| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749224
Identifier: 86749224
GI number: 86749224
Start: 2391761
End: 2392645
Strand: Reverse
Name: 86749224
Synonym: RPB_2103
Alternate gene names: NA
Gene position: 2392645-2391761 (Counterclockwise)
Preceding gene: 86749229
Following gene: 86749216
Centisome position: 44.88
GC content: 70.06
Gene sequence:
>885_bases ATGACGACGCACCACAAGACGTTCCTCGCGCCGCCGTCCTTGCCGGCGATGGGCCTCGGCGCTTTGTGGCCGTCGTCCGG CTGGCACGCCGAGCAGGGCTTCCCCGAATTCAGCTTCATCTGGCGCGACTACCGCATCAGCCGACAGGCGCTCGACGTGC TGCAGCGCCTCGCCGGGCGCAACGACGACGTCACCACCGAGCGGCTGCTGCTGCTGGCGCCGCACGTCACCGGATTCCGC CTGACGCTGGCGATGCTGATGCATCCGCGCTGGCCGATCCCGATCTGGCGCGCACTACAATTGCGCAACCGGATGATCCG TCATGGCGACGTCAAGGTCGCGTTCCCGTCCGACCTGATCGCGCGGGCGATCGCCTGGCGCGTCCATGGCAAAGGCATCG AACTGGACGTCCACGCCCGATTGCTGCAGGGCGCCGATTGCCCCTGGGAAAGCATCACCACGTTCTATTATCGCGGCCGC TTCACGCCGCTGTTTTCGCGCGGCGCAGCGGATGGTGCGCCGTCCGCGTCGCCCGTGGTCGATCCCGCGCTGCCGCCGGT CGCGCATTGGACGGTCGAGGGCGGCCAGCGGCTGCGCTTCACGCGGCTCACCGGCGATACCAATCCGCTGCATCTGCTCG ACGCCTATGCGCGCCGGGCCGGCTTCGCCGCGGCCTCCGCGCATCCGCAGCGGATCGCCGCGCAATGCCTCGGGCACCTC GCGCCGACACAGGCGCCGCCGCGCCAGCTCGATCTGTGGCTGAAAGGCCCGGTGTATTACGGCCGCGCCGTCACGCTGCG GCAGGCCGCGGGCGACGACGGCGACGATTTCGCGCTGTGGGTCGACGGCGACGAACGGCCGGCGATGGTGGGCGTGATGC GTTGA
Upstream 100 bases:
>100_bases GTTCCGCGACACGGAATCGCGTGCGGACATTGACCGCGACGGCGGATGTCTGCATTGAGCGGTCCGGCCCCCGCGCGACC ACACCGCCAGAGACCGCCAG
Downstream 100 bases:
>100_bases TCCTGTTACTCCAGAGTGACTCCCGTCCGCAGCCGTCATCCTGAGGTGCGAGCGTAGCGAGCCTCGAAGGATGCGGTGAC AGGGACTGCGGCTCATCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Dehydratase; MaoC Domain Protein Dehydratase; Maoc Domain Protein Dehydratase; MaoC-Like Dehydratase
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTTHHKTFLAPPSLPAMGLGALWPSSGWHAEQGFPEFSFIWRDYRISRQALDVLQRLAGRNDDVTTERLLLLAPHVTGFR LTLAMLMHPRWPIPIWRALQLRNRMIRHGDVKVAFPSDLIARAIAWRVHGKGIELDVHARLLQGADCPWESITTFYYRGR FTPLFSRGAADGAPSASPVVDPALPPVAHWTVEGGQRLRFTRLTGDTNPLHLLDAYARRAGFAAASAHPQRIAAQCLGHL APTQAPPRQLDLWLKGPVYYGRAVTLRQAAGDDGDDFALWVDGDERPAMVGVMR
Sequences:
>Translated_294_residues MTTHHKTFLAPPSLPAMGLGALWPSSGWHAEQGFPEFSFIWRDYRISRQALDVLQRLAGRNDDVTTERLLLLAPHVTGFR LTLAMLMHPRWPIPIWRALQLRNRMIRHGDVKVAFPSDLIARAIAWRVHGKGIELDVHARLLQGADCPWESITTFYYRGR FTPLFSRGAADGAPSASPVVDPALPPVAHWTVEGGQRLRFTRLTGDTNPLHLLDAYARRAGFAAASAHPQRIAAQCLGHL APTQAPPRQLDLWLKGPVYYGRAVTLRQAAGDDGDDFALWVDGDERPAMVGVMR >Mature_293_residues TTHHKTFLAPPSLPAMGLGALWPSSGWHAEQGFPEFSFIWRDYRISRQALDVLQRLAGRNDDVTTERLLLLAPHVTGFRL TLAMLMHPRWPIPIWRALQLRNRMIRHGDVKVAFPSDLIARAIAWRVHGKGIELDVHARLLQGADCPWESITTFYYRGRF TPLFSRGAADGAPSASPVVDPALPPVAHWTVEGGQRLRFTRLTGDTNPLHLLDAYARRAGFAAASAHPQRIAAQCLGHLA PTQAPPRQLDLWLKGPVYYGRAVTLRQAAGDDGDDFALWVDGDERPAMVGVMR
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32751; Mature: 32620
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHHKTFLAPPSLPAMGLGALWPSSGWHAEQGFPEFSFIWRDYRISRQALDVLQRLAGR CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC NDDVTTERLLLLAPHVTGFRLTLAMLMHPRWPIPIWRALQLRNRMIRHGDVKVAFPSDLI CCCCCHHEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHH ARAIAWRVHGKGIELDVHARLLQGADCPWESITTFYYRGRFTPLFSRGAADGAPSASPVV HHHHHHEECCCCEEEEHHHHHHCCCCCCHHHHHEEEECCCCCHHHHCCCCCCCCCCCCCC DPALPPVAHWTVEGGQRLRFTRLTGDTNPLHLLDAYARRAGFAAASAHPQRIAAQCLGHL CCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC APTQAPPRQLDLWLKGPVYYGRAVTLRQAAGDDGDDFALWVDGDERPAMVGVMR CCCCCCCCCEEEEEECCEEECCEEEEEHHCCCCCCCEEEEECCCCCCCEEEECC >Mature Secondary Structure TTHHKTFLAPPSLPAMGLGALWPSSGWHAEQGFPEFSFIWRDYRISRQALDVLQRLAGR CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC NDDVTTERLLLLAPHVTGFRLTLAMLMHPRWPIPIWRALQLRNRMIRHGDVKVAFPSDLI CCCCCHHEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHH ARAIAWRVHGKGIELDVHARLLQGADCPWESITTFYYRGRFTPLFSRGAADGAPSASPVV HHHHHHEECCCCEEEEHHHHHHCCCCCCHHHHHEEEECCCCCHHHHCCCCCCCCCCCCCC DPALPPVAHWTVEGGQRLRFTRLTGDTNPLHLLDAYARRAGFAAASAHPQRIAAQCLGHL CCCCCCCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC APTQAPPRQLDLWLKGPVYYGRAVTLRQAAGDDGDDFALWVDGDERPAMVGVMR CCCCCCCCCEEEEEECCEEECCEEEEEHHCCCCCCCEEEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA