Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86749139

Identifier: 86749139

GI number: 86749139

Start: 2295672

End: 2296433

Strand: Reverse

Name: 86749139

Synonym: RPB_2016

Alternate gene names: NA

Gene position: 2296433-2295672 (Counterclockwise)

Preceding gene: 86749141

Following gene: 86749137

Centisome position: 43.07

GC content: 68.37

Gene sequence:

>762_bases
ATGCGTTCGTATCTCGTTTCCCTCGCCGGCCTGATCCTGCTGGCGACCGCCGGCACCGCGCAGGCGAAAGTCGCGATCAC
CGTCGACAAGGACAATCAGCAAATGACCGTCGCGGTCGATGGCGTCGAGCGCTATCGCTGGCCGGTCTCGACCGGAAACC
CGTCGCACGAAACGCCGAACGGATCGTTCCAAACCTTCCGGATGGAGCCCGATCATTATTCGAAGGAGTTCGACGATGCG
CCGATGCCGCACGCGATCTTCTTCACCAAGCGCGGCCACGCCATCCACGGCACCGACGCCGCCGGCAAGCTCGGCGTGCC
GGTGTCGCACGGCTGCGTGCGACTGTCGCGCGAGAACGCGTCGAAGCTCTATGCGCTGGTCGAGAAGGACGGCGTGCTCA
ACACCACCGTCACCCTCACCGGATCGTCGCGCGTGGCGCTGGCGCGGCAGCCGGCCAACCGGACGGCCACCGCGGCGGCG
CGCCGCGCTCCGGCGCCGGTCTATGACAGCGCCGGCGAGCCGGTCGAACTGGCGCCGCGCGCGCAGCCACGTGTGGTCGC
GCCGCAGGTCGTGGACGACGGCTACATCTATCCGGCCGACGGCAGCGACAGCCGCCGCTACCCGGCTCCTCCCGGCTATC
GCCGCGGCTACGCCCAGCCGCAGTATCAGCACTCGGATGAAGACGCCTACGCGGCCCAGGTCTATCAACCGCAGCGCTAC
TACCAGCCGCGCGGCTATTACGGCGGCTACTCGGCGTATTGA

Upstream 100 bases:

>100_bases
TGCGGCGCGGCCGGCACTGGAAACTGCGCGGGCCACTATGCATATTACCGTCGGGGACGGGGCGTGAAGTCGAAGGATCG
GGCCGAGGAGGCCGTCAAGC

Downstream 100 bases:

>100_bases
GCCGATGTGACGCGCGCTGTGTCGGTCAGCTCCTCGTCTACTCGTCGCCTTCCCGCAGCCGGCGCCACACGGCGCCGAGG
ACGTTGGAATAGTCGTCGGT

Product: ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MRSYLVSLAGLILLATAGTAQAKVAITVDKDNQQMTVAVDGVERYRWPVSTGNPSHETPNGSFQTFRMEPDHYSKEFDDA
PMPHAIFFTKRGHAIHGTDAAGKLGVPVSHGCVRLSRENASKLYALVEKDGVLNTTVTLTGSSRVALARQPANRTATAAA
RRAPAPVYDSAGEPVELAPRAQPRVVAPQVVDDGYIYPADGSDSRRYPAPPGYRRGYAQPQYQHSDEDAYAAQVYQPQRY
YQPRGYYGGYSAY

Sequences:

>Translated_253_residues
MRSYLVSLAGLILLATAGTAQAKVAITVDKDNQQMTVAVDGVERYRWPVSTGNPSHETPNGSFQTFRMEPDHYSKEFDDA
PMPHAIFFTKRGHAIHGTDAAGKLGVPVSHGCVRLSRENASKLYALVEKDGVLNTTVTLTGSSRVALARQPANRTATAAA
RRAPAPVYDSAGEPVELAPRAQPRVVAPQVVDDGYIYPADGSDSRRYPAPPGYRRGYAQPQYQHSDEDAYAAQVYQPQRY
YQPRGYYGGYSAY
>Mature_253_residues
MRSYLVSLAGLILLATAGTAQAKVAITVDKDNQQMTVAVDGVERYRWPVSTGNPSHETPNGSFQTFRMEPDHYSKEFDDA
PMPHAIFFTKRGHAIHGTDAAGKLGVPVSHGCVRLSRENASKLYALVEKDGVLNTTVTLTGSSRVALARQPANRTATAAA
RRAPAPVYDSAGEPVELAPRAQPRVVAPQVVDDGYIYPADGSDSRRYPAPPGYRRGYAQPQYQHSDEDAYAAQVYQPQRY
YQPRGYYGGYSAY

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27642; Mature: 27642

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSYLVSLAGLILLATAGTAQAKVAITVDKDNQQMTVAVDGVERYRWPVSTGNPSHETPN
CHHHHHHHHHHHHEECCCCCEEEEEEEEECCCCEEEEEEECHHHEECCCCCCCCCCCCCC
GSFQTFRMEPDHYSKEFDDAPMPHAIFFTKRGHAIHGTDAAGKLGVPVSHGCVRLSRENA
CCEEEEEECCHHHCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCEEEECCCCC
SKLYALVEKDGVLNTTVTLTGSSRVALARQPANRTATAAARRAPAPVYDSAGEPVELAPR
CEEEEEEECCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCEEECCC
AQPRVVAPQVVDDGYIYPADGSDSRRYPAPPGYRRGYAQPQYQHSDEDAYAAQVYQPQRY
CCCCEECCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHH
YQPRGYYGGYSAY
CCCCCCCCCCCCC
>Mature Secondary Structure
MRSYLVSLAGLILLATAGTAQAKVAITVDKDNQQMTVAVDGVERYRWPVSTGNPSHETPN
CHHHHHHHHHHHHEECCCCCEEEEEEEEECCCCEEEEEEECHHHEECCCCCCCCCCCCCC
GSFQTFRMEPDHYSKEFDDAPMPHAIFFTKRGHAIHGTDAAGKLGVPVSHGCVRLSRENA
CCEEEEEECCHHHCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCEEEECCCCC
SKLYALVEKDGVLNTTVTLTGSSRVALARQPANRTATAAARRAPAPVYDSAGEPVELAPR
CEEEEEEECCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCEEECCC
AQPRVVAPQVVDDGYIYPADGSDSRRYPAPPGYRRGYAQPQYQHSDEDAYAAQVYQPQRY
CCCCEECCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHH
YQPRGYYGGYSAY
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA