Click here to switch to the map view.

The map label for this gene is 86749148

Identifier: 86749148

GI number: 86749148

Start: 2302903

End: 2303436

Strand: Reverse

Name: 86749148

Synonym: RPB_2025

Alternate gene names: NA

Gene position: 2303436-2302903 (Counterclockwise)

Preceding gene: 86749151

Following gene: 86749146

Centisome position: 43.2

GC content: 64.61

Gene sequence:

>534_bases
TTGACTTTGGAAGCAGATCGCAACGTCGACGCCGGCAGCATCGCCGCGCCGTTCGTCACCACCGTGATGCAGATCGAACC
GGCCTGGATCGACTACAACGGCCACCTCAACATGGCCTACTACAATGTGCTGTTCGATCGCTCGATCGATCAGATGTGGC
TCGAACTGGGGATTGGTCCGGACTATCTGAAAACCCGCGGCGGCTCGACCTTCACGGCGGAGTGCCACGTGCGCTATCTG
CGCGAGGTGCATCTCGGCGACCCGGTGCGGGTGCACGTCTACCTGATCGCAGCGGACGAAAAACGCATTCACACCTTCGA
GGAACTGCGCCACGCCGAGGAAGGCTGGCTGTCGGCGACGTCCGAGAACATGACGATGCATGTCGACATGGGCGTCCGCA
AAGTCGCGCCGTTTCCGCCCGACATCCGCGCCCGGATCGAGCGCGTCGCCGAGGCGCATCGCGCGGCGCCGCGGCCCGAG
GGCATCGGACGAAGCATCGCAATGCCCTCGAAGCGCGCGGAGCCGGTGCGCTAG

Upstream 100 bases:

>100_bases
GCGCGCTTCGGCGTGTTGGTGATGGTCAGGCCCACGATAAAAATCCTCCGGATCGGATCGACCGTGGCAAAGGATACCGG
AGGGGTCAAGGGAGGAGCAT

Downstream 100 bases:

>100_bases
ACTCGCGTGCGGCCGCGAACCAGGCCGACCACCGCGGAGACTAGGAAAAGCACGATCGCGATGAAGAAGATCACCTTGGC
GATTTCGATCGAGGCGCCGG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily Protein; Thioesterase-Like Protein; 3-Hydroxyacyl-CoA Dehydrogenase C-Terminal Domain Family; Thioesterase Family Protein; 3-Hydroxyacyl-CoA Dehydrogenase Protein; Thioesterase-Like; 3-Hydroxybutyryl-CoA Dehydrogenase; 3-Hydroxyacyl-CoA Dehydrogenase; Lipolytic G-D-S-L; Thioesterase FcbC-Like; 4-Hydroxybenzoyl-CoA Thioesterase

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTLEADRNVDAGSIAAPFVTTVMQIEPAWIDYNGHLNMAYYNVLFDRSIDQMWLELGIGPDYLKTRGGSTFTAECHVRYL
REVHLGDPVRVHVYLIAADEKRIHTFEELRHAEEGWLSATSENMTMHVDMGVRKVAPFPPDIRARIERVAEAHRAAPRPE
GIGRSIAMPSKRAEPVR

Sequences:

>Translated_177_residues
MTLEADRNVDAGSIAAPFVTTVMQIEPAWIDYNGHLNMAYYNVLFDRSIDQMWLELGIGPDYLKTRGGSTFTAECHVRYL
REVHLGDPVRVHVYLIAADEKRIHTFEELRHAEEGWLSATSENMTMHVDMGVRKVAPFPPDIRARIERVAEAHRAAPRPE
GIGRSIAMPSKRAEPVR
>Mature_176_residues
TLEADRNVDAGSIAAPFVTTVMQIEPAWIDYNGHLNMAYYNVLFDRSIDQMWLELGIGPDYLKTRGGSTFTAECHVRYLR
EVHLGDPVRVHVYLIAADEKRIHTFEELRHAEEGWLSATSENMTMHVDMGVRKVAPFPPDIRARIERVAEAHRAAPRPEG
IGRSIAMPSKRAEPVR

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20067; Mature: 19936

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEADRNVDAGSIAAPFVTTVMQIEPAWIDYNGHLNMAYYNVLFDRSIDQMWLELGIGP
CCCCCCCCCCCCCHHHHHHHHHHEECCEEEEECCEEEEEEEEEHHHCCHHHHHHHHCCCH
DYLKTRGGSTFTAECHVRYLREVHLGDPVRVHVYLIAADEKRIHTFEELRHAEEGWLSAT
HHHHCCCCCEEEHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCEEC
SENMTMHVDMGVRKVAPFPPDIRARIERVAEAHRAAPRPEGIGRSIAMPSKRAEPVR
CCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLEADRNVDAGSIAAPFVTTVMQIEPAWIDYNGHLNMAYYNVLFDRSIDQMWLELGIGP
CCCCCCCCCCCCHHHHHHHHHHEECCEEEEECCEEEEEEEEEHHHCCHHHHHHHHCCCH
DYLKTRGGSTFTAECHVRYLREVHLGDPVRVHVYLIAADEKRIHTFEELRHAEEGWLSAT
HHHHCCCCCEEEHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCEEC
SENMTMHVDMGVRKVAPFPPDIRARIERVAEAHRAAPRPEGIGRSIAMPSKRAEPVR
CCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA