Start: 2680336

End: 2680758

Strand: Reverse

Name: 86749452

Synonym: RPB_2332

Alternate gene names: NA

Gene position: 2680758-2680336 (Counterclockwise)

Preceding gene: 86749453

Following gene: 86749448

Centisome position: 50.28

GC content: 65.48

Gene sequence:

>423_bases
ATGATCCTGCTGGACACCAACGTCGTCTCGGAAGCGATCAAACCCGGACCTCACCCGTCGGTTCTCGCCTGGCTCGACGT
TCAGGCGGCCGAGACCTTGTTTCTGTCCAGCATCACCGTGGCCGAACTTCTCTTCGGCGTCGGCGCGATGCCGGACGGCA
AGCGAAAGAACTTGCTGGCGGTTCGGATCGACGGCTTGCTGGACCAGTTCGACCGCCGTGTCCTGCACTTCGATATCCCT
GCGGCGCGGTGCTATGCCGATCTCGCCGTCAAGGCACGCGCGGTCGGAAAGGGCTTCCCCACGCCCGACGGCTATATCGC
CGCGATCGCCGCCGCACACGGCTTTAGTGTCGCGTCGCGCGACGCGAGTGCGTTCGACGCGGCCGGCCTGACCGTGATCG
ATCCCTGGACGGCGAGCGACTGA

Upstream 100 bases:

>100_bases
TCTCACCAATGCCGATATCGAAGCGCTCGAACAGGTCCGCGACACGCGTCCGGCCGAGCCGATGAAGTTTGAATGACCTG
ACGCGGAATTGGTGCCTCGA

Downstream 100 bases:

>100_bases
GACGCAGCCCGTAGGGCGGATTAGCGAAGCGTCATCCGCCAATTCGGTCACCGCAATTCGGTCGAAGCCTCACAATGGCG
GGTTACGCCTTCGGCTAACC

Product: PilT protein-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MILLDTNVVSEAIKPGPHPSVLAWLDVQAAETLFLSSITVAELLFGVGAMPDGKRKNLLAVRIDGLLDQFDRRVLHFDIP
AARCYADLAVKARAVGKGFPTPDGYIAAIAAAHGFSVASRDASAFDAAGLTVIDPWTASD

Sequences:

>Translated_140_residues
MILLDTNVVSEAIKPGPHPSVLAWLDVQAAETLFLSSITVAELLFGVGAMPDGKRKNLLAVRIDGLLDQFDRRVLHFDIP
AARCYADLAVKARAVGKGFPTPDGYIAAIAAAHGFSVASRDASAFDAAGLTVIDPWTASD
>Mature_140_residues
MILLDTNVVSEAIKPGPHPSVLAWLDVQAAETLFLSSITVAELLFGVGAMPDGKRKNLLAVRIDGLLDQFDRRVLHFDIP
AARCYADLAVKARAVGKGFPTPDGYIAAIAAAHGFSVASRDASAFDAAGLTVIDPWTASD

Specific function: Involved in plasmid stability (Potential) [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14775; Mature: 14775

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLDTNVVSEAIKPGPHPSVLAWLDVQAAETLFLSSITVAELLFGVGAMPDGKRKNLLA
CEEECCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
VRIDGLLDQFDRRVLHFDIPAARCYADLAVKARAVGKGFPTPDGYIAAIAAAHGFSVASR
EEEHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
DASAFDAAGLTVIDPWTASD
CCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MILLDTNVVSEAIKPGPHPSVLAWLDVQAAETLFLSSITVAELLFGVGAMPDGKRKNLLA
CEEECCHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
VRIDGLLDQFDRRVLHFDIPAARCYADLAVKARAVGKGFPTPDGYIAAIAAAHGFSVASR
EEEHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
DASAFDAAGLTVIDPWTASD
CCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]