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The map label for this gene is yrkC [H]

Identifier: 86749448

GI number: 86749448

Start: 2676675

End: 2677178

Strand: Reverse

Name: yrkC [H]

Synonym: RPB_2328

Alternate gene names: 86749448

Gene position: 2677178-2676675 (Counterclockwise)

Preceding gene: 86749452

Following gene: 86749447

Centisome position: 50.21

GC content: 65.48

Gene sequence:

>504_bases
GTGAGCACCATTGCCGACACCATTCCCGTCGCAAGCCAACACCTCATCCACGACATCGGGCCGCAGCCGCAATCCTTCGA
CATCGAAGGCGCGACCAAGGACAATATCAATTACCGCACCGTCGCCTGGAGCGGGCGCTATCTGCAATTGACTCTGATGT
CGATTCCGCCCGGCGGCGACATCGGCCTCGAAGCCCATCCGGAGACGGATCAGTTCCTGCGCCTCGACGCGGGCAATGGC
CGGGTGCAGATGGGCGCCACAAAGGACAGGCTCAGTTTCGAACGGGACGTGTCGGACGGCTGGTGCGTGCTCGTCCCGGC
GGGGACCTGGCACAACGTCACCAACACCGGGACGACGCCGATGCAGCTCTATACGATCTACGCACCCGCCCACCACGCGC
CCGGCAAGGTGCAGGCGACGGCGGCGGCGGCCAAGGCCGACACCCACGACGAACCGGCGGCATGGTCGGTGCAGCCGCCG
AAACATCCGTCGGACAAGCACTGA

Upstream 100 bases:

>100_bases
ACGCCGGCGTGTCGCACCGGAACTGTTTCGATCAGCATGACTTGCCCATGTTCAACCGGATGCGAGACGGACCCTCGCAG
CATATTCGAGGAGACACGTC

Downstream 100 bases:

>100_bases
GGGAGCCTCATCTAAGCGGGCGGGCTCGGCGGACGATCTCAGCCGAATGTCGCGGCTTTGCGGCACGCCCGCGTCGATGT
AGGCTCCCGCCGTCCACCGC

Product: cupin region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSTIADTIPVASQHLIHDIGPQPQSFDIEGATKDNINYRTVAWSGRYLQLTLMSIPPGGDIGLEAHPETDQFLRLDAGNG
RVQMGATKDRLSFERDVSDGWCVLVPAGTWHNVTNTGTTPMQLYTIYAPAHHAPGKVQATAAAAKADTHDEPAAWSVQPP
KHPSDKH

Sequences:

>Translated_167_residues
MSTIADTIPVASQHLIHDIGPQPQSFDIEGATKDNINYRTVAWSGRYLQLTLMSIPPGGDIGLEAHPETDQFLRLDAGNG
RVQMGATKDRLSFERDVSDGWCVLVPAGTWHNVTNTGTTPMQLYTIYAPAHHAPGKVQATAAAAKADTHDEPAAWSVQPP
KHPSDKH
>Mature_166_residues
STIADTIPVASQHLIHDIGPQPQSFDIEGATKDNINYRTVAWSGRYLQLTLMSIPPGGDIGLEAHPETDQFLRLDAGNGR
VQMGATKDRLSFERDVSDGWCVLVPAGTWHNVTNTGTTPMQLYTIYAPAHHAPGKVQATAAAAKADTHDEPAAWSVQPPK
HPSDKH

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 18085; Mature: 17954

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIADTIPVASQHLIHDIGPQPQSFDIEGATKDNINYRTVAWSGRYLQLTLMSIPPGGD
CCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEECCCEEEEEEEECCCCCC
IGLEAHPETDQFLRLDAGNGRVQMGATKDRLSFERDVSDGWCVLVPAGTWHNVTNTGTTP
CCEEECCCCCEEEEEECCCCEEEECCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCC
MQLYTIYAPAHHAPGKVQATAAAAKADTHDEPAAWSVQPPKHPSDKH
EEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
STIADTIPVASQHLIHDIGPQPQSFDIEGATKDNINYRTVAWSGRYLQLTLMSIPPGGD
CCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEECCCEEEEEEEECCCCCC
IGLEAHPETDQFLRLDAGNGRVQMGATKDRLSFERDVSDGWCVLVPAGTWHNVTNTGTTP
CCEEECCCCCEEEEEECCCCEEEECCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCC
MQLYTIYAPAHHAPGKVQATAAAAKADTHDEPAAWSVQPPKHPSDKH
EEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]