| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749139
Identifier: 86749139
GI number: 86749139
Start: 2295672
End: 2296433
Strand: Reverse
Name: 86749139
Synonym: RPB_2016
Alternate gene names: NA
Gene position: 2296433-2295672 (Counterclockwise)
Preceding gene: 86749141
Following gene: 86749137
Centisome position: 43.07
GC content: 68.37
Gene sequence:
>762_bases ATGCGTTCGTATCTCGTTTCCCTCGCCGGCCTGATCCTGCTGGCGACCGCCGGCACCGCGCAGGCGAAAGTCGCGATCAC CGTCGACAAGGACAATCAGCAAATGACCGTCGCGGTCGATGGCGTCGAGCGCTATCGCTGGCCGGTCTCGACCGGAAACC CGTCGCACGAAACGCCGAACGGATCGTTCCAAACCTTCCGGATGGAGCCCGATCATTATTCGAAGGAGTTCGACGATGCG CCGATGCCGCACGCGATCTTCTTCACCAAGCGCGGCCACGCCATCCACGGCACCGACGCCGCCGGCAAGCTCGGCGTGCC GGTGTCGCACGGCTGCGTGCGACTGTCGCGCGAGAACGCGTCGAAGCTCTATGCGCTGGTCGAGAAGGACGGCGTGCTCA ACACCACCGTCACCCTCACCGGATCGTCGCGCGTGGCGCTGGCGCGGCAGCCGGCCAACCGGACGGCCACCGCGGCGGCG CGCCGCGCTCCGGCGCCGGTCTATGACAGCGCCGGCGAGCCGGTCGAACTGGCGCCGCGCGCGCAGCCACGTGTGGTCGC GCCGCAGGTCGTGGACGACGGCTACATCTATCCGGCCGACGGCAGCGACAGCCGCCGCTACCCGGCTCCTCCCGGCTATC GCCGCGGCTACGCCCAGCCGCAGTATCAGCACTCGGATGAAGACGCCTACGCGGCCCAGGTCTATCAACCGCAGCGCTAC TACCAGCCGCGCGGCTATTACGGCGGCTACTCGGCGTATTGA
Upstream 100 bases:
>100_bases TGCGGCGCGGCCGGCACTGGAAACTGCGCGGGCCACTATGCATATTACCGTCGGGGACGGGGCGTGAAGTCGAAGGATCG GGCCGAGGAGGCCGTCAAGC
Downstream 100 bases:
>100_bases GCCGATGTGACGCGCGCTGTGTCGGTCAGCTCCTCGTCTACTCGTCGCCTTCCCGCAGCCGGCGCCACACGGCGCCGAGG ACGTTGGAATAGTCGTCGGT
Product: ErfK/YbiS/YcfS/YnhG
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MRSYLVSLAGLILLATAGTAQAKVAITVDKDNQQMTVAVDGVERYRWPVSTGNPSHETPNGSFQTFRMEPDHYSKEFDDA PMPHAIFFTKRGHAIHGTDAAGKLGVPVSHGCVRLSRENASKLYALVEKDGVLNTTVTLTGSSRVALARQPANRTATAAA RRAPAPVYDSAGEPVELAPRAQPRVVAPQVVDDGYIYPADGSDSRRYPAPPGYRRGYAQPQYQHSDEDAYAAQVYQPQRY YQPRGYYGGYSAY
Sequences:
>Translated_253_residues MRSYLVSLAGLILLATAGTAQAKVAITVDKDNQQMTVAVDGVERYRWPVSTGNPSHETPNGSFQTFRMEPDHYSKEFDDA PMPHAIFFTKRGHAIHGTDAAGKLGVPVSHGCVRLSRENASKLYALVEKDGVLNTTVTLTGSSRVALARQPANRTATAAA RRAPAPVYDSAGEPVELAPRAQPRVVAPQVVDDGYIYPADGSDSRRYPAPPGYRRGYAQPQYQHSDEDAYAAQVYQPQRY YQPRGYYGGYSAY >Mature_253_residues MRSYLVSLAGLILLATAGTAQAKVAITVDKDNQQMTVAVDGVERYRWPVSTGNPSHETPNGSFQTFRMEPDHYSKEFDDA PMPHAIFFTKRGHAIHGTDAAGKLGVPVSHGCVRLSRENASKLYALVEKDGVLNTTVTLTGSSRVALARQPANRTATAAA RRAPAPVYDSAGEPVELAPRAQPRVVAPQVVDDGYIYPADGSDSRRYPAPPGYRRGYAQPQYQHSDEDAYAAQVYQPQRY YQPRGYYGGYSAY
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27642; Mature: 27642
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSYLVSLAGLILLATAGTAQAKVAITVDKDNQQMTVAVDGVERYRWPVSTGNPSHETPN CHHHHHHHHHHHHEECCCCCEEEEEEEEECCCCEEEEEEECHHHEECCCCCCCCCCCCCC GSFQTFRMEPDHYSKEFDDAPMPHAIFFTKRGHAIHGTDAAGKLGVPVSHGCVRLSRENA CCEEEEEECCHHHCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCEEEECCCCC SKLYALVEKDGVLNTTVTLTGSSRVALARQPANRTATAAARRAPAPVYDSAGEPVELAPR CEEEEEEECCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCEEECCC AQPRVVAPQVVDDGYIYPADGSDSRRYPAPPGYRRGYAQPQYQHSDEDAYAAQVYQPQRY CCCCEECCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHH YQPRGYYGGYSAY CCCCCCCCCCCCC >Mature Secondary Structure MRSYLVSLAGLILLATAGTAQAKVAITVDKDNQQMTVAVDGVERYRWPVSTGNPSHETPN CHHHHHHHHHHHHEECCCCCEEEEEEEEECCCCEEEEEEECHHHEECCCCCCCCCCCCCC GSFQTFRMEPDHYSKEFDDAPMPHAIFFTKRGHAIHGTDAAGKLGVPVSHGCVRLSRENA CCEEEEEECCHHHCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCEEEECCCCC SKLYALVEKDGVLNTTVTLTGSSRVALARQPANRTATAAARRAPAPVYDSAGEPVELAPR CEEEEEEECCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCEEECCC AQPRVVAPQVVDDGYIYPADGSDSRRYPAPPGYRRGYAQPQYQHSDEDAYAAQVYQPQRY CCCCEECCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHH YQPRGYYGGYSAY CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA