| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749145
Identifier: 86749145
GI number: 86749145
Start: 2299575
End: 2299868
Strand: Reverse
Name: 86749145
Synonym: RPB_2022
Alternate gene names: NA
Gene position: 2299868-2299575 (Counterclockwise)
Preceding gene: 86749146
Following gene: 86749144
Centisome position: 43.14
GC content: 63.61
Gene sequence:
>294_bases ATGGTTCACTACGTCGCCTTGATCCACCAGGACGCTGACGGCAGCTACAGCGTGTCGTTTCCCGATATCCCCGGGGTCGT CACCGCCGGCGAGACGCTGGAAGAGGCGAAGGAAGAAGCCGCCGAGGTGCTCGTCTTCGCGGCCGAGGATTGGACCAACC CGGATGGCTCGACCGTGTTCAATCCGCCACGCACGATCGACGAGTTGCGCAAAGACCCCGCCTTCGTCGAAGACAGCAAG GACGCAATCGTCGCCCTGATCGAATACCCCGCCCGTGCCCACGCGGCGGAATAG
Upstream 100 bases:
>100_bases AAGTGACGAAAATCGACGGCAACAAGCTCACCATCGCCTTCGACAAGGCCGGCGAAAAGAAGGTGGTCGATAGTTTCGTG CAGCGGGTGTAGAGGCCACG
Downstream 100 bases:
>100_bases ATGCTTCGGAGAGGATATCACTTTCGACAAAGCCGCTTGGTTTGCGCGATGCCAAAAATTTTCTTGGGGATTCGTCGGTT GACGTGCTCTGCATGGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MVHYVALIHQDADGSYSVSFPDIPGVVTAGETLEEAKEEAAEVLVFAAEDWTNPDGSTVFNPPRTIDELRKDPAFVEDSK DAIVALIEYPARAHAAE
Sequences:
>Translated_97_residues MVHYVALIHQDADGSYSVSFPDIPGVVTAGETLEEAKEEAAEVLVFAAEDWTNPDGSTVFNPPRTIDELRKDPAFVEDSK DAIVALIEYPARAHAAE >Mature_97_residues MVHYVALIHQDADGSYSVSFPDIPGVVTAGETLEEAKEEAAEVLVFAAEDWTNPDGSTVFNPPRTIDELRKDPAFVEDSK DAIVALIEYPARAHAAE
Specific function: Unknown
COG id: COG1598
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10529; Mature: 10529
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHYVALIHQDADGSYSVSFPDIPGVVTAGETLEEAKEEAAEVLVFAAEDWTNPDGSTVF CEEEEEEEEECCCCCEEEECCCCCCEEECCHHHHHHHHHHHHEEEECCCCCCCCCCCEEE NPPRTIDELRKDPAFVEDSKDAIVALIEYPARAHAAE CCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MVHYVALIHQDADGSYSVSFPDIPGVVTAGETLEEAKEEAAEVLVFAAEDWTNPDGSTVF CEEEEEEEEECCCCCEEEECCCCCCEEECCHHHHHHHHHHHHEEEECCCCCCCCCCCEEE NPPRTIDELRKDPAFVEDSKDAIVALIEYPARAHAAE CCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA