Definition | Rhodopseudomonas palustris HaA2, complete genome. |
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Accession | NC_007778 |
Length | 5,331,656 |
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The map label for this gene is 86749074
Identifier: 86749074
GI number: 86749074
Start: 2217326
End: 2217838
Strand: Direct
Name: 86749074
Synonym: RPB_1951
Alternate gene names: NA
Gene position: 2217326-2217838 (Clockwise)
Preceding gene: 86749072
Following gene: 86749075
Centisome position: 41.59
GC content: 71.73
Gene sequence:
>513_bases ATGATCGCGCGTCGTCGTCTGTTTGGCTTGGCTGTCGCGCTGCCGGCGCTGGTCGCGGCGGCGCTGGCGCCGTCGTCCCC GGTGCGCGCCGGGGACGGGCTGGAGCCGTACGCGCCGCTTCTGGTCGAACTGCCGGGCTGGAAAGCCGGCAGGCTCGGCG GCATGGCGATGCAGGACGGCGGCAGCCGGATTGTGGTGGTGCAGCGCGGCTACGCGCGCGGCGAGATCCATGTCAGCGTC CAGTTGCTCGCCGGCGCGCCGGCGCAGAGCCGGCTTGCGGCCGGCGGCACCGGGATGAAGACCGAAGCCAGCCACGGCCC GGCCACCACCGCGACCATCGACGGCTTCAAGCTGACGCGAACGTTTCAGGCCAGCGACAAGTCCGGCACCATCCTGATCG CCCTCGGCCCCGCCGCCGCGCTGTCGCTGGCGTTCAAGGGGCTGGGCGAAGACGAAGCGCTGGCGACGGCGAAGAGTTTT GACTGGAAGGCGATGCGGGCGGCGGTGAAGTAG
Upstream 100 bases:
>100_bases CGTCGGATCGCTGCGACCTTCGGCGAGCGTGCACTCAGATCAATGCCGCGGCCGGCGGCCTTGCTAGGTTGCCGCCGCTG TCTCGGATTCGGAGGGTGTG
Downstream 100 bases:
>100_bases CGGGGGACCCGCATGAGCCAAGCGATATGCGGGTTCTGAGGTCACCAGCTACGCGAGCCATCGTGTAGGATGGGTTGAGC TCTTGCGAAACCCATCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MIARRRLFGLAVALPALVAAALAPSSPVRAGDGLEPYAPLLVELPGWKAGRLGGMAMQDGGSRIVVVQRGYARGEIHVSV QLLAGAPAQSRLAAGGTGMKTEASHGPATTATIDGFKLTRTFQASDKSGTILIALGPAAALSLAFKGLGEDEALATAKSF DWKAMRAAVK
Sequences:
>Translated_170_residues MIARRRLFGLAVALPALVAAALAPSSPVRAGDGLEPYAPLLVELPGWKAGRLGGMAMQDGGSRIVVVQRGYARGEIHVSV QLLAGAPAQSRLAAGGTGMKTEASHGPATTATIDGFKLTRTFQASDKSGTILIALGPAAALSLAFKGLGEDEALATAKSF DWKAMRAAVK >Mature_170_residues MIARRRLFGLAVALPALVAAALAPSSPVRAGDGLEPYAPLLVELPGWKAGRLGGMAMQDGGSRIVVVQRGYARGEIHVSV QLLAGAPAQSRLAAGGTGMKTEASHGPATTATIDGFKLTRTFQASDKSGTILIALGPAAALSLAFKGLGEDEALATAKSF DWKAMRAAVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17364; Mature: 17364
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIARRRLFGLAVALPALVAAALAPSSPVRAGDGLEPYAPLLVELPGWKAGRLGGMAMQDG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECC GSRIVVVQRGYARGEIHVSVQLLAGAPAQSRLAAGGTGMKTEASHGPATTATIDGFKLTR CCEEEEEECCCCCCEEEEEEEEEECCCCHHHEECCCCCCCCCCCCCCCCEEEECCEEEEE TFQASDKSGTILIALGPAAALSLAFKGLGEDEALATAKSFDWKAMRAAVK EEECCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure MIARRRLFGLAVALPALVAAALAPSSPVRAGDGLEPYAPLLVELPGWKAGRLGGMAMQDG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECC GSRIVVVQRGYARGEIHVSVQLLAGAPAQSRLAAGGTGMKTEASHGPATTATIDGFKLTR CCEEEEEECCCCCCEEEEEEEEEECCCCHHHEECCCCCCCCCCCCCCCCEEEECCEEEEE TFQASDKSGTILIALGPAAALSLAFKGLGEDEALATAKSFDWKAMRAAVK EEECCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA