Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86749371

Identifier: 86749371

GI number: 86749371

Start: 2598322

End: 2598729

Strand: Reverse

Name: 86749371

Synonym: RPB_2251

Alternate gene names: NA

Gene position: 2598729-2598322 (Counterclockwise)

Preceding gene: 86749373

Following gene: 86749368

Centisome position: 48.74

GC content: 64.22

Gene sequence:

>408_bases
ATGAAGCGCTACGCGGTCGTCTACCTCGCCACTCTCGTCGTGCTGTTGCCGCTGGATTTTCTGTTTCTCGGCAGCGTCGG
CAAGAAGATGTTCGAGCAGCACATTGGCGACCTGATGTTGAGCAGCCCTCGCGTCGCTCCGGCGATCGCGTTCTATCTGC
TCTTCGCCGCCGGGATCGTCATCTTCGTCAACGGCGCCGCGCCCGGCGACTGGCAGCACAACGCGCTCTACGGCGCGCTG
TTCGGCCTGGTCTGCTACGCGACCTACGAACTCACCAACATGGCCATCCTGCGGCAATGGGACTGGTCGATGGTGTTCAC
CGATATCGCCTGGGGCGCAACGCTCACCGCGCTCGCAGGCGCGCTGGGCGGCCTGCTCGCGCAGTGGACGCTGTCCAAGG
TGGGATGA

Upstream 100 bases:

>100_bases
CGCCACGACTGTTCGTTCCGGCTGTCAGACGCCCCCGGTTTCCCTGGGGAACCGAGCCGCACCACCGCCGTTGAGCCCGG
AACCTTCACCGGAGATCGAT

Downstream 100 bases:

>100_bases
CGGCGCGCGGCGCCCTAGGCGGCGCGTACCGTTCCGAGGAACCGCTCGACTTCGAGCTTGAGACGGTTGCTGTCGCCGGA
GAGCGATTGTGCGGCGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKRYAVVYLATLVVLLPLDFLFLGSVGKKMFEQHIGDLMLSSPRVAPAIAFYLLFAAGIVIFVNGAAPGDWQHNALYGAL
FGLVCYATYELTNMAILRQWDWSMVFTDIAWGATLTALAGALGGLLAQWTLSKVG

Sequences:

>Translated_135_residues
MKRYAVVYLATLVVLLPLDFLFLGSVGKKMFEQHIGDLMLSSPRVAPAIAFYLLFAAGIVIFVNGAAPGDWQHNALYGAL
FGLVCYATYELTNMAILRQWDWSMVFTDIAWGATLTALAGALGGLLAQWTLSKVG
>Mature_135_residues
MKRYAVVYLATLVVLLPLDFLFLGSVGKKMFEQHIGDLMLSSPRVAPAIAFYLLFAAGIVIFVNGAAPGDWQHNALYGAL
FGLVCYATYELTNMAILRQWDWSMVFTDIAWGATLTALAGALGGLLAQWTLSKVG

Specific function: Unknown

COG id: COG4852

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14692; Mature: 14692

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYAVVYLATLVVLLPLDFLFLGSVGKKMFEQHIGDLMLSSPRVAPAIAFYLLFAAGIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IFVNGAAPGDWQHNALYGALFGLVCYATYELTNMAILRQWDWSMVFTDIAWGATLTALAG
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ALGGLLAQWTLSKVG
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRYAVVYLATLVVLLPLDFLFLGSVGKKMFEQHIGDLMLSSPRVAPAIAFYLLFAAGIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IFVNGAAPGDWQHNALYGALFGLVCYATYELTNMAILRQWDWSMVFTDIAWGATLTALAG
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ALGGLLAQWTLSKVG
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA