Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749154
Identifier: 86749154
GI number: 86749154
Start: 2311158
End: 2311682
Strand: Reverse
Name: 86749154
Synonym: RPB_2031
Alternate gene names: NA
Gene position: 2311682-2311158 (Counterclockwise)
Preceding gene: 86749165
Following gene: 86749153
Centisome position: 43.36
GC content: 65.33
Gene sequence:
>525_bases ATGGCCACCGATCACATCCGATACGACGTCCTCGCGCGCGAAGCCTTGCGCGGCGTGCTGCGGCAGGTCCTGACCGACGT CGCTCAGCACGGCCTGCCCGGCGAGCACCACTTCTTCATCACCTTCCTGTCCAAGGCCGATGGCGTGAAGCTGTCGCCAC GGCTGCTGGCGCAATATCCGGAGGAGATGACCGTCATCCTCCAGCATCAATTCTGGGATCTGGTGGTGACCGAGGATCGT TTCGAGGTCGGGCTGTCGTTCGGCGGCATTCCGGAGCGGCTGGTGGTGCCGTTTTCGTCGATCAAGAGCTTCTTCGATCC GTCGGTGCAGTTCGGCCTGCAATTCGAAGCCGGTGACGGCGCCGCTGAAGCTGCCGACACCGACGCCCCGGAGATCGCCC CCCCGGCTCCGAGCCCGGCTTTGCCCGCCGCGGCCGATTCCGGGCCTGCCGAAATTGCCGCCGACGAGGCGGTCAAATCC GAAGGCGCCGAAGTGGTGCGGCTCGATCGCTTCCGCAAGAAATAG
Upstream 100 bases:
>100_bases CGGTCGGCGCGAGTCGGGCCCTGATGCCGATGGTGATCAGTGTCGAAACGTCCGGCGACGGGACCAGCGAGCACAGCACG AGGCGGGCACAGGACAGGTC
Downstream 100 bases:
>100_bases GGTTTCGCGCAGCCGTCGCGCCCCCTCCGCCGGCCGCGGCGCGGCCTGCGGGGTTCTTTACGATTCCCCCGCTGACCGAC AGGACGACCGCGATGGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MATDHIRYDVLAREALRGVLRQVLTDVAQHGLPGEHHFFITFLSKADGVKLSPRLLAQYPEEMTVILQHQFWDLVVTEDR FEVGLSFGGIPERLVVPFSSIKSFFDPSVQFGLQFEAGDGAAEAADTDAPEIAPPAPSPALPAAADSGPAEIAADEAVKS EGAEVVRLDRFRKK
Sequences:
>Translated_174_residues MATDHIRYDVLAREALRGVLRQVLTDVAQHGLPGEHHFFITFLSKADGVKLSPRLLAQYPEEMTVILQHQFWDLVVTEDR FEVGLSFGGIPERLVVPFSSIKSFFDPSVQFGLQFEAGDGAAEAADTDAPEIAPPAPSPALPAAADSGPAEIAADEAVKS EGAEVVRLDRFRKK >Mature_173_residues ATDHIRYDVLAREALRGVLRQVLTDVAQHGLPGEHHFFITFLSKADGVKLSPRLLAQYPEEMTVILQHQFWDLVVTEDRF EVGLSFGGIPERLVVPFSSIKSFFDPSVQFGLQFEAGDGAAEAADTDAPEIAPPAPSPALPAAADSGPAEIAADEAVKSE GAEVVRLDRFRKK
Specific function: Unknown
COG id: COG3814
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18926; Mature: 18794
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDHIRYDVLAREALRGVLRQVLTDVAQHGLPGEHHFFITFLSKADGVKLSPRLLAQYP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECHHHHHHCC EEMTVILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFSSIKSFFDPSVQFGLQFEAGDG HHHHHHHHHHHEEEEEECCHHEECCCCCCCCHHEECCHHHHHHHCCCCEEEEEEEECCCC AAEAADTDAPEIAPPAPSPALPAAADSGPAEIAADEAVKSEGAEVVRLDRFRKK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHCC >Mature Secondary Structure ATDHIRYDVLAREALRGVLRQVLTDVAQHGLPGEHHFFITFLSKADGVKLSPRLLAQYP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECHHHHHHCC EEMTVILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFSSIKSFFDPSVQFGLQFEAGDG HHHHHHHHHHHEEEEEECCHHEECCCCCCCCHHEECCHHHHHHHCCCCEEEEEEEECCCC AAEAADTDAPEIAPPAPSPALPAAADSGPAEIAADEAVKSEGAEVVRLDRFRKK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA